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The map label for this gene is rrf2 [H]

Identifier: 78358758

GI number: 78358758

Start: 3680327

End: 3680821

Strand: Reverse

Name: rrf2 [H]

Synonym: Dde_3719

Alternate gene names: 78358758

Gene position: 3680821-3680327 (Counterclockwise)

Preceding gene: 78358759

Following gene: 78358757

Centisome position: 98.68

GC content: 60.81

Gene sequence:

>495_bases
ATGCGCCTTCTGACCAACAGCCGGTATGGTACCCGCATGCTGCTTGATGTGGCGGTTCACGGCAGAAACGGGCCAGTGCT
GATGCGGGACGTGGCCGAGCGTCTGGGGGTTTCGCAGAAGTATCTTGAAAAGATTGCCCGCCAGCTGAAAGAGGCCGGTT
TTTTAAAGGCCCAGCGCGGGCCCAACGGGGGCCATACGCTGGCGCGTGATGTAACCACATTTACCGTGGGCGATGTGGTG
CGCCTGCTGGAAGGCGGCACAGACATCGTGGGCTGCGGGCGCGATGAAGAGGGCTGTACCCATGCGCCCGGCTGTCTTAC
CAGAATGCTCTGGAAAGAAGCGGGAATAGCCATGTTCGAGCGTCTTGACCGTTTCACATTTGCCGAGCTTGTGGCCTACT
CCGATCAGGGGGTGCGGTTCGGCGATTTCTGCCAGACCATCGAAGACGAGCACTGCAGGCACGCCTCGGGCAGCCGTGCC
AGAAAAGGCGCCTGA

Upstream 100 bases:

>100_bases
TACGGCATCGGGCAGGATGCCTTCGCGGCTGTCAGGGCCTTGCTTGTGTTTGGCCGCTGATATTGTGCGGCCTTGTAAGA
CCAAAAACGGAGGGGAAACA

Downstream 100 bases:

>100_bases
TGGTACCATTTGGTACCGTATTGCGCCGGAAGAATTCCGGTGTGTGAATGTCTTGCACCGGCGGGGCTTTTGTGGTTCTG
CCGTGCGGATGTTCCGCGCA

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MRLLTNSRYGTRMLLDVAVHGRNGPVLMRDVAERLGVSQKYLEKIARQLKEAGFLKAQRGPNGGHTLARDVTTFTVGDVV
RLLEGGTDIVGCGRDEEGCTHAPGCLTRMLWKEAGIAMFERLDRFTFAELVAYSDQGVRFGDFCQTIEDEHCRHASGSRA
RKGA

Sequences:

>Translated_164_residues
MRLLTNSRYGTRMLLDVAVHGRNGPVLMRDVAERLGVSQKYLEKIARQLKEAGFLKAQRGPNGGHTLARDVTTFTVGDVV
RLLEGGTDIVGCGRDEEGCTHAPGCLTRMLWKEAGIAMFERLDRFTFAELVAYSDQGVRFGDFCQTIEDEHCRHASGSRA
RKGA
>Mature_164_residues
MRLLTNSRYGTRMLLDVAVHGRNGPVLMRDVAERLGVSQKYLEKIARQLKEAGFLKAQRGPNGGHTLARDVTTFTVGDVV
RLLEGGTDIVGCGRDEEGCTHAPGCLTRMLWKEAGIAMFERLDRFTFAELVAYSDQGVRFGDFCQTIEDEHCRHASGSRA
RKGA

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=131, Percent_Identity=33.587786259542, Blast_Score=84, Evalue=6e-18,
Organism=Escherichia coli, GI1790621, Length=131, Percent_Identity=33.587786259542, Blast_Score=70, Evalue=9e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 18144; Mature: 18144

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLTNSRYGTRMLLDVAVHGRNGPVLMRDVAERLGVSQKYLEKIARQLKEAGFLKAQRG
CCCCCCCCCCHHEEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC
PNGGHTLARDVTTFTVGDVVRLLEGGTDIVGCGRDEEGCTHAPGCLTRMLWKEAGIAMFE
CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RLDRFTFAELVAYSDQGVRFGDFCQTIEDEHCRHASGSRARKGA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRLLTNSRYGTRMLLDVAVHGRNGPVLMRDVAERLGVSQKYLEKIARQLKEAGFLKAQRG
CCCCCCCCCCHHEEEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC
PNGGHTLARDVTTFTVGDVVRLLEGGTDIVGCGRDEEGCTHAPGCLTRMLWKEAGIAMFE
CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
RLDRFTFAELVAYSDQGVRFGDFCQTIEDEHCRHASGSRARKGA
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8335628 [H]