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The map label for this gene is ycjP [C]

Identifier: 78358698

GI number: 78358698

Start: 3622906

End: 3623730

Strand: Direct

Name: ycjP [C]

Synonym: Dde_3659

Alternate gene names: 78358698

Gene position: 3622906-3623730 (Clockwise)

Preceding gene: 78358697

Following gene: 78358700

Centisome position: 97.12

GC content: 57.45

Gene sequence:

>825_bases
ATGCACCGCACGTTTTCACCGGCGCGGGTGCTGCTGTATGCAGTGCTGTTTCTGCTGGCGGCCGTCTATATCACTCCGGC
ATACATGGCCCTTATCACCGCGCTCAAGCATCCGGCCGAAATCAGCCTGACCACCGCATGGGAACTTCCCGCCACGGCCA
ACTGGAGCAGCTTTGCCGAAGCCGCACGCAAGCTGGGCCCCAACTTCATGAACAGCATAATCCTGACCGTATGCGCCACC
ATCGGCTCCACGGTGCTCGGCTCGCTGAACGGCTATGTTTTTTCCAAATGGAAGTTCAAGGGCAGCGAAGTGGTTTTCAC
CCTGTTTCTGTTCGGCATGTTCATTCCGTACCAGATCATTCTCATTCCGCTTTTTCAGCTGCTGCGCGACATGAACCTGT
ACGGCGGCCTGCCGGGGCTGATTCTGGCACACGTTGTCTACGGTCTGCCCATCACCACGCTGATCTTCCGGAATTTTTAC
AGCCAGATACCGACAACGCTTGTGGAATCTGCCCAGCTGGACGGCGCGGGATTCTTTTCCATATACCGGCATATCATCTT
TCCGCTGTCCATTCCGGGCTTTGTGGTGACCAGCCTGTGGCAGTGCACGCAGGTATGGAACGAATTTCTGTGGGGTATCT
GCCTGACAAAGCACACCTCCGCCCCCATGACCGTGGGACTGGCACAGCTGGCAGGCGGACAGGCCGTCAGCTGGAACCTG
CCCATGGCCGGTTCTGCCATTGCCGCACTGCCTGTGCTGATGATGTACATTCTGCTGGGCCGCTATTTCATCCGCGGACT
GCTGGCGGGTTCCGTCAAAGAATAA

Upstream 100 bases:

>100_bases
CCAAGGGTGCTGCCATTGCCGTGGTGCTGTTTCTGCTGGCGGCCATGTTCATCATTCCGTACCTTGTCAGTTCGTACCGC
CGCAAAAGGAGGGGCTACTG

Downstream 100 bases:

>100_bases
CGTCACCGGCATAAAAACAGACGGGCATTTCCGCCAAAGATGCCCGTCTGTTTTTATGCCGTGCGGAAACCCGCTGAAAA
TACGCCGCAGCGTGGCGGCA

Product: sugar ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MHRTFSPARVLLYAVLFLLAAVYITPAYMALITALKHPAEISLTTAWELPATANWSSFAEAARKLGPNFMNSIILTVCAT
IGSTVLGSLNGYVFSKWKFKGSEVVFTLFLFGMFIPYQIILIPLFQLLRDMNLYGGLPGLILAHVVYGLPITTLIFRNFY
SQIPTTLVESAQLDGAGFFSIYRHIIFPLSIPGFVVTSLWQCTQVWNEFLWGICLTKHTSAPMTVGLAQLAGGQAVSWNL
PMAGSAIAALPVLMMYILLGRYFIRGLLAGSVKE

Sequences:

>Translated_274_residues
MHRTFSPARVLLYAVLFLLAAVYITPAYMALITALKHPAEISLTTAWELPATANWSSFAEAARKLGPNFMNSIILTVCAT
IGSTVLGSLNGYVFSKWKFKGSEVVFTLFLFGMFIPYQIILIPLFQLLRDMNLYGGLPGLILAHVVYGLPITTLIFRNFY
SQIPTTLVESAQLDGAGFFSIYRHIIFPLSIPGFVVTSLWQCTQVWNEFLWGICLTKHTSAPMTVGLAQLAGGQAVSWNL
PMAGSAIAALPVLMMYILLGRYFIRGLLAGSVKE
>Mature_274_residues
MHRTFSPARVLLYAVLFLLAAVYITPAYMALITALKHPAEISLTTAWELPATANWSSFAEAARKLGPNFMNSIILTVCAT
IGSTVLGSLNGYVFSKWKFKGSEVVFTLFLFGMFIPYQIILIPLFQLLRDMNLYGGLPGLILAHVVYGLPITTLIFRNFY
SQIPTTLVESAQLDGAGFFSIYRHIIFPLSIPGFVVTSLWQCTQVWNEFLWGICLTKHTSAPMTVGLAQLAGGQAVSWNL
PMAGSAIAALPVLMMYILLGRYFIRGLLAGSVKE

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=283, Percent_Identity=27.9151943462898, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1789860, Length=209, Percent_Identity=23.444976076555, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790464, Length=210, Percent_Identity=25.7142857142857, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30170; Mature: 30170

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRTFSPARVLLYAVLFLLAAVYITPAYMALITALKHPAEISLTTAWELPATANWSSFAE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHH
AARKLGPNFMNSIILTVCATIGSTVLGSLNGYVFSKWKFKGSEVVFTLFLFGMFIPYQII
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH
LIPLFQLLRDMNLYGGLPGLILAHVVYGLPITTLIFRNFYSQIPTTLVESAQLDGAGFFS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
IYRHIIFPLSIPGFVVTSLWQCTQVWNEFLWGICLTKHTSAPMTVGLAQLAGGQAVSWNL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEECC
PMAGSAIAALPVLMMYILLGRYFIRGLLAGSVKE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHRTFSPARVLLYAVLFLLAAVYITPAYMALITALKHPAEISLTTAWELPATANWSSFAE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHH
AARKLGPNFMNSIILTVCATIGSTVLGSLNGYVFSKWKFKGSEVVFTLFLFGMFIPYQII
HHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH
LIPLFQLLRDMNLYGGLPGLILAHVVYGLPITTLIFRNFYSQIPTTLVESAQLDGAGFFS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
IYRHIIFPLSIPGFVVTSLWQCTQVWNEFLWGICLTKHTSAPMTVGLAQLAGGQAVSWNL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEECC
PMAGSAIAALPVLMMYILLGRYFIRGLLAGSVKE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]