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The map label for this gene is fdhB [H]

Identifier: 78358567

GI number: 78358567

Start: 3487219

End: 3488181

Strand: Direct

Name: fdhB [H]

Synonym: Dde_3528

Alternate gene names: 78358567

Gene position: 3487219-3488181 (Clockwise)

Preceding gene: 78358566

Following gene: 78358568

Centisome position: 93.49

GC content: 62.31

Gene sequence:

>963_bases
ATGCCGCAACTTGAATCTCTGAAAGACGCCATCGCAAAGGCACTGCCCGAACTGGACGTGGTTATCGCATGGGGGCGCGG
GCTGGATGCGCTGGGCGCCACGCCGCTGTTCATCACCAAGCCGGAAGACCTCGACGACATGATCCTCGGCCCCTCGTGCG
TTCACAATCTTGCCACCTATCTGCCCGGTCTCAGGGACAGAAAGGTGGGCATAGTGGTCAAAGGCTGCGACAGCCGTTCT
GTTATTGAACTGCTGCAGGAAGGTCTGGTGGACCGCGACAACCTGACTGTTTTCGGTTTTGCGTGCTCCGGCGTGGTCAA
CGTGCCGCGTCTGCGCGGTGCCGCCGACAGACACCCCGTGCAGAGCATGGAACACGGCAGCGGACAGGTGCGCCTGCAGA
CGGACACCGGCCCCGTAGCGCTGCCGGAAGCGGAAGCGCTGGCCGCCAAATGCCTGACGTGTACCGAGCCGGAAGCGCTC
ATCTGCGACCACTTTGCCGGACCGCACGGCACGGCTGAACGTGCCGCCGTCTCCGGAAACCCTCAGGGAACGCTGGAGCG
GCTGGAAGCCATGGACTTTGAAAGCCGTTTCCGCTTCTGGGAACAGGAAATGAGCCGCTGCCTGCGCTGCTACGCCTGCC
GCAGTGCCTGCCCGCTGTGCGTGTGTCAGGATCACTGCGCCGCACAAAGCCGCAATCCGCACTGGGTGACACAGGAAGAC
ACCCCGCGTGAAAAACTGATGTTTCAGGCTATCCACGCCCTGCACCTTGCAGGACGGTGCACGGAATGCGGCGAATGCGA
ACGGGCCTGCCCCATGGATATTCCGGTGCTGGCGCTCAAGCAGGCGCTGAACAGAGAAATACACCGGCTGTTCGACTACC
GCGCGGGCACAGACCCGCAGGCAACCCCGCCGCTGTTCCACTTCAAGGAAACCGAAGAGAACATCAAAGAAAGGGACTGG
TGA

Upstream 100 bases:

>100_bases
CAGATTCACGGACTGGGGCCTGCTCCCGCCTTTGCGCAGGAAGCTTCCGAACAGGCACAGGCCGTTCTGAAAGCCGTCAT
CTAACCGCGAGGAGTACACG

Downstream 100 bases:

>100_bases
TGGCAACGACCTTGTTCATACAACGCGGCGACATTGCCGCATGGCTGGCGGACACGGCTGCCACGCACACGGTGTACGCA
CCGCTGCGCGACAAGACAGG

Product: hydrogenase, iron-sulfur cluster-binding subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MPQLESLKDAIAKALPELDVVIAWGRGLDALGATPLFITKPEDLDDMILGPSCVHNLATYLPGLRDRKVGIVVKGCDSRS
VIELLQEGLVDRDNLTVFGFACSGVVNVPRLRGAADRHPVQSMEHGSGQVRLQTDTGPVALPEAEALAAKCLTCTEPEAL
ICDHFAGPHGTAERAAVSGNPQGTLERLEAMDFESRFRFWEQEMSRCLRCYACRSACPLCVCQDHCAAQSRNPHWVTQED
TPREKLMFQAIHALHLAGRCTECGECERACPMDIPVLALKQALNREIHRLFDYRAGTDPQATPPLFHFKETEENIKERDW

Sequences:

>Translated_320_residues
MPQLESLKDAIAKALPELDVVIAWGRGLDALGATPLFITKPEDLDDMILGPSCVHNLATYLPGLRDRKVGIVVKGCDSRS
VIELLQEGLVDRDNLTVFGFACSGVVNVPRLRGAADRHPVQSMEHGSGQVRLQTDTGPVALPEAEALAAKCLTCTEPEAL
ICDHFAGPHGTAERAAVSGNPQGTLERLEAMDFESRFRFWEQEMSRCLRCYACRSACPLCVCQDHCAAQSRNPHWVTQED
TPREKLMFQAIHALHLAGRCTECGECERACPMDIPVLALKQALNREIHRLFDYRAGTDPQATPPLFHFKETEENIKERDW
>Mature_319_residues
PQLESLKDAIAKALPELDVVIAWGRGLDALGATPLFITKPEDLDDMILGPSCVHNLATYLPGLRDRKVGIVVKGCDSRSV
IELLQEGLVDRDNLTVFGFACSGVVNVPRLRGAADRHPVQSMEHGSGQVRLQTDTGPVALPEAEALAAKCLTCTEPEALI
CDHFAGPHGTAERAAVSGNPQGTLERLEAMDFESRFRFWEQEMSRCLRCYACRSACPLCVCQDHCAAQSRNPHWVTQEDT
PREKLMFQAIHALHLAGRCTECGECERACPMDIPVLALKQALNREIHRLFDYRAGTDPQATPPLFHFKETEENIKERDW

Specific function: Catalyzes the oxidation of formate [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR007516
- InterPro:   IPR007525
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF04432 FrhB_FdhB_C; PF04422 FrhB_FdhB_N [H]

EC number: =1.2.1.2 [H]

Molecular weight: Translated: 35427; Mature: 35296

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQLESLKDAIAKALPELDVVIAWGRGLDALGATPLFITKPEDLDDMILGPSCVHNLATY
CCCHHHHHHHHHHHCCCCEEEEEECCCCHHHCCCCEEEECCCCCHHHHCCHHHHHHHHHH
LPGLRDRKVGIVVKGCDSRSVIELLQEGLVDRDNLTVFGFACSGVVNVPRLRGAADRHPV
CCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHCCCCCCCCH
QSMEHGSGQVRLQTDTGPVALPEAEALAAKCLTCTEPEALICDHFAGPHGTAERAAVSGN
HHHHCCCCEEEEEECCCCEECCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHCCCCC
PQGTLERLEAMDFESRFRFWEQEMSRCLRCYACRSACPLCVCQDHCAAQSRNPHWVTQED
CHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHCCCCCCCCCCCC
TPREKLMFQAIHALHLAGRCTECGECERACPMDIPVLALKQALNREIHRLFDYRAGTDPQ
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
ATPPLFHFKETEENIKERDW
CCCCCEECHHHHHHHHHCCC
>Mature Secondary Structure 
PQLESLKDAIAKALPELDVVIAWGRGLDALGATPLFITKPEDLDDMILGPSCVHNLATY
CCHHHHHHHHHHHCCCCEEEEEECCCCHHHCCCCEEEECCCCCHHHHCCHHHHHHHHHH
LPGLRDRKVGIVVKGCDSRSVIELLQEGLVDRDNLTVFGFACSGVVNVPRLRGAADRHPV
CCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHCCCCCCCCH
QSMEHGSGQVRLQTDTGPVALPEAEALAAKCLTCTEPEALICDHFAGPHGTAERAAVSGN
HHHHCCCCEEEEEECCCCEECCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHCCCCC
PQGTLERLEAMDFESRFRFWEQEMSRCLRCYACRSACPLCVCQDHCAAQSRNPHWVTQED
CHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHCCCCCCCCCCCC
TPREKLMFQAIHALHLAGRCTECGECERACPMDIPVLALKQALNREIHRLFDYRAGTDPQ
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
ATPPLFHFKETEENIKERDW
CCCCCEECHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9006048 [H]