| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is aegA [H]
Identifier: 78358579
GI number: 78358579
Start: 3499750
End: 3502260
Strand: Direct
Name: aegA [H]
Synonym: Dde_3540
Alternate gene names: 78358579
Gene position: 3499750-3502260 (Clockwise)
Preceding gene: 78358578
Following gene: 78358580
Centisome position: 93.82
GC content: 65.07
Gene sequence:
>2511_bases ATGGAACAGGCCGAACTGCGCCGCTGGGAAGCACGCTGCACACAGGAAGAGCCGCCCCGATGCCGCGCCGCCTGCCCGCT GCACGTGGACGTGAAAGAATTCTGCACCCGCATGGCGGAAGAAAAATATGATCAGGCATGGGCCACACTGTGCCGCACCA TGCCCCTGCCCCGGGTGCTCGCCCGCATCTGCGACGGGCCGTGCCGCAGTGCCTGCATTCGCGGACAGGCAGGCGGCAGC ATAGAACTGCCGGCGCTGGAACACGTCTGCGCACAGCGGGCAACCCGCCAGCCGCGCATACTGCCCGCCCCTTCCCGCGG CAAAAAAGCCGCCGTGCTCGGATGCGATCTGGCCGGTCTTGCCGCCGCATGGGATATGACCAGAAAAGGCATTGCCGTCA CCATATACACGGACACCCCGCCCGCGGATGCGCTGGACGGTCTGCACATTCCCCCCGCTGCCGCAGACAGCATAGACAGC ATGCTGCAGCAAGAGCTGGACACCCTGCGCAGACTCGGCGCGGAAATACAGGAACACACAGAAATCACTTCCGGTCTGGC AGCCGGCTGTCTGGAAGAGTGCGGAGCCGTATTCATCACGCCCCGCGCCTATGACAGGCTCATGGCAGGCCTGCCGGAAC CGGACCCCCTGACGCTGGGCACGGCAACGCACGGCGTGTTTGCAGCACCGCCGCTGCCATGCTCCGTTACGGAGGGGGCT TCCCCCGTAGCCGCCGCGGCACAGGGCAGACGGGCGGCCACCTCTGTGGCCCGGCTGCACGAGGGAGCTTCACTGGTTGC GGGACGCGAACGCGAAGGCGTGTTTGAATCCACGCTGTTCACCAGTCTGGAAAAAGTACAACCCGCTCCGCCCGTGCCCG TACCCGCAGGCGGATACGACGCCACGCAGGCCCGTAACGAAGCAGCCCGCTGCCTGCGCTGTGAATGCATGGAATGTGTC AGGCATTGCGTCTTTCTGCAGGAATACGGCAGCTATCCGAAACAGTACGCCCGTCGCATATACAACAATGAATCCATCGT CATGGGTACGCGGCAGGCCAACACCATGATCAACTCATGCATGCAGTGCGGACTGTGCGCCACCCTGTGCCCCAACGGCT TTGATATGGGCGCGCTGTGTGCAGAGGCCCGGCAAAGCATGGTCCGCCGCGGCAAAATGCCCCCTTCGGCCCACGATTTC GCGCTCCGCGATATGGAATTTGCCAACGGAGAACACTGTACGCTGGCGCGCCACGCTCCGGACACGCAGGCAAGCGGCTG GGTGTTTTTCCCCGGATGCCAGCTTGCTGCTTCGGACCCGGACAGCATTCCCCGTACATGGGAATGGCTGCGGCGGCATC TGCCCCCATCATGCGGTACCGCGCAGAATCAGGGTGTGGGCCTGATGCTGCGCTGCTGCGGTGCTCCTGCACAATGGTCG GGCAGAAACGAACTGACCGCCGGCACCGTGGCCGCCCTGAAACAGGACTGGGAAAACCTCGGCTCTCCCGTCATCATTGC CGCCTGTCCCTCATGCGCCGTCATGCTGCGCAGCCATCTGCCGCAGGCAGACGTGACCGGACTGTGGGAAATCATGGACA GCCTGACTGACAGCCGGCCGGATATTCTGCAGCCGGCAACCGCAGACGGACACCCCGCCGTGGTGCTGCACGACCCATGC GGCACCCGCGAAGACGCCCCCATGCGACAGGCCGTAAGGTCGCTGCTGGAACGCTACGGCATAGCCGTGCACGAACCGGA ACTGACCGCGGAAACCACGGAATGCTGCGGTTTCGGCGGTCTGGCGGCAGAGGCCAATGCGGCACTGGGAAAAAAGATAA CAGAAGGCAGAGCGCTGCGGCTGGGGGCCCCCCCCGCACAAGGCAAGACAGCGGAAGCAGCCCCCTCCGGCACAGACCTG CAGGCCGATGCCGTGACCTATTGCGCCATGTGCCGCGACAGGCTTGCGGCGCACGGCAAACGCACAGCGCACCTGCTCGA CATTCTGCTGCCCGCGCAGGCTGACGCTCCCGCCATCGCCGCAGCCCCCCTGCCTTCCGCGCAGGAAGAGCCCGTCACCG GAACCCTGCCGGCCGACTGCTGCGCGCAAGGTTTTTCCGCCGCGGCACGGCATGCCCCCTCGCTTTCGGCACGGCATGAA AACAGAGCCAGACTGCGGGAATATCTGCTGACATCCTGCTGGGATGAAGCGCCTGCCGCCTCCGGCCCGCAGGCGGCGCT GGAAATACGCTACACGGCACAGGCCGCCGCACGCATGGAAGAGCGGCGTATTCTGGATGCCGACGTGCGCAAAGTGCTGC TGCATTCCCGCGACAACCGCTGGTTGCAGGATACGCGCAGCCCGCAGGGCCACCGGCTGGCATCGCTGCGGCCCGTTGTG GTCACCTACTGGGTGGAGTTCACCCGGCACGATGAAAACACCTTCACGGTGCACAACGTGTGGAGCCACCGGATGCACGT GCGCACAGTCAACGGGAGAACACCGTCATGA
Upstream 100 bases:
>100_bases CCATGCAGACGGCCCCCGCTCAGGGGCGGGGGCCGTCCTTTTTTTCCGCGCGTGTGCCGTAACGGTGCATGCGTGAACGA CGTTCCGGGGGACAGACGTT
Downstream 100 bases:
>100_bases GCACCATGAAGGTTCTGGACAAAGATTATTCACACTGGGTGTGCGCCCGCTGCGGGCAACCCCTGCAGCCCGCCACCGTG GAACTGGAATATCTGGACAG
Product: aldehyde dehydrogenase, iron-sulfur subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 836; Mature: 836
Protein sequence:
>836_residues MEQAELRRWEARCTQEEPPRCRAACPLHVDVKEFCTRMAEEKYDQAWATLCRTMPLPRVLARICDGPCRSACIRGQAGGS IELPALEHVCAQRATRQPRILPAPSRGKKAAVLGCDLAGLAAAWDMTRKGIAVTIYTDTPPADALDGLHIPPAAADSIDS MLQQELDTLRRLGAEIQEHTEITSGLAAGCLEECGAVFITPRAYDRLMAGLPEPDPLTLGTATHGVFAAPPLPCSVTEGA SPVAAAAQGRRAATSVARLHEGASLVAGREREGVFESTLFTSLEKVQPAPPVPVPAGGYDATQARNEAARCLRCECMECV RHCVFLQEYGSYPKQYARRIYNNESIVMGTRQANTMINSCMQCGLCATLCPNGFDMGALCAEARQSMVRRGKMPPSAHDF ALRDMEFANGEHCTLARHAPDTQASGWVFFPGCQLAASDPDSIPRTWEWLRRHLPPSCGTAQNQGVGLMLRCCGAPAQWS GRNELTAGTVAALKQDWENLGSPVIIAACPSCAVMLRSHLPQADVTGLWEIMDSLTDSRPDILQPATADGHPAVVLHDPC GTREDAPMRQAVRSLLERYGIAVHEPELTAETTECCGFGGLAAEANAALGKKITEGRALRLGAPPAQGKTAEAAPSGTDL QADAVTYCAMCRDRLAAHGKRTAHLLDILLPAQADAPAIAAAPLPSAQEEPVTGTLPADCCAQGFSAAARHAPSLSARHE NRARLREYLLTSCWDEAPAASGPQAALEIRYTAQAAARMEERRILDADVRKVLLHSRDNRWLQDTRSPQGHRLASLRPVV VTYWVEFTRHDENTFTVHNVWSHRMHVRTVNGRTPS
Sequences:
>Translated_836_residues MEQAELRRWEARCTQEEPPRCRAACPLHVDVKEFCTRMAEEKYDQAWATLCRTMPLPRVLARICDGPCRSACIRGQAGGS IELPALEHVCAQRATRQPRILPAPSRGKKAAVLGCDLAGLAAAWDMTRKGIAVTIYTDTPPADALDGLHIPPAAADSIDS MLQQELDTLRRLGAEIQEHTEITSGLAAGCLEECGAVFITPRAYDRLMAGLPEPDPLTLGTATHGVFAAPPLPCSVTEGA SPVAAAAQGRRAATSVARLHEGASLVAGREREGVFESTLFTSLEKVQPAPPVPVPAGGYDATQARNEAARCLRCECMECV RHCVFLQEYGSYPKQYARRIYNNESIVMGTRQANTMINSCMQCGLCATLCPNGFDMGALCAEARQSMVRRGKMPPSAHDF ALRDMEFANGEHCTLARHAPDTQASGWVFFPGCQLAASDPDSIPRTWEWLRRHLPPSCGTAQNQGVGLMLRCCGAPAQWS GRNELTAGTVAALKQDWENLGSPVIIAACPSCAVMLRSHLPQADVTGLWEIMDSLTDSRPDILQPATADGHPAVVLHDPC GTREDAPMRQAVRSLLERYGIAVHEPELTAETTECCGFGGLAAEANAALGKKITEGRALRLGAPPAQGKTAEAAPSGTDL QADAVTYCAMCRDRLAAHGKRTAHLLDILLPAQADAPAIAAAPLPSAQEEPVTGTLPADCCAQGFSAAARHAPSLSARHE NRARLREYLLTSCWDEAPAASGPQAALEIRYTAQAAARMEERRILDADVRKVLLHSRDNRWLQDTRSPQGHRLASLRPVV VTYWVEFTRHDENTFTVHNVWSHRMHVRTVNGRTPS >Mature_836_residues MEQAELRRWEARCTQEEPPRCRAACPLHVDVKEFCTRMAEEKYDQAWATLCRTMPLPRVLARICDGPCRSACIRGQAGGS IELPALEHVCAQRATRQPRILPAPSRGKKAAVLGCDLAGLAAAWDMTRKGIAVTIYTDTPPADALDGLHIPPAAADSIDS MLQQELDTLRRLGAEIQEHTEITSGLAAGCLEECGAVFITPRAYDRLMAGLPEPDPLTLGTATHGVFAAPPLPCSVTEGA SPVAAAAQGRRAATSVARLHEGASLVAGREREGVFESTLFTSLEKVQPAPPVPVPAGGYDATQARNEAARCLRCECMECV RHCVFLQEYGSYPKQYARRIYNNESIVMGTRQANTMINSCMQCGLCATLCPNGFDMGALCAEARQSMVRRGKMPPSAHDF ALRDMEFANGEHCTLARHAPDTQASGWVFFPGCQLAASDPDSIPRTWEWLRRHLPPSCGTAQNQGVGLMLRCCGAPAQWS GRNELTAGTVAALKQDWENLGSPVIIAACPSCAVMLRSHLPQADVTGLWEIMDSLTDSRPDILQPATADGHPAVVLHDPC GTREDAPMRQAVRSLLERYGIAVHEPELTAETTECCGFGGLAAEANAALGKKITEGRALRLGAPPAQGKTAEAAPSGTDL QADAVTYCAMCRDRLAAHGKRTAHLLDILLPAQADAPAIAAAPLPSAQEEPVTGTLPADCCAQGFSAAARHAPSLSARHE NRARLREYLLTSCWDEAPAASGPQAALEIRYTAQAAARMEERRILDADVRKVLLHSRDNRWLQDTRSPQGHRLASLRPVV VTYWVEFTRHDENTFTVHNVWSHRMHVRTVNGRTPS
Specific function: Unknown
COG id: COG0493
COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Escherichia coli, GI1788811, Length=216, Percent_Identity=26.8518518518519, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI87082180, Length=206, Percent_Identity=28.6407766990291, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1789606, Length=238, Percent_Identity=26.0504201680672, Blast_Score=71, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6320030, Length=188, Percent_Identity=26.5957446808511, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013027 - InterPro: IPR012285 - InterPro: IPR006006 [H]
Pfam domain/function: PF00037 Fer4; PF07992 Pyr_redox_2 [H]
EC number: NA
Molecular weight: Translated: 90348; Mature: 90348
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQAELRRWEARCTQEEPPRCRAACPLHVDVKEFCTRMAEEKYDQAWATLCRTMPLPRVL CCHHHHHHHHHHCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH ARICDGPCRSACIRGQAGGSIELPALEHVCAQRATRQPRILPAPSRGKKAAVLGCDLAGL HHHCCCHHHHHHHCCCCCCCEECHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHH AAAWDMTRKGIAVTIYTDTPPADALDGLHIPPAAADSIDSMLQQELDTLRRLGAEIQEHT HHHHHHHCCCEEEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EITSGLAAGCLEECGAVFITPRAYDRLMAGLPEPDPLTLGTATHGVFAAPPLPCSVTEGA HHHHHHHHHHHHHCCEEEECHHHHHHHHHCCCCCCCEEECCCCCCCEECCCCCCCCCCCC SPVAAAAQGRRAATSVARLHEGASLVAGREREGVFESTLFTSLEKVQPAPPVPVPAGGYD CHHHHHHCCHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC ATQARNEAARCLRCECMECVRHCVFLQEYGSYPKQYARRIYNNESIVMGTRQANTMINSC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECHHHHHHHHHH MQCGLCATLCPNGFDMGALCAEARQSMVRRGKMPPSAHDFALRDMEFANGEHCTLARHAP HHHCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEECCCC DTQASGWVFFPGCQLAASDPDSIPRTWEWLRRHLPPSCGTAQNQGVGLMLRCCGAPAQWS CCCCCCEEEECCCEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCC GRNELTAGTVAALKQDWENLGSPVIIAACPSCAVMLRSHLPQADVTGLWEIMDSLTDSRP CCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC DILQPATADGHPAVVLHDPCGTREDAPMRQAVRSLLERYGIAVHEPELTAETTECCGFGG CCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCHHHHCCCCC LAAEANAALGKKITEGRALRLGAPPAQGKTAEAAPSGTDLQADAVTYCAMCRDRLAAHGK CHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC RTAHLLDILLPAQADAPAIAAAPLPSAQEEPVTGTLPADCCAQGFSAAARHAPSLSARHE HHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH NRARLREYLLTSCWDEAPAASGPQAALEIRYTAQAAARMEERRILDADVRKVLLHSRDNR HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC WLQDTRSPQGHRLASLRPVVVTYWVEFTRHDENTFTVHNVWSHRMHVRTVNGRTPS HHHHCCCCCCCCHHHCCHHHHEEHHHHHCCCCCEEEEEEHHCCCEEEEEECCCCCC >Mature Secondary Structure MEQAELRRWEARCTQEEPPRCRAACPLHVDVKEFCTRMAEEKYDQAWATLCRTMPLPRVL CCHHHHHHHHHHCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH ARICDGPCRSACIRGQAGGSIELPALEHVCAQRATRQPRILPAPSRGKKAAVLGCDLAGL HHHCCCHHHHHHHCCCCCCCEECHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHH AAAWDMTRKGIAVTIYTDTPPADALDGLHIPPAAADSIDSMLQQELDTLRRLGAEIQEHT HHHHHHHCCCEEEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH EITSGLAAGCLEECGAVFITPRAYDRLMAGLPEPDPLTLGTATHGVFAAPPLPCSVTEGA HHHHHHHHHHHHHCCEEEECHHHHHHHHHCCCCCCCEEECCCCCCCEECCCCCCCCCCCC SPVAAAAQGRRAATSVARLHEGASLVAGREREGVFESTLFTSLEKVQPAPPVPVPAGGYD CHHHHHHCCHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC ATQARNEAARCLRCECMECVRHCVFLQEYGSYPKQYARRIYNNESIVMGTRQANTMINSC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECHHHHHHHHHH MQCGLCATLCPNGFDMGALCAEARQSMVRRGKMPPSAHDFALRDMEFANGEHCTLARHAP HHHCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEECCCC DTQASGWVFFPGCQLAASDPDSIPRTWEWLRRHLPPSCGTAQNQGVGLMLRCCGAPAQWS CCCCCCEEEECCCEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCC GRNELTAGTVAALKQDWENLGSPVIIAACPSCAVMLRSHLPQADVTGLWEIMDSLTDSRP CCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC DILQPATADGHPAVVLHDPCGTREDAPMRQAVRSLLERYGIAVHEPELTAETTECCGFGG CCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCHHHHCCCCC LAAEANAALGKKITEGRALRLGAPPAQGKTAEAAPSGTDLQADAVTYCAMCRDRLAAHGK CHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC RTAHLLDILLPAQADAPAIAAAPLPSAQEEPVTGTLPADCCAQGFSAAARHAPSLSARHE HHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH NRARLREYLLTSCWDEAPAASGPQAALEIRYTAQAAARMEERRILDADVRKVLLHSRDNR HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC WLQDTRSPQGHRLASLRPVVVTYWVEFTRHDENTFTVHNVWSHRMHVRTVNGRTPS HHHHCCCCCCCCHHHCCHHHHEEHHHHHCCCCCEEEEEEHHCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8955321; 9205837; 9278503 [H]