| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is fldA [C]
Identifier: 78358706
GI number: 78358706
Start: 3629019
End: 3629465
Strand: Reverse
Name: fldA [C]
Synonym: Dde_3667
Alternate gene names: 78358706
Gene position: 3629465-3629019 (Counterclockwise)
Preceding gene: 78358713
Following gene: 78358705
Centisome position: 97.3
GC content: 58.17
Gene sequence:
>447_bases ATGGCTAAAGTGCTTATCGTTTACGGTTCCACAACCGGAAACACCCAGACCACAGCCGAGATTGTGGGCACCGAACTGAA AAATGCAGGCCATGATGCCGTGGTAAACGATGTTACCGCAGTCGAGGCGGAAGGTCTGTGCGAGGGCTACGACGCTGTGC TCTTCGGCTGCTCCACATGGGGTGACGAGGAGATTGAACTGCAGGACGATTTCATCGACCTGTATGATGAACTGGACAAG GCCGGCCTGAGCGGCGTCAAGGTGGGCTGCTTCGGGTGCGGCGACTCCAGTTATCAGTGGTTCTGCGGCGCGGTGGACGC CATTGAAGAACGTGCAAAGGAAAACGGCGCGCGCATTATCTGCGATTCACTGAAGATTGACGGCGATCCCGGTTCGTGCC GCAGCGAGATAGCAGACTGGGCGTCGGCCGTCGGCGCAGCCCTGTAA
Upstream 100 bases:
>100_bases CGGCCGGCACCTTTGTTCATCTGTTCCGCCGTAGTGCACAGCCACTGTAGCATGCCCCCGATTGGCGGGGGCGTACAAAC TGTCACACGAGGTTTGCGAG
Downstream 100 bases:
>100_bases CAGATACCACAGCACAGGAGGCATCATGCAGCCCAAGTTGAGCATTCATTCCCGGGGAACCGCAAAAGGCTTTTTGCGGA GCGTTCTGCGCGGCGTTCTG
Product: flavodoxin, short chain
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MAKVLIVYGSTTGNTQTTAEIVGTELKNAGHDAVVNDVTAVEAEGLCEGYDAVLFGCSTWGDEEIELQDDFIDLYDELDK AGLSGVKVGCFGCGDSSYQWFCGAVDAIEERAKENGARIICDSLKIDGDPGSCRSEIADWASAVGAAL
Sequences:
>Translated_148_residues MAKVLIVYGSTTGNTQTTAEIVGTELKNAGHDAVVNDVTAVEAEGLCEGYDAVLFGCSTWGDEEIELQDDFIDLYDELDK AGLSGVKVGCFGCGDSSYQWFCGAVDAIEERAKENGARIICDSLKIDGDPGSCRSEIADWASAVGAAL >Mature_147_residues AKVLIVYGSTTGNTQTTAEIVGTELKNAGHDAVVNDVTAVEAEGLCEGYDAVLFGCSTWGDEEIELQDDFIDLYDELDKA GLSGVKVGCFGCGDSSYQWFCGAVDAIEERAKENGARIICDSLKIDGDPGSCRSEIADWASAVGAAL
Specific function: Low-potential electron donor to a number of redox enzymes [H]
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: 242 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010087 - InterPro: IPR001094 - InterPro: IPR008254 - InterPro: IPR001226 [H]
Pfam domain/function: PF00258 Flavodoxin_1 [H]
EC number: NA
Molecular weight: Translated: 15556; Mature: 15425
Theoretical pI: Translated: 3.76; Mature: 3.76
Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVLIVYGSTTGNTQTTAEIVGTELKNAGHDAVVNDVTAVEAEGLCEGYDAVLFGCSTW CCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHCHHHHCCCCCCCCCCEEEEECCCC GDEEIELQDDFIDLYDELDKAGLSGVKVGCFGCGDSSYQWFCGAVDAIEERAKENGARII CCCEEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEHHHHHHHHHHHHHCCCEEE CDSLKIDGDPGSCRSEIADWASAVGAAL EECEEECCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure AKVLIVYGSTTGNTQTTAEIVGTELKNAGHDAVVNDVTAVEAEGLCEGYDAVLFGCSTW CEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHCHHHHCCCCCCCCCCEEEEECCCC GDEEIELQDDFIDLYDELDKAGLSGVKVGCFGCGDSSYQWFCGAVDAIEERAKENGARII CCCEEEEHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEHHHHHHHHHHHHHCCCEEE CDSLKIDGDPGSCRSEIADWASAVGAAL EECEEECCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9562622 [H]