| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358550
Identifier: 78358550
GI number: 78358550
Start: 3471230
End: 3471697
Strand: Direct
Name: 78358550
Synonym: Dde_3511
Alternate gene names: NA
Gene position: 3471230-3471697 (Clockwise)
Preceding gene: 78358549
Following gene: 78358551
Centisome position: 93.06
GC content: 58.76
Gene sequence:
>468_bases ATGCCAAAAAAGACACAACAACCTGTCATGCGCCTGCACCTGTGGCTCGAACAGTCCGATGGCGTGCTTTTCGGTCAGGG GCGGCTGCAGCTGCTCGAATACATAGACCAGACAGGCTCCATAAACGCGGCGGCCAAGCGGCTGGGCATGTCCTACCGCG CGGCGTGGGGTAAAATAAAAGCCTCGGAAGAAGCGCTGGGTTTCAAACTGCTGGAACAGCCCGAAGGAAGACGTTCCGGC TGCCGGCTCAGCGATGCGGCGCGCATGCTGATGACCGGCTACCGTAACTGGCTGGATGAAGTGGAAGCTCTGGCGCTGCA AAAGGCCGAAGAACATCTGGGCTACATGCCCGAACGGTTTATAAACCGGCACGGAGCCTGTGCCCTGACACCGCGGCATG CCCCCGCAGCTAAAAAGAAAAACACACCATCACAGGCGGCTGTGGAAAAATCCGCCTCCGCACACTGA
Upstream 100 bases:
>100_bases TAATATGCTCAACAAGACATAACATCCATTGTATTGTCTGCTTCAAGCTGTTCCGCGTGGTTCACAGCCGTGCACCACGG GAAAGCCCGCGGAGGTAAAT
Downstream 100 bases:
>100_bases GGCACCTTGCGGTATGCATTGCTCCGCACGCCGTTGTGTTAATATTAACACATTATAATAACTGACTTTTTATTGACCAA ACATTTCCTGACGTGGCATC
Product: Fis family transcriptional regulator
Products: NA
Alternate protein names: ModE Family Transcriptional Regulator; Molybdenum Transport Regulatory Protein ModE; Regulatory Protein LysR; Fis Family Transcriptional Regulator; Transcriptional Regulator LysR; ModE Repressor Domain Protein; Molybdate Transport Repressor; NUDIX Hydrolase; Regulatory Protein Lysr Family
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MPKKTQQPVMRLHLWLEQSDGVLFGQGRLQLLEYIDQTGSINAAAKRLGMSYRAAWGKIKASEEALGFKLLEQPEGRRSG CRLSDAARMLMTGYRNWLDEVEALALQKAEEHLGYMPERFINRHGACALTPRHAPAAKKKNTPSQAAVEKSASAH
Sequences:
>Translated_155_residues MPKKTQQPVMRLHLWLEQSDGVLFGQGRLQLLEYIDQTGSINAAAKRLGMSYRAAWGKIKASEEALGFKLLEQPEGRRSG CRLSDAARMLMTGYRNWLDEVEALALQKAEEHLGYMPERFINRHGACALTPRHAPAAKKKNTPSQAAVEKSASAH >Mature_154_residues PKKTQQPVMRLHLWLEQSDGVLFGQGRLQLLEYIDQTGSINAAAKRLGMSYRAAWGKIKASEEALGFKLLEQPEGRRSGC RLSDAARMLMTGYRNWLDEVEALALQKAEEHLGYMPERFINRHGACALTPRHAPAAKKKNTPSQAAVEKSASAH
Specific function: Unknown
COG id: COG2005
COG function: function code R; N-terminal domain of molybdenum-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17286; Mature: 17155
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKKTQQPVMRLHLWLEQSDGVLFGQGRLQLLEYIDQTGSINAAAKRLGMSYRAAWGKIK CCCCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHCCC ASEEALGFKLLEQPEGRRSGCRLSDAARMLMTGYRNWLDEVEALALQKAEEHLGYMPERF CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH INRHGACALTPRHAPAAKKKNTPSQAAVEKSASAH HCCCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure PKKTQQPVMRLHLWLEQSDGVLFGQGRLQLLEYIDQTGSINAAAKRLGMSYRAAWGKIK CCCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHCCC ASEEALGFKLLEQPEGRRSGCRLSDAARMLMTGYRNWLDEVEALALQKAEEHLGYMPERF CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH INRHGACALTPRHAPAAKKKNTPSQAAVEKSASAH HCCCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA