| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78358580
Identifier: 78358580
GI number: 78358580
Start: 3502257
End: 3502472
Strand: Direct
Name: 78358580
Synonym: Dde_3541
Alternate gene names: NA
Gene position: 3502257-3502472 (Clockwise)
Preceding gene: 78358579
Following gene: 78358581
Centisome position: 93.89
GC content: 58.8
Gene sequence:
>216_bases ATGAGCACCATGAAGGTTCTGGACAAAGATTATTCACACTGGGTGTGCGCCCGCTGCGGGCAACCCCTGCAGCCCGCCAC CGTGGAACTGGAATATCTGGACAGCCTGTTCAACGTGGAACTGCCTGCCTGCGCCGCCTGCGGACTGGTGCTGATTCCCG AAGATCTGGCCACCGGTAAAATGGCGGATGTGGAAAGCCTGCTGGAGGACAAGTGA
Upstream 100 bases:
>100_bases ACTGGGTGGAGTTCACCCGGCACGATGAAAACACCTTCACGGTGCACAACGTGTGGAGCCACCGGATGCACGTGCGCACA GTCAACGGGAGAACACCGTC
Downstream 100 bases:
>100_bases CCTGCACCGGCACAGCACCGGCAGCTGCCTGCGAGCCGCTGTGGGCCCGTCCGGCCATGCGCGGAGCTTCGCCCGATGCA TGGCGCCCCGGCGGGCTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MSTMKVLDKDYSHWVCARCGQPLQPATVELEYLDSLFNVELPACAACGLVLIPEDLATGKMADVESLLEDK
Sequences:
>Translated_71_residues MSTMKVLDKDYSHWVCARCGQPLQPATVELEYLDSLFNVELPACAACGLVLIPEDLATGKMADVESLLEDK >Mature_70_residues STMKVLDKDYSHWVCARCGQPLQPATVELEYLDSLFNVELPACAACGLVLIPEDLATGKMADVESLLEDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7787; Mature: 7656
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 9.9 %Cys+Met (Translated Protein) 5.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTMKVLDKDYSHWVCARCGQPLQPATVELEYLDSLFNVELPACAACGLVLIPEDLATGK CCCHHHHHCCCCHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCCHHHCCEEEECCCCCCCC MADVESLLEDK HHHHHHHHCCC >Mature Secondary Structure STMKVLDKDYSHWVCARCGQPLQPATVELEYLDSLFNVELPACAACGLVLIPEDLATGK CCHHHHHCCCCHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCCHHHCCEEEECCCCCCCC MADVESLLEDK HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA