| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is trpE(G) [H]
Identifier: 78358656
GI number: 78358656
Start: 3578329
End: 3578877
Strand: Direct
Name: trpE(G) [H]
Synonym: Dde_3617
Alternate gene names: 78358656
Gene position: 3578329-3578877 (Clockwise)
Preceding gene: 78358655
Following gene: 78358657
Centisome position: 95.93
GC content: 62.3
Gene sequence:
>549_bases ATGCTCCGCATACTGCTTTCCGACAACGACGACAGCTTCACCATGAATCTGGCGCACCTGCTGCACGCCGCCACAGGCAG CACCCCGCAGGTGGTCAACCATACGGCGCTGGCTGCCCGTGCCCCCGCAGCAGAGCAGGACCTTGTGGTCATATCTCCCG GTCCGGGGCATCCCGATGAATACCCGTGCTACGGGCCGGTGCTGCAAAGCGGCAGGCCGGTACTGGGCATATGTCTGGGC ATGCAGATTATCAACTGCCACTTCGGCGGCACGGTGAAAGCGCTGGCAGGGTGCGTGCACGGAAAATCCGACACCGTTGT GATGACCGATGCGGACAAGACCCTGACCGTGGGGCGCTATCACTCACTGCACTGCGCCACAACCGGAGCGGGACTGCAGG TCACGGGGCGTACGCCTCAGGGGCTTGTCATGGCGCTGCGGCATAATTCCCTGCCCCTGTACGGGTATCAGTTCCACCCC GAATCGTTTCTGACAGCCGAAGGAGTCTGGTGCATCCGCCATGCGCTGCGTTCTCTGCATATCCTGTGA
Upstream 100 bases:
>100_bases TGTGCACGTGGTCGCTGCCCGACATGTTCTTTTCATACCGCCGCGCCAAGGCTTCGGGCAGGCAGGCAGCCTTCATCTGG ATCGAGCGCTGAAAAACAAC
Downstream 100 bases:
>100_bases TCCGCGGTGCATTCCTCCGCTGCTGGATTTTCTGGCCCGGAGGCATCATGCCGACATGCTTCTTTCGGCACCTCCGGCCC GCGCAGAATCCTGTGCAGAC
Product: aminodeoxychorismate synthase, glutamine amidotransferase subunit
Products: NA
Alternate protein names: Glutamine amidotransferase [H]
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MLRILLSDNDDSFTMNLAHLLHAATGSTPQVVNHTALAARAPAAEQDLVVISPGPGHPDEYPCYGPVLQSGRPVLGICLG MQIINCHFGGTVKALAGCVHGKSDTVVMTDADKTLTVGRYHSLHCATTGAGLQVTGRTPQGLVMALRHNSLPLYGYQFHP ESFLTAEGVWCIRHALRSLHIL
Sequences:
>Translated_182_residues MLRILLSDNDDSFTMNLAHLLHAATGSTPQVVNHTALAARAPAAEQDLVVISPGPGHPDEYPCYGPVLQSGRPVLGICLG MQIINCHFGGTVKALAGCVHGKSDTVVMTDADKTLTVGRYHSLHCATTGAGLQVTGRTPQGLVMALRHNSLPLYGYQFHP ESFLTAEGVWCIRHALRSLHIL >Mature_182_residues MLRILLSDNDDSFTMNLAHLLHAATGSTPQVVNHTALAARAPAAEQDLVVISPGPGHPDEYPCYGPVLQSGRPVLGICLG MQIINCHFGGTVKALAGCVHGKSDTVVMTDADKTLTVGRYHSLHCATTGAGLQVTGRTPQGLVMALRHNSLPLYGYQFHP ESFLTAEGVWCIRHALRSLHIL
Specific function: Tryptophan biosynthesis; first step. Tryptophan biosynthesis; second step. [C]
COG id: COG0512
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787517, Length=188, Percent_Identity=36.7021276595745, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1789760, Length=177, Percent_Identity=38.9830508474576, Blast_Score=91, Evalue=4e-20, Organism=Saccharomyces cerevisiae, GI6322638, Length=187, Percent_Identity=35.8288770053476, Blast_Score=97, Evalue=1e-21, Organism=Drosophila melanogaster, GI281365319, Length=129, Percent_Identity=34.1085271317829, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: 945 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 900 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR006805 - InterPro: IPR006220 - InterPro: IPR010112 - InterPro: IPR015890 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR006221 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind; PF00117 GATase [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 19441; Mature: 19441
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRILLSDNDDSFTMNLAHLLHAATGSTPQVVNHTALAARAPAAEQDLVVISPGPGHPDE CEEEEEECCCCCEEHHHHHHHHHCCCCCCHHHCCHHHHHCCCCCCCCEEEECCCCCCCCC YPCYGPVLQSGRPVLGICLGMQIINCHFGGTVKALAGCVHGKSDTVVMTDADKTLTVGRY CCCCCHHHHCCCCEEEHEECEEEEEEECCCHHHHHHHHHCCCCCEEEEECCCCEEEECCE HSLHCATTGAGLQVTGRTPQGLVMALRHNSLPLYGYQFHPESFLTAEGVWCIRHALRSLH EEEEEEECCCCEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHC IL CC >Mature Secondary Structure MLRILLSDNDDSFTMNLAHLLHAATGSTPQVVNHTALAARAPAAEQDLVVISPGPGHPDE CEEEEEECCCCCEEHHHHHHHHHCCCCCCHHHCCHHHHHCCCCCCCCEEEECCCCCCCCC YPCYGPVLQSGRPVLGICLGMQIINCHFGGTVKALAGCVHGKSDTVVMTDADKTLTVGRY CCCCCHHHHCCCCEEEHEECEEEEEEECCCHHHHHHHHHCCCCCEEEEECCCCEEEECCE HSLHCATTGAGLQVTGRTPQGLVMALRHNSLPLYGYQFHPESFLTAEGVWCIRHALRSLH EEEEEEECCCCEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHC IL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8939798 [H]