| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358813
Identifier: 78358813
GI number: 78358813
Start: 3718264
End: 3718452
Strand: Reverse
Name: 78358813
Synonym: Dde_3775
Alternate gene names: NA
Gene position: 3718452-3718264 (Counterclockwise)
Preceding gene: 78358814
Following gene: 78358812
Centisome position: 99.68
GC content: 50.79
Gene sequence:
>189_bases ATGGGTTGGAATGTAACTGTTGATCACGACAAGTGCACCGGCGACGGCGAATGTGTAGACGTGTGCCCCGTTGAAGTTTA CGAACTTCAGGACGGCAAAGCAGCTGTTGTGAACGAAGAAGAATGCCTCGGCTGTGAATCCTGCGTCGAAGTCTGTGAAT CCGACGCAATCACCATCGAAGAAGTGTAA
Upstream 100 bases:
>100_bases ATGGTTAGCTGCCACAAGTCCGCGTCCAGCGGCTTTACGCGGCGCGGTTTACAAAAATCTGGGGTCATAAGACCCCGAGA AAAACGCCTGGAGGATTACC
Downstream 100 bases:
>100_bases GCTCGCTTTTTTTCGCAAGCATACGCGACATGCTGCCGGACGGCGGGCTTTATCCCGTCGTCCGGTCAGCATTTTCAGCA GGATATTCCCCGCATCCTGT
Product: ferredoxin I
Products: NA
Alternate protein names: Ferredoxin I; Fd I [H]
Number of amino acids: Translated: 62; Mature: 61
Protein sequence:
>62_residues MGWNVTVDHDKCTGDGECVDVCPVEVYELQDGKAAVVNEEECLGCESCVEVCESDAITIEEV
Sequences:
>Translated_62_residues MGWNVTVDHDKCTGDGECVDVCPVEVYELQDGKAAVVNEEECLGCESCVEVCESDAITIEEV >Mature_61_residues GWNVTVDHDKCTGDGECVDVCPVEVYELQDGKAAVVNEEECLGCESCVEVCESDAITIEEV
Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. This ferredoxin serves as a carrier for pyruvate dehydrogenase [H]
COG id: COG1146
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 [H]
Pfam domain/function: PF00037 Fer4 [H]
EC number: NA
Molecular weight: Translated: 6697; Mature: 6566
Theoretical pI: Translated: 3.45; Mature: 3.45
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
11.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 12.9 %Cys+Met (Translated Protein) 11.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 11.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWNVTVDHDKCTGDGECVDVCPVEVYELQDGKAAVVNEEECLGCESCVEVCESDAITIE CCCCEECCCCCCCCCCCEEEECCEEEEEECCCCEEEECCHHCCCHHHHHHHHCCCCEEEE EV EC >Mature Secondary Structure GWNVTVDHDKCTGDGECVDVCPVEVYELQDGKAAVVNEEECLGCESCVEVCESDAITIE CCCEECCCCCCCCCCCEEEECCEEEEEECCCCEEEECCHHCCCHHHHHHHHCCCCEEEE EV EC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3182762; 3360752 [H]