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The map label for this gene is ycjO [C]

Identifier: 78358697

GI number: 78358697

Start: 3621788

End: 3622906

Strand: Direct

Name: ycjO [C]

Synonym: Dde_3658

Alternate gene names: 78358697

Gene position: 3621788-3622906 (Clockwise)

Preceding gene: 78358696

Following gene: 78358698

Centisome position: 97.09

GC content: 59.52

Gene sequence:

>1119_bases
ATGGCCGACTTATCACGGGACAGATGGAAAGCACTCATCACGCTCATGCCGTCCGTCGTGCTCATTGCGGTGTTCGTTTA
CGGGTTTATCGGCGACACCATTTATATTTCGCTGACGGACTGGGGAAGAGGCGCCGCGCTGGCACTTGATCCGCAGATCA
ATTACATCGGTTTTGAAAACTATACCGAACTGTTCACCGGTTTCATCGACGGCCGCTTCCGGCAGGACATGGTCAACGCC
ATGTTCTACTCGGTGCTGCTGCTGGCCGGGGCCATCGGTCTGGGGCTGTTCATCGCCGTGCTGCTGGACAGAAAACCCGC
GGGCGAGGCCGTGCTGCGCACCATATTCCTGTATCCCATGGCGCTGTCTTTCATCGTCTCCGGCACCATCTGGCGCTGGC
TGCTCGCCCCGCAGGGCGGGGTCAACGTGCTGCCGACCTATTTCGGATTCGACAGACTGCAGTTCACATGGCTTACCAGC
AAGCAGACCGTGCTGCAGTTCAACTGGCAGAACCTGCTGCCGCTGCTTCTCTGTATCATGGCTGCGGTGCTCGTCCTGTC
CGGGTTCGGCTGTCTGCGCAGCAGGCCGCGGCGTGCCGCATGGTTTATGGGCTGCGGCGCCCTGCTTGGCCTGTTTGTGG
CCGTTGCGGGCAGCAGCTTGCCGCAGGCTCTGTTCATGGAAGAAACACACGGCTTCAATCTGGCCACGACGGGCATCATC
ATTGCCACCGTATGGCAGTATTCGGGTTACACCATGGCCCTGTATCTTGCGGGACTGCACGGCATATCGCAGGACCTCGC
CGACGCCGCCCAGCTGGACGGTGCCTCACAGTTCGCCTACTACCGGCATGTGGCCATCCCCATGCTGCGCCCCATAACCA
TCAGCGCCATCATCATTCTGTCGCACATCTCGCTCAAGATGTTCGACCTCATCTTTGCCATGACCGGCCCGGACAACGGT
GCCACAGGACATCCCGCGCTGCTCATGTATCTGACCACATTCAGGGCCAACGACTTTGCCAAGGGTGCTGCCATTGCCGT
GGTGCTGTTTCTGCTGGCGGCCATGTTCATCATTCCGTACCTTGTCAGTTCGTACCGCCGCAAAAGGAGGGGCTACTGA

Upstream 100 bases:

>100_bases
ATTGCCGTAAAAAACGGCATAGCCAGACGATAGCATACTGACCATTCACCGCGCCGGAGACCGGCAGGTCTCCGGCGCCA
CAGACGGGGTTTGCACAATA

Downstream 100 bases:

>100_bases
TGCACCGCACGTTTTCACCGGCGCGGGTGCTGCTGTATGCAGTGCTGTTTCTGCTGGCGGCCGTCTATATCACTCCGGCA
TACATGGCCCTTATCACCGC

Product: glucose transport system permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MADLSRDRWKALITLMPSVVLIAVFVYGFIGDTIYISLTDWGRGAALALDPQINYIGFENYTELFTGFIDGRFRQDMVNA
MFYSVLLLAGAIGLGLFIAVLLDRKPAGEAVLRTIFLYPMALSFIVSGTIWRWLLAPQGGVNVLPTYFGFDRLQFTWLTS
KQTVLQFNWQNLLPLLLCIMAAVLVLSGFGCLRSRPRRAAWFMGCGALLGLFVAVAGSSLPQALFMEETHGFNLATTGII
IATVWQYSGYTMALYLAGLHGISQDLADAAQLDGASQFAYYRHVAIPMLRPITISAIIILSHISLKMFDLIFAMTGPDNG
ATGHPALLMYLTTFRANDFAKGAAIAVVLFLLAAMFIIPYLVSSYRRKRRGY

Sequences:

>Translated_372_residues
MADLSRDRWKALITLMPSVVLIAVFVYGFIGDTIYISLTDWGRGAALALDPQINYIGFENYTELFTGFIDGRFRQDMVNA
MFYSVLLLAGAIGLGLFIAVLLDRKPAGEAVLRTIFLYPMALSFIVSGTIWRWLLAPQGGVNVLPTYFGFDRLQFTWLTS
KQTVLQFNWQNLLPLLLCIMAAVLVLSGFGCLRSRPRRAAWFMGCGALLGLFVAVAGSSLPQALFMEETHGFNLATTGII
IATVWQYSGYTMALYLAGLHGISQDLADAAQLDGASQFAYYRHVAIPMLRPITISAIIILSHISLKMFDLIFAMTGPDNG
ATGHPALLMYLTTFRANDFAKGAAIAVVLFLLAAMFIIPYLVSSYRRKRRGY
>Mature_371_residues
ADLSRDRWKALITLMPSVVLIAVFVYGFIGDTIYISLTDWGRGAALALDPQINYIGFENYTELFTGFIDGRFRQDMVNAM
FYSVLLLAGAIGLGLFIAVLLDRKPAGEAVLRTIFLYPMALSFIVSGTIWRWLLAPQGGVNVLPTYFGFDRLQFTWLTSK
QTVLQFNWQNLLPLLLCIMAAVLVLSGFGCLRSRPRRAAWFMGCGALLGLFVAVAGSSLPQALFMEETHGFNLATTGIII
ATVWQYSGYTMALYLAGLHGISQDLADAAQLDGASQFAYYRHVAIPMLRPITISAIIILSHISLKMFDLIFAMTGPDNGA
TGHPALLMYLTTFRANDFAKGAAIAVVLFLLAAMFIIPYLVSSYRRKRRGY

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 41100; Mature: 40969

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADLSRDRWKALITLMPSVVLIAVFVYGFIGDTIYISLTDWGRGAALALDPQINYIGFEN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEECCCCCEECCCH
YTELFTGFIDGRFRQDMVNAMFYSVLLLAGAIGLGLFIAVLLDRKPAGEAVLRTIFLYPM
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
ALSFIVSGTIWRWLLAPQGGVNVLPTYFGFDRLQFTWLTSKQTVLQFNWQNLLPLLLCIM
HHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHH
AAVLVLSGFGCLRSRPRRAAWFMGCGALLGLFVAVAGSSLPQALFMEETHGFNLATTGII
HHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHH
IATVWQYSGYTMALYLAGLHGISQDLADAAQLDGASQFAYYRHVAIPMLRPITISAIIIL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHH
SHISLKMFDLIFAMTGPDNGATGHPALLMYLTTFRANDFAKGAAIAVVLFLLAAMFIIPY
HHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
LVSSYRRKRRGY
HHHHHHHHHCCC
>Mature Secondary Structure 
ADLSRDRWKALITLMPSVVLIAVFVYGFIGDTIYISLTDWGRGAALALDPQINYIGFEN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCEEEECCCCCEECCCH
YTELFTGFIDGRFRQDMVNAMFYSVLLLAGAIGLGLFIAVLLDRKPAGEAVLRTIFLYPM
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
ALSFIVSGTIWRWLLAPQGGVNVLPTYFGFDRLQFTWLTSKQTVLQFNWQNLLPLLLCIM
HHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHH
AAVLVLSGFGCLRSRPRRAAWFMGCGALLGLFVAVAGSSLPQALFMEETHGFNLATTGII
HHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHH
IATVWQYSGYTMALYLAGLHGISQDLADAAQLDGASQFAYYRHVAIPMLRPITISAIIIL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHH
SHISLKMFDLIFAMTGPDNGATGHPALLMYLTTFRANDFAKGAAIAVVLFLLAAMFIIPY
HHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
LVSSYRRKRRGY
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]