Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

Click here to switch to the map view.

The map label for this gene is aegA [H]

Identifier: 78358579

GI number: 78358579

Start: 3499750

End: 3502260

Strand: Direct

Name: aegA [H]

Synonym: Dde_3540

Alternate gene names: 78358579

Gene position: 3499750-3502260 (Clockwise)

Preceding gene: 78358578

Following gene: 78358580

Centisome position: 93.82

GC content: 65.07

Gene sequence:

>2511_bases
ATGGAACAGGCCGAACTGCGCCGCTGGGAAGCACGCTGCACACAGGAAGAGCCGCCCCGATGCCGCGCCGCCTGCCCGCT
GCACGTGGACGTGAAAGAATTCTGCACCCGCATGGCGGAAGAAAAATATGATCAGGCATGGGCCACACTGTGCCGCACCA
TGCCCCTGCCCCGGGTGCTCGCCCGCATCTGCGACGGGCCGTGCCGCAGTGCCTGCATTCGCGGACAGGCAGGCGGCAGC
ATAGAACTGCCGGCGCTGGAACACGTCTGCGCACAGCGGGCAACCCGCCAGCCGCGCATACTGCCCGCCCCTTCCCGCGG
CAAAAAAGCCGCCGTGCTCGGATGCGATCTGGCCGGTCTTGCCGCCGCATGGGATATGACCAGAAAAGGCATTGCCGTCA
CCATATACACGGACACCCCGCCCGCGGATGCGCTGGACGGTCTGCACATTCCCCCCGCTGCCGCAGACAGCATAGACAGC
ATGCTGCAGCAAGAGCTGGACACCCTGCGCAGACTCGGCGCGGAAATACAGGAACACACAGAAATCACTTCCGGTCTGGC
AGCCGGCTGTCTGGAAGAGTGCGGAGCCGTATTCATCACGCCCCGCGCCTATGACAGGCTCATGGCAGGCCTGCCGGAAC
CGGACCCCCTGACGCTGGGCACGGCAACGCACGGCGTGTTTGCAGCACCGCCGCTGCCATGCTCCGTTACGGAGGGGGCT
TCCCCCGTAGCCGCCGCGGCACAGGGCAGACGGGCGGCCACCTCTGTGGCCCGGCTGCACGAGGGAGCTTCACTGGTTGC
GGGACGCGAACGCGAAGGCGTGTTTGAATCCACGCTGTTCACCAGTCTGGAAAAAGTACAACCCGCTCCGCCCGTGCCCG
TACCCGCAGGCGGATACGACGCCACGCAGGCCCGTAACGAAGCAGCCCGCTGCCTGCGCTGTGAATGCATGGAATGTGTC
AGGCATTGCGTCTTTCTGCAGGAATACGGCAGCTATCCGAAACAGTACGCCCGTCGCATATACAACAATGAATCCATCGT
CATGGGTACGCGGCAGGCCAACACCATGATCAACTCATGCATGCAGTGCGGACTGTGCGCCACCCTGTGCCCCAACGGCT
TTGATATGGGCGCGCTGTGTGCAGAGGCCCGGCAAAGCATGGTCCGCCGCGGCAAAATGCCCCCTTCGGCCCACGATTTC
GCGCTCCGCGATATGGAATTTGCCAACGGAGAACACTGTACGCTGGCGCGCCACGCTCCGGACACGCAGGCAAGCGGCTG
GGTGTTTTTCCCCGGATGCCAGCTTGCTGCTTCGGACCCGGACAGCATTCCCCGTACATGGGAATGGCTGCGGCGGCATC
TGCCCCCATCATGCGGTACCGCGCAGAATCAGGGTGTGGGCCTGATGCTGCGCTGCTGCGGTGCTCCTGCACAATGGTCG
GGCAGAAACGAACTGACCGCCGGCACCGTGGCCGCCCTGAAACAGGACTGGGAAAACCTCGGCTCTCCCGTCATCATTGC
CGCCTGTCCCTCATGCGCCGTCATGCTGCGCAGCCATCTGCCGCAGGCAGACGTGACCGGACTGTGGGAAATCATGGACA
GCCTGACTGACAGCCGGCCGGATATTCTGCAGCCGGCAACCGCAGACGGACACCCCGCCGTGGTGCTGCACGACCCATGC
GGCACCCGCGAAGACGCCCCCATGCGACAGGCCGTAAGGTCGCTGCTGGAACGCTACGGCATAGCCGTGCACGAACCGGA
ACTGACCGCGGAAACCACGGAATGCTGCGGTTTCGGCGGTCTGGCGGCAGAGGCCAATGCGGCACTGGGAAAAAAGATAA
CAGAAGGCAGAGCGCTGCGGCTGGGGGCCCCCCCCGCACAAGGCAAGACAGCGGAAGCAGCCCCCTCCGGCACAGACCTG
CAGGCCGATGCCGTGACCTATTGCGCCATGTGCCGCGACAGGCTTGCGGCGCACGGCAAACGCACAGCGCACCTGCTCGA
CATTCTGCTGCCCGCGCAGGCTGACGCTCCCGCCATCGCCGCAGCCCCCCTGCCTTCCGCGCAGGAAGAGCCCGTCACCG
GAACCCTGCCGGCCGACTGCTGCGCGCAAGGTTTTTCCGCCGCGGCACGGCATGCCCCCTCGCTTTCGGCACGGCATGAA
AACAGAGCCAGACTGCGGGAATATCTGCTGACATCCTGCTGGGATGAAGCGCCTGCCGCCTCCGGCCCGCAGGCGGCGCT
GGAAATACGCTACACGGCACAGGCCGCCGCACGCATGGAAGAGCGGCGTATTCTGGATGCCGACGTGCGCAAAGTGCTGC
TGCATTCCCGCGACAACCGCTGGTTGCAGGATACGCGCAGCCCGCAGGGCCACCGGCTGGCATCGCTGCGGCCCGTTGTG
GTCACCTACTGGGTGGAGTTCACCCGGCACGATGAAAACACCTTCACGGTGCACAACGTGTGGAGCCACCGGATGCACGT
GCGCACAGTCAACGGGAGAACACCGTCATGA

Upstream 100 bases:

>100_bases
CCATGCAGACGGCCCCCGCTCAGGGGCGGGGGCCGTCCTTTTTTTCCGCGCGTGTGCCGTAACGGTGCATGCGTGAACGA
CGTTCCGGGGGACAGACGTT

Downstream 100 bases:

>100_bases
GCACCATGAAGGTTCTGGACAAAGATTATTCACACTGGGTGTGCGCCCGCTGCGGGCAACCCCTGCAGCCCGCCACCGTG
GAACTGGAATATCTGGACAG

Product: aldehyde dehydrogenase, iron-sulfur subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 836; Mature: 836

Protein sequence:

>836_residues
MEQAELRRWEARCTQEEPPRCRAACPLHVDVKEFCTRMAEEKYDQAWATLCRTMPLPRVLARICDGPCRSACIRGQAGGS
IELPALEHVCAQRATRQPRILPAPSRGKKAAVLGCDLAGLAAAWDMTRKGIAVTIYTDTPPADALDGLHIPPAAADSIDS
MLQQELDTLRRLGAEIQEHTEITSGLAAGCLEECGAVFITPRAYDRLMAGLPEPDPLTLGTATHGVFAAPPLPCSVTEGA
SPVAAAAQGRRAATSVARLHEGASLVAGREREGVFESTLFTSLEKVQPAPPVPVPAGGYDATQARNEAARCLRCECMECV
RHCVFLQEYGSYPKQYARRIYNNESIVMGTRQANTMINSCMQCGLCATLCPNGFDMGALCAEARQSMVRRGKMPPSAHDF
ALRDMEFANGEHCTLARHAPDTQASGWVFFPGCQLAASDPDSIPRTWEWLRRHLPPSCGTAQNQGVGLMLRCCGAPAQWS
GRNELTAGTVAALKQDWENLGSPVIIAACPSCAVMLRSHLPQADVTGLWEIMDSLTDSRPDILQPATADGHPAVVLHDPC
GTREDAPMRQAVRSLLERYGIAVHEPELTAETTECCGFGGLAAEANAALGKKITEGRALRLGAPPAQGKTAEAAPSGTDL
QADAVTYCAMCRDRLAAHGKRTAHLLDILLPAQADAPAIAAAPLPSAQEEPVTGTLPADCCAQGFSAAARHAPSLSARHE
NRARLREYLLTSCWDEAPAASGPQAALEIRYTAQAAARMEERRILDADVRKVLLHSRDNRWLQDTRSPQGHRLASLRPVV
VTYWVEFTRHDENTFTVHNVWSHRMHVRTVNGRTPS

Sequences:

>Translated_836_residues
MEQAELRRWEARCTQEEPPRCRAACPLHVDVKEFCTRMAEEKYDQAWATLCRTMPLPRVLARICDGPCRSACIRGQAGGS
IELPALEHVCAQRATRQPRILPAPSRGKKAAVLGCDLAGLAAAWDMTRKGIAVTIYTDTPPADALDGLHIPPAAADSIDS
MLQQELDTLRRLGAEIQEHTEITSGLAAGCLEECGAVFITPRAYDRLMAGLPEPDPLTLGTATHGVFAAPPLPCSVTEGA
SPVAAAAQGRRAATSVARLHEGASLVAGREREGVFESTLFTSLEKVQPAPPVPVPAGGYDATQARNEAARCLRCECMECV
RHCVFLQEYGSYPKQYARRIYNNESIVMGTRQANTMINSCMQCGLCATLCPNGFDMGALCAEARQSMVRRGKMPPSAHDF
ALRDMEFANGEHCTLARHAPDTQASGWVFFPGCQLAASDPDSIPRTWEWLRRHLPPSCGTAQNQGVGLMLRCCGAPAQWS
GRNELTAGTVAALKQDWENLGSPVIIAACPSCAVMLRSHLPQADVTGLWEIMDSLTDSRPDILQPATADGHPAVVLHDPC
GTREDAPMRQAVRSLLERYGIAVHEPELTAETTECCGFGGLAAEANAALGKKITEGRALRLGAPPAQGKTAEAAPSGTDL
QADAVTYCAMCRDRLAAHGKRTAHLLDILLPAQADAPAIAAAPLPSAQEEPVTGTLPADCCAQGFSAAARHAPSLSARHE
NRARLREYLLTSCWDEAPAASGPQAALEIRYTAQAAARMEERRILDADVRKVLLHSRDNRWLQDTRSPQGHRLASLRPVV
VTYWVEFTRHDENTFTVHNVWSHRMHVRTVNGRTPS
>Mature_836_residues
MEQAELRRWEARCTQEEPPRCRAACPLHVDVKEFCTRMAEEKYDQAWATLCRTMPLPRVLARICDGPCRSACIRGQAGGS
IELPALEHVCAQRATRQPRILPAPSRGKKAAVLGCDLAGLAAAWDMTRKGIAVTIYTDTPPADALDGLHIPPAAADSIDS
MLQQELDTLRRLGAEIQEHTEITSGLAAGCLEECGAVFITPRAYDRLMAGLPEPDPLTLGTATHGVFAAPPLPCSVTEGA
SPVAAAAQGRRAATSVARLHEGASLVAGREREGVFESTLFTSLEKVQPAPPVPVPAGGYDATQARNEAARCLRCECMECV
RHCVFLQEYGSYPKQYARRIYNNESIVMGTRQANTMINSCMQCGLCATLCPNGFDMGALCAEARQSMVRRGKMPPSAHDF
ALRDMEFANGEHCTLARHAPDTQASGWVFFPGCQLAASDPDSIPRTWEWLRRHLPPSCGTAQNQGVGLMLRCCGAPAQWS
GRNELTAGTVAALKQDWENLGSPVIIAACPSCAVMLRSHLPQADVTGLWEIMDSLTDSRPDILQPATADGHPAVVLHDPC
GTREDAPMRQAVRSLLERYGIAVHEPELTAETTECCGFGGLAAEANAALGKKITEGRALRLGAPPAQGKTAEAAPSGTDL
QADAVTYCAMCRDRLAAHGKRTAHLLDILLPAQADAPAIAAAPLPSAQEEPVTGTLPADCCAQGFSAAARHAPSLSARHE
NRARLREYLLTSCWDEAPAASGPQAALEIRYTAQAAARMEERRILDADVRKVLLHSRDNRWLQDTRSPQGHRLASLRPVV
VTYWVEFTRHDENTFTVHNVWSHRMHVRTVNGRTPS

Specific function: Unknown

COG id: COG0493

COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788811, Length=216, Percent_Identity=26.8518518518519, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI87082180, Length=206, Percent_Identity=28.6407766990291, Blast_Score=72, Evalue=2e-13,
Organism=Escherichia coli, GI1789606, Length=238, Percent_Identity=26.0504201680672, Blast_Score=71, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6320030, Length=188, Percent_Identity=26.5957446808511, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR013027
- InterPro:   IPR012285
- InterPro:   IPR006006 [H]

Pfam domain/function: PF00037 Fer4; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 90348; Mature: 90348

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQAELRRWEARCTQEEPPRCRAACPLHVDVKEFCTRMAEEKYDQAWATLCRTMPLPRVL
CCHHHHHHHHHHCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
ARICDGPCRSACIRGQAGGSIELPALEHVCAQRATRQPRILPAPSRGKKAAVLGCDLAGL
HHHCCCHHHHHHHCCCCCCCEECHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHH
AAAWDMTRKGIAVTIYTDTPPADALDGLHIPPAAADSIDSMLQQELDTLRRLGAEIQEHT
HHHHHHHCCCEEEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EITSGLAAGCLEECGAVFITPRAYDRLMAGLPEPDPLTLGTATHGVFAAPPLPCSVTEGA
HHHHHHHHHHHHHCCEEEECHHHHHHHHHCCCCCCCEEECCCCCCCEECCCCCCCCCCCC
SPVAAAAQGRRAATSVARLHEGASLVAGREREGVFESTLFTSLEKVQPAPPVPVPAGGYD
CHHHHHHCCHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
ATQARNEAARCLRCECMECVRHCVFLQEYGSYPKQYARRIYNNESIVMGTRQANTMINSC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECHHHHHHHHHH
MQCGLCATLCPNGFDMGALCAEARQSMVRRGKMPPSAHDFALRDMEFANGEHCTLARHAP
HHHCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEECCCC
DTQASGWVFFPGCQLAASDPDSIPRTWEWLRRHLPPSCGTAQNQGVGLMLRCCGAPAQWS
CCCCCCEEEECCCEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCC
GRNELTAGTVAALKQDWENLGSPVIIAACPSCAVMLRSHLPQADVTGLWEIMDSLTDSRP
CCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
DILQPATADGHPAVVLHDPCGTREDAPMRQAVRSLLERYGIAVHEPELTAETTECCGFGG
CCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCHHHHCCCCC
LAAEANAALGKKITEGRALRLGAPPAQGKTAEAAPSGTDLQADAVTYCAMCRDRLAAHGK
CHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
RTAHLLDILLPAQADAPAIAAAPLPSAQEEPVTGTLPADCCAQGFSAAARHAPSLSARHE
HHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH
NRARLREYLLTSCWDEAPAASGPQAALEIRYTAQAAARMEERRILDADVRKVLLHSRDNR
HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WLQDTRSPQGHRLASLRPVVVTYWVEFTRHDENTFTVHNVWSHRMHVRTVNGRTPS
HHHHCCCCCCCCHHHCCHHHHEEHHHHHCCCCCEEEEEEHHCCCEEEEEECCCCCC
>Mature Secondary Structure
MEQAELRRWEARCTQEEPPRCRAACPLHVDVKEFCTRMAEEKYDQAWATLCRTMPLPRVL
CCHHHHHHHHHHCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
ARICDGPCRSACIRGQAGGSIELPALEHVCAQRATRQPRILPAPSRGKKAAVLGCDLAGL
HHHCCCHHHHHHHCCCCCCCEECHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHH
AAAWDMTRKGIAVTIYTDTPPADALDGLHIPPAAADSIDSMLQQELDTLRRLGAEIQEHT
HHHHHHHCCCEEEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EITSGLAAGCLEECGAVFITPRAYDRLMAGLPEPDPLTLGTATHGVFAAPPLPCSVTEGA
HHHHHHHHHHHHHCCEEEECHHHHHHHHHCCCCCCCEEECCCCCCCEECCCCCCCCCCCC
SPVAAAAQGRRAATSVARLHEGASLVAGREREGVFESTLFTSLEKVQPAPPVPVPAGGYD
CHHHHHHCCHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
ATQARNEAARCLRCECMECVRHCVFLQEYGSYPKQYARRIYNNESIVMGTRQANTMINSC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECHHHHHHHHHH
MQCGLCATLCPNGFDMGALCAEARQSMVRRGKMPPSAHDFALRDMEFANGEHCTLARHAP
HHHCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEECCCC
DTQASGWVFFPGCQLAASDPDSIPRTWEWLRRHLPPSCGTAQNQGVGLMLRCCGAPAQWS
CCCCCCEEEECCCEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCC
GRNELTAGTVAALKQDWENLGSPVIIAACPSCAVMLRSHLPQADVTGLWEIMDSLTDSRP
CCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
DILQPATADGHPAVVLHDPCGTREDAPMRQAVRSLLERYGIAVHEPELTAETTECCGFGG
CCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCHHHHCCCCC
LAAEANAALGKKITEGRALRLGAPPAQGKTAEAAPSGTDLQADAVTYCAMCRDRLAAHGK
CHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
RTAHLLDILLPAQADAPAIAAAPLPSAQEEPVTGTLPADCCAQGFSAAARHAPSLSARHE
HHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH
NRARLREYLLTSCWDEAPAASGPQAALEIRYTAQAAARMEERRILDADVRKVLLHSRDNR
HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
WLQDTRSPQGHRLASLRPVVVTYWVEFTRHDENTFTVHNVWSHRMHVRTVNGRTPS
HHHHCCCCCCCCHHHCCHHHHEEHHHHHCCCCCEEEEEEHHCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8955321; 9205837; 9278503 [H]