Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

Click here to switch to the map view.

The map label for this gene is 78358418

Identifier: 78358418

GI number: 78358418

Start: 3346725

End: 3347156

Strand: Direct

Name: 78358418

Synonym: Dde_3378

Alternate gene names: NA

Gene position: 3346725-3347156 (Clockwise)

Preceding gene: 78358417

Following gene: 78358419

Centisome position: 89.72

GC content: 61.11

Gene sequence:

>432_bases
ATGTACTGCGAACGAGACGACCTGCACGACTACATTCCTGCCGCGTATCTGGATGCGGCAGACAAGGTAACGCCCGGCAT
CGTGGGACGAAAGATCGCCAGCGTGTGTGGTGCCATCGACGATGCCCTTCGCCGTCATTACGTGCTGCCTCTCGTCACAG
TGCCTGAAACCATCAAGCGCATGGCGGCTGTCATGGCGGCGTATGAAGCTATCGGCGGCATAACGGCGGTGAAGGACGAC
ACCAACGCAGGCAACAAGCTGCTGGTGCTGCAGGATCTCTATAAGCAGGCCCGCAAGGACTTGGCTCTGATCCGGGATGA
CAAGCTGGAGCTGGGGCTGGATGAGCTGGGGCTGGAACCTTCGACAGGGGCCAACGGCACCCTGGCCGTGGTGACGCGTC
CGGCAACACTGAACCTCAAGGGGTGGCGCTGA

Upstream 100 bases:

>100_bases
GAAGACCGCTCCAGAGGGCCTGAACAAGGCCCTCTGGATGTCGGGCCGAGTCGAACCTGTAACACTAGTTCAAAACTAGT
TCAAAACGCCCGGAACAAGC

Downstream 100 bases:

>100_bases
TGGCTGGTGCATCCTTCTCCATGCCCATGGACGGCCTGATGCGGGCCGTGGATGCGGGCATATCGCATGCCCAGCGCACC
CAGCAGCTGGCCGAGGCTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MYCERDDLHDYIPAAYLDAADKVTPGIVGRKIASVCGAIDDALRRHYVLPLVTVPETIKRMAAVMAAYEAIGGITAVKDD
TNAGNKLLVLQDLYKQARKDLALIRDDKLELGLDELGLEPSTGANGTLAVVTRPATLNLKGWR

Sequences:

>Translated_143_residues
MYCERDDLHDYIPAAYLDAADKVTPGIVGRKIASVCGAIDDALRRHYVLPLVTVPETIKRMAAVMAAYEAIGGITAVKDD
TNAGNKLLVLQDLYKQARKDLALIRDDKLELGLDELGLEPSTGANGTLAVVTRPATLNLKGWR
>Mature_143_residues
MYCERDDLHDYIPAAYLDAADKVTPGIVGRKIASVCGAIDDALRRHYVLPLVTVPETIKRMAAVMAAYEAIGGITAVKDD
TNAGNKLLVLQDLYKQARKDLALIRDDKLELGLDELGLEPSTGANGTLAVVTRPATLNLKGWR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15506; Mature: 15506

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYCERDDLHDYIPAAYLDAADKVTPGIVGRKIASVCGAIDDALRRHYVLPLVTVPETIKR
CCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHH
MAAVMAAYEAIGGITAVKDDTNAGNKLLVLQDLYKQARKDLALIRDDKLELGLDELGLEP
HHHHHHHHHHHCCEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHCCHHHHCCCC
STGANGTLAVVTRPATLNLKGWR
CCCCCCEEEEEECCCEEECCCCC
>Mature Secondary Structure
MYCERDDLHDYIPAAYLDAADKVTPGIVGRKIASVCGAIDDALRRHYVLPLVTVPETIKR
CCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHH
MAAVMAAYEAIGGITAVKDDTNAGNKLLVLQDLYKQARKDLALIRDDKLELGLDELGLEP
HHHHHHHHHHHCCEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHCCHHHHCCCC
STGANGTLAVVTRPATLNLKGWR
CCCCCCEEEEEECCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA