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The map label for this gene is fdhD [H]

Identifier: 78358555

GI number: 78358555

Start: 3476696

End: 3477580

Strand: Direct

Name: fdhD [H]

Synonym: Dde_3516

Alternate gene names: 78358555

Gene position: 3476696-3477580 (Clockwise)

Preceding gene: 78358554

Following gene: 78358557

Centisome position: 93.2

GC content: 63.39

Gene sequence:

>885_bases
ATGCATACCAGAAGCAGGCGCATCACCAGACTGAATCAGGGTCTGAGGCGTTTTTCCGACGATGAGATAATCATCGAAGC
CCCCATGGAGATAGTGGTCAACGGCGTGCCGTGGGCCGCTCTCATGCGCACCCCCGGCGACGATGAGGCGCTGGCACTGG
GGTATTGCCATACGGAAGGACTGCTGCAGCAGGGCGAACCGTACAGCATGAACCGGTGCACCGCCGCGGACGGCACGATG
CGGATGCTGCTGGAAATTCAGGGCGGCCCGCGGCGCGTGCAGGAAATGATGCGCGGCAGAGGCGTGCGCATGGGTTTTTC
CTGCTGCGGCAACCGTAACGCCGTCAGTGCGCAGGAACTTGTCCGGACTCTGCCCCCCGTGCCTTCCTCCGGCCCGGCAG
ACAACAAAGAGGCTTTCCGGGTGGCACCGGAAACACTCAATGCCCTGCTGCGCGAGGCGGAAGGCTATCAGGCGCTATTC
AGCCGGACCGGCGGCACTCATTTCTGCGCGCTGTATGACGGGCAGCTGACCATGCTGGCCTTTGCCGAAGACACGGGCAG
GCACAACGCACTGGACAAAGCAGCCGGACAGGCCCTGATGCAGGGCACGGCGGCAGACGTGCATCTGGTGCTGCTCTCGT
CAAGGCTCAGCTTCGAGATGGTACAGAAATCGCTGGCTCTCAAGGCCCGGGTGGTGGCAGGGCTGTCCGCCGTGACCAGC
ATGGGGACGGAACTTGCGGAAGCCTCGGGCATCACGCTTGTGGGTTTTCTGCGCAGCGGCAGAATGAACATCTATACACA
TGCACAGCGCATGGTCGCCGCATGCGACGGCACGACCCCGTGCAGCGGTCCGGCAGAAAGCTGTCCGCTGCGCCGCCCGT
CATGA

Upstream 100 bases:

>100_bases
ATCTTGTGGCCGCCCGTGAAGGACTGATGCCGCTGGCCCCGTCATTCTGGAACACATTTGACGACGAATAACCTGCCCCG
CAGCAACGGAACCCGTTAAT

Downstream 100 bases:

>100_bases
CCGGACAACAGCCGTTTCTTACACGGTATGCAGCACCACGGAGAGCGGTTTAAAAAAAAATTCCGCGGTCATACCCTTTA
CGCCGGGTGCTGCCACATCC

Product: formate dehydrogenase family accessory protein FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MHTRSRRITRLNQGLRRFSDDEIIIEAPMEIVVNGVPWAALMRTPGDDEALALGYCHTEGLLQQGEPYSMNRCTAADGTM
RMLLEIQGGPRRVQEMMRGRGVRMGFSCCGNRNAVSAQELVRTLPPVPSSGPADNKEAFRVAPETLNALLREAEGYQALF
SRTGGTHFCALYDGQLTMLAFAEDTGRHNALDKAAGQALMQGTAADVHLVLLSSRLSFEMVQKSLALKARVVAGLSAVTS
MGTELAEASGITLVGFLRSGRMNIYTHAQRMVAACDGTTPCSGPAESCPLRRPS

Sequences:

>Translated_294_residues
MHTRSRRITRLNQGLRRFSDDEIIIEAPMEIVVNGVPWAALMRTPGDDEALALGYCHTEGLLQQGEPYSMNRCTAADGTM
RMLLEIQGGPRRVQEMMRGRGVRMGFSCCGNRNAVSAQELVRTLPPVPSSGPADNKEAFRVAPETLNALLREAEGYQALF
SRTGGTHFCALYDGQLTMLAFAEDTGRHNALDKAAGQALMQGTAADVHLVLLSSRLSFEMVQKSLALKARVVAGLSAVTS
MGTELAEASGITLVGFLRSGRMNIYTHAQRMVAACDGTTPCSGPAESCPLRRPS
>Mature_294_residues
MHTRSRRITRLNQGLRRFSDDEIIIEAPMEIVVNGVPWAALMRTPGDDEALALGYCHTEGLLQQGEPYSMNRCTAADGTM
RMLLEIQGGPRRVQEMMRGRGVRMGFSCCGNRNAVSAQELVRTLPPVPSSGPADNKEAFRVAPETLNALLREAEGYQALF
SRTGGTHFCALYDGQLTMLAFAEDTGRHNALDKAAGQALMQGTAADVHLVLLSSRLSFEMVQKSLALKARVVAGLSAVTS
MGTELAEASGITLVGFLRSGRMNIYTHAQRMVAACDGTTPCSGPAESCPLRRPS

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=253, Percent_Identity=31.6205533596838, Blast_Score=119, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 31746; Mature: 31746

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTRSRRITRLNQGLRRFSDDEIIIEAPMEIVVNGVPWAALMRTPGDDEALALGYCHTEG
CCCCHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCHHHHCCCCCCCCEEEEEEECHHH
LLQQGEPYSMNRCTAADGTMRMLLEIQGGPRRVQEMMRGRGVRMGFSCCGNRNAVSAQEL
HHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCEECHHHCCCCCCCCHHHH
VRTLPPVPSSGPADNKEAFRVAPETLNALLREAEGYQALFSRTGGTHFCALYDGQLTMLA
HHHCCCCCCCCCCCCCHHEEECHHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCEEEEE
FAEDTGRHNALDKAAGQALMQGTAADVHLVLLSSRLSFEMVQKSLALKARVVAGLSAVTS
EECCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGTELAEASGITLVGFLRSGRMNIYTHAQRMVAACDGTTPCSGPAESCPLRRPS
HHHHHHHHCCCEEEEEECCCCEEEHHHHHHHHHHCCCCCCCCCCHHCCCCCCCC
>Mature Secondary Structure
MHTRSRRITRLNQGLRRFSDDEIIIEAPMEIVVNGVPWAALMRTPGDDEALALGYCHTEG
CCCCHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCHHHHCCCCCCCCEEEEEEECHHH
LLQQGEPYSMNRCTAADGTMRMLLEIQGGPRRVQEMMRGRGVRMGFSCCGNRNAVSAQEL
HHHCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCEECHHHCCCCCCCCHHHH
VRTLPPVPSSGPADNKEAFRVAPETLNALLREAEGYQALFSRTGGTHFCALYDGQLTMLA
HHHCCCCCCCCCCCCCHHEEECHHHHHHHHHHCCHHHHHHHCCCCCEEEEEECCCEEEEE
FAEDTGRHNALDKAAGQALMQGTAADVHLVLLSSRLSFEMVQKSLALKARVVAGLSAVTS
EECCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGTELAEASGITLVGFLRSGRMNIYTHAQRMVAACDGTTPCSGPAESCPLRRPS
HHHHHHHHCCCEEEEEECCCCEEEHHHHHHHHHHCCCCCCCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572948; 12692562 [H]