| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is perR [H]
Identifier: 78358713
GI number: 78358713
Start: 3634568
End: 3634957
Strand: Reverse
Name: perR [H]
Synonym: Dde_3674
Alternate gene names: 78358713
Gene position: 3634957-3634568 (Counterclockwise)
Preceding gene: 78358714
Following gene: 78358706
Centisome position: 97.45
GC content: 56.41
Gene sequence:
>390_bases ATGGCTGCACAGACAAGAATGACAAGGCAACGCAAGGTGATCCTTGACGAGTTGCGTAAAGTGACGAGCCACCCCACCGC AGATGAGATTTATGAGATGGTCCGCCCCATTCTGCCGCGTATCAGCCTGGGTACGGTATACCGCAATCTGGATCTGCTGG CGGAAACCGGTGAGATTCTGCGGCTTGAGCACGCAGGCGCCCAGAAACGCTTTGACGGCAACACGGCGCCGCATCAGCAT GTACGCTGCACAAAATGCGGCCGTGTGGGTGATGTGATGAAGCCGCTTGACGTGCCTGCTTTCAACCGCCTTGATGTGCC CGGTTTTACCGTGACCACAGCGCGGGTGGAGTTTGAGGGTATCTGCGACGAATGCATGACGAAAAACTGA
Upstream 100 bases:
>100_bases GGCGGACAGTATTTTCTGCGGTCGCGAGACCGCCGGTCCTTGACATTGCAGCGGCACTACTTTAGGAATGGTTATTATTA ATTAGTTGCTGGAGGCTTCC
Downstream 100 bases:
>100_bases TGCCGCGACTGCGCTGCAGCCGGCTGTGAACGGCTGCGGCGCAGCCCCGCGGTCATTTCGTTTTCCGCACACCGGCCACG GCTTTTTGTCGTATAAGGCC
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MAAQTRMTRQRKVILDELRKVTSHPTADEIYEMVRPILPRISLGTVYRNLDLLAETGEILRLEHAGAQKRFDGNTAPHQH VRCTKCGRVGDVMKPLDVPAFNRLDVPGFTVTTARVEFEGICDECMTKN
Sequences:
>Translated_129_residues MAAQTRMTRQRKVILDELRKVTSHPTADEIYEMVRPILPRISLGTVYRNLDLLAETGEILRLEHAGAQKRFDGNTAPHQH VRCTKCGRVGDVMKPLDVPAFNRLDVPGFTVTTARVEFEGICDECMTKN >Mature_128_residues AAQTRMTRQRKVILDELRKVTSHPTADEIYEMVRPILPRISLGTVYRNLDLLAETGEILRLEHAGAQKRFDGNTAPHQHV RCTKCGRVGDVMKPLDVPAFNRLDVPGFTVTTARVEFEGICDECMTKN
Specific function: Manganese-dependent repressor that controls a regulon of oxidative stress resistance and iron-storage proteins. May act as a hydrogen peroxide and organic hydroperoxide sensor [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 14579; Mature: 14448
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAQTRMTRQRKVILDELRKVTSHPTADEIYEMVRPILPRISLGTVYRNLDLLAETGEIL CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEE RLEHAGAQKRFDGNTAPHQHVRCTKCGRVGDVMKPLDVPAFNRLDVPGFTVTTARVEFEG EECCCCCCCCCCCCCCCCCCEEHHHCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEEHHHH ICDECMTKN HHHHHCCCC >Mature Secondary Structure AAQTRMTRQRKVILDELRKVTSHPTADEIYEMVRPILPRISLGTVYRNLDLLAETGEIL CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEE RLEHAGAQKRFDGNTAPHQHVRCTKCGRVGDVMKPLDVPAFNRLDVPGFTVTTARVEFEG EECCCCCCCCCCCCCCCCCCEEHHHCCCHHHHHCCCCCCCCCCCCCCCEEEEEEEEHHHH ICDECMTKN HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA