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The map label for this gene is phaF [H]

Identifier: 78484405

GI number: 78484405

Start: 71558

End: 71827

Strand: Reverse

Name: phaF [H]

Synonym: Tcr_0059

Alternate gene names: 78484405

Gene position: 71827-71558 (Counterclockwise)

Preceding gene: 78484406

Following gene: 78484404

Centisome position: 2.96

GC content: 37.04

Gene sequence:

>270_bases
ATGTTAGAGATAGCCTTAGAACTCGCTTTTGTATTGGTTGCGCTGGCTTTGATTTTGAGCTTTTATCGATTGATTAAAGG
GCCTTCTATTCCAGATCGAATTTTAGCGTTAGACACACTGTATATTAATACCATTGCTTTATTGATTTTATTCGGCCTTT
ACTTAGGCAGTGCTTTATATTTTGAAGCGGCGTTGTTAATTGCTTTAATGGGCTTTGTTGGAACCGTGGCTTTAAGTAAA
TACTTATTGCGCGGCGACATTATGGAATAA

Upstream 100 bases:

>100_bases
AGCAATTACTTGTTCACGCTTTGCATATAGAAAATGCGGCCGAAACCATAGAAGAAATAAAACAACGCTATGAGCGTCCA
TTAATGGAGGTATTTCCATC

Downstream 100 bases:

>100_bases
AAGGAAAGTCAGATATGTTTGAAATTTTATTGGCATTGCTGATTATCGTCGGCGCTTCATTTACCCTGATCGGTTCGTTT
GGTTTATTCAAACTGCCTGA

Product: putative monovalent cation/H+ antiporter subunit F

Products: NA

Alternate protein names: pH adaptation potassium efflux system protein F; Pha system subunit F [H]

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MLEIALELAFVLVALALILSFYRLIKGPSIPDRILALDTLYINTIALLILFGLYLGSALYFEAALLIALMGFVGTVALSK
YLLRGDIME

Sequences:

>Translated_89_residues
MLEIALELAFVLVALALILSFYRLIKGPSIPDRILALDTLYINTIALLILFGLYLGSALYFEAALLIALMGFVGTVALSK
YLLRGDIME
>Mature_89_residues
MLEIALELAFVLVALALILSFYRLIKGPSIPDRILALDTLYINTIALLILFGLYLGSALYFEAALLIALMGFVGTVALSK
YLLRGDIME

Specific function: Part of a K(+) efflux system which is required for the adaptation of R.meliloti to alkaline pH as well as for the infection process during symbiotic nodule development [H]

COG id: COG2212

COG function: function code P; Multisubunit Na+/H+ antiporter, MnhF subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CPA3 antiporters (TC 2.A.63) subunit F family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007208 [H]

Pfam domain/function: PF04066 MrpF_PhaF [H]

EC number: NA

Molecular weight: Translated: 9765; Mature: 9765

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEIALELAFVLVALALILSFYRLIKGPSIPDRILALDTLYINTIALLILFGLYLGSALY
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FEAALLIALMGFVGTVALSKYLLRGDIME
HHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLEIALELAFVLVALALILSFYRLIKGPSIPDRILALDTLYINTIALLILFGLYLGSALY
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FEAALLIALMGFVGTVALSKYLLRGDIME
HHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680201; 11481430 [H]