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The map label for this gene is fdhE [H]

Identifier: 78358554

GI number: 78358554

Start: 3475743

End: 3476666

Strand: Direct

Name: fdhE [H]

Synonym: Dde_3515

Alternate gene names: 78358554

Gene position: 3475743-3476666 (Clockwise)

Preceding gene: 78358553

Following gene: 78358555

Centisome position: 93.18

GC content: 63.85

Gene sequence:

>924_bases
ATGCCACAATCACGCGAATCAGTCAGTGCCACTCTGAACGCCATTGCCTCACGCCGTCCGGCGCTGCACTCCATACTCAG
CGCATTCGAACCGCTGCTTACCGCCAGCGCAGCCCTGCCGGACGCTCTGGCGGATGAACTGCGCAACGGCACAGCCCCCC
TGCCGCAGGCCCGGTCTGAAAGGCTGGCACAGGGCGTGCCCGTCATGGCAGACGCCCCGACACAGTGGGCCGCGCCGCTC
ATGCGCGTTGCAGCACGGCACCTGCTGCCCGTCATAACCGCGCACCAGTCGCTGGCCGGCTCGCGCGCAGGGCTGGAAAA
AGCCTTCGATCAGGATGATACCGCTCTGGCCGGCCTCATGTCCGCCATCGTGCACGGCGACGCCGGTGCCCTCACACGCG
CCGCCCGGCAGCACGACGTACCCGAAGCGGTCTTTGCTTTTGCCGCAAACGCGGTTGCCGGTCCGGCACTGCACGCCATG
ACGCAGCACCACCTGCACGACGCTGATTTTGCCGCGTGGCGTGAAGGAACATGCCCTGTCTGCGGCTCATTTCCTTCCAT
CGCGTATCTGGGAAGGCCAGACCCTGACCAGTCGGAATTTCTGCGCAGCGGCGGCGGCAAAAAGCATCTGCACTGTTCCC
TGTGCACGCACGAATGGCTGTTCAGACGCGGAGCCTGTCCTTCGTGCGGCAACGAAGACCCCGGAGCGCTGGAATACCTG
CGCGACCCGCAGACCCCGTGGGAACGCATAGACCTGTGCCGCAAATGCAACACCTACTGCCCGGGAGTCGATCTGCGCGA
AACCACGGAAAATCCCCAGATGGATGCCATGGCACTGGGTATGCTGCATCTTGATCTTGTGGCCGCCCGTGAAGGACTGA
TGCCGCTGGCCCCGTCATTCTGGAACACATTTGACGACGAATAA

Upstream 100 bases:

>100_bases
TCGCTGCGGCGTCCCGTGCGGGCCATGACGGAAAACAGCTAGGACCGAACAACAGCCCGGAAGGCCGCTTACCCGGCCTT
CCGGCTTTACCGGAGCACGA

Downstream 100 bases:

>100_bases
CCTGCCCCGCAGCAACGGAACCCGTTAATATGCATACCAGAAGCAGGCGCATCACCAGACTGAATCAGGGTCTGAGGCGT
TTTTCCGACGATGAGATAAT

Product: formate dehydrogenase formation protein FdhE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MPQSRESVSATLNAIASRRPALHSILSAFEPLLTASAALPDALADELRNGTAPLPQARSERLAQGVPVMADAPTQWAAPL
MRVAARHLLPVITAHQSLAGSRAGLEKAFDQDDTALAGLMSAIVHGDAGALTRAARQHDVPEAVFAFAANAVAGPALHAM
TQHHLHDADFAAWREGTCPVCGSFPSIAYLGRPDPDQSEFLRSGGGKKHLHCSLCTHEWLFRRGACPSCGNEDPGALEYL
RDPQTPWERIDLCRKCNTYCPGVDLRETTENPQMDAMALGMLHLDLVAAREGLMPLAPSFWNTFDDE

Sequences:

>Translated_307_residues
MPQSRESVSATLNAIASRRPALHSILSAFEPLLTASAALPDALADELRNGTAPLPQARSERLAQGVPVMADAPTQWAAPL
MRVAARHLLPVITAHQSLAGSRAGLEKAFDQDDTALAGLMSAIVHGDAGALTRAARQHDVPEAVFAFAANAVAGPALHAM
TQHHLHDADFAAWREGTCPVCGSFPSIAYLGRPDPDQSEFLRSGGGKKHLHCSLCTHEWLFRRGACPSCGNEDPGALEYL
RDPQTPWERIDLCRKCNTYCPGVDLRETTENPQMDAMALGMLHLDLVAAREGLMPLAPSFWNTFDDE
>Mature_306_residues
PQSRESVSATLNAIASRRPALHSILSAFEPLLTASAALPDALADELRNGTAPLPQARSERLAQGVPVMADAPTQWAAPLM
RVAARHLLPVITAHQSLAGSRAGLEKAFDQDDTALAGLMSAIVHGDAGALTRAARQHDVPEAVFAFAANAVAGPALHAMT
QHHLHDADFAAWREGTCPVCGSFPSIAYLGRPDPDQSEFLRSGGGKKHLHCSLCTHEWLFRRGACPSCGNEDPGALEYLR
DPQTPWERIDLCRKCNTYCPGVDLRETTENPQMDAMALGMLHLDLVAAREGLMPLAPSFWNTFDDE

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG3058

COG function: function code O; Uncharacterized protein involved in formate dehydrogenase formation

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006452 [H]

Pfam domain/function: PF04216 FdhE [H]

EC number: NA

Molecular weight: Translated: 33039; Mature: 32907

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQSRESVSATLNAIASRRPALHSILSAFEPLLTASAALPDALADELRNGTAPLPQARSE
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHH
RLAQGVPVMADAPTQWAAPLMRVAARHLLPVITAHQSLAGSRAGLEKAFDQDDTALAGLM
HHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
SAIVHGDAGALTRAARQHDVPEAVFAFAANAVAGPALHAMTQHHLHDADFAAWREGTCPV
HHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCC
CGSFPSIAYLGRPDPDQSEFLRSGGGKKHLHCSLCTHEWLFRRGACPSCGNEDPGALEYL
CCCCCCEEECCCCCCCHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHH
RDPQTPWERIDLCRKCNTYCPGVDLRETTENPQMDAMALGMLHLDLVAAREGLMPLAPSF
CCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH
WNTFDDE
HHCCCCC
>Mature Secondary Structure 
PQSRESVSATLNAIASRRPALHSILSAFEPLLTASAALPDALADELRNGTAPLPQARSE
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHH
RLAQGVPVMADAPTQWAAPLMRVAARHLLPVITAHQSLAGSRAGLEKAFDQDDTALAGLM
HHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
SAIVHGDAGALTRAARQHDVPEAVFAFAANAVAGPALHAMTQHHLHDADFAAWREGTCPV
HHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCC
CGSFPSIAYLGRPDPDQSEFLRSGGGKKHLHCSLCTHEWLFRRGACPSCGNEDPGALEYL
CCCCCCEEECCCCCCCHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHH
RDPQTPWERIDLCRKCNTYCPGVDLRETTENPQMDAMALGMLHLDLVAAREGLMPLAPSF
CCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHH
WNTFDDE
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]