Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78358417

Identifier: 78358417

GI number: 78358417

Start: 3345622

End: 3346611

Strand: Direct

Name: 78358417

Synonym: Dde_3377

Alternate gene names: NA

Gene position: 3345622-3346611 (Clockwise)

Preceding gene: 78358416

Following gene: 78358418

Centisome position: 89.69

GC content: 59.9

Gene sequence:

>990_bases
ATGTTTGATCTGAAGCCGTATTTTACCGCAGCTCGTATCGCCAGGCGGTTCGAGGCCGCTCCGCCTCTGACCACTACGGT
CATGGACCTGCTGTTCCCGGCGGACGTGCGGGCGAACTATGAATCCCCCGTCATTCCTGTCTCCGACATCAAGCAGGTTG
TAGGTGCCGTGCCGGTTGTGCGCCGTGGCAGTGCGTCCATTCCCTTGCGTGGCGAAGATACTGAGACCTCCTACATCGAA
CCCCTGCCGGTGCGTATCCATGACGAGCTGAGCGCCGTGGATCTTAACAACCTCAAGATCGCCAGCCCCACCACGCTGGA
GCAGTGGTCCAATCGCAAGCAGCTGGCTCTGCGAAGGGCGGCCCGCCTCACGTCGGAAGTTCTCTGCGCTCAGGCCGCCT
TCGATGGCCGGATTGCTTATCCTCTGCTGCAGTCCAACGGCTCTTTCACCACGTATCAGGTGGATTACGGAGCTCCGCTC
GATCATGCCTTGGCAGCCGCTGAGAAATGGGACCATGCCGATGCGAGTCTCATGATTGTGTACGAATTGTTGGAAGACAT
GGCCACGGACCTCGACAAGGCCGGGTATGGCGGTTCCAAGATCACGTTTGCCGGGAGACTGGCTTTTTCCACGGTGCTCA
AGCTCATTGAGGCCACCGACAAGCCCAAAATTCCCGTTCTGGTGGAAAAGGACGGCTCCATCTCGCTTGGTGGTCACACC
ATCCGCAAGATGGCCGAAACCTACTATGACCCGTCCACCAAGACCACCAAGCCAAAGCTGGCCGACAAGGAAGTCCGCAT
GATTGCCACCGGCAATACGGCCTTCTTCTACGGCCCCGTGGACGATCTGGACGCCAACCTGCACGCCATGCCCATGTTCA
TCAAGCCCATCAAGCGGGACAACCCTTCCGGCATCCTGCTGGTCGGCGAATCCAAGCCGCTGCCGGCTGTCGCCCCCGAG
GCCACGGTCAAGGCCACCGTCCTCGCGTAA

Upstream 100 bases:

>100_bases
CGCCGACCTGCTCACCGTGTCCGGCGGCGCTGCACCGGATGCCGCAACCCTCGTCAAACTCGAAGAGCGCCACATCTACG
CTGAGGAGAGTGTGTAGCCC

Downstream 100 bases:

>100_bases
TCCCCCACTGTGCGAAGACCGCTCCAGAGGGCCTGAACAAGGCCCTCTGGATGTCGGGCCGAGTCGAACCTGTAACACTA
GTTCAAAACTAGTTCAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MFDLKPYFTAARIARRFEAAPPLTTTVMDLLFPADVRANYESPVIPVSDIKQVVGAVPVVRRGSASIPLRGEDTETSYIE
PLPVRIHDELSAVDLNNLKIASPTTLEQWSNRKQLALRRAARLTSEVLCAQAAFDGRIAYPLLQSNGSFTTYQVDYGAPL
DHALAAAEKWDHADASLMIVYELLEDMATDLDKAGYGGSKITFAGRLAFSTVLKLIEATDKPKIPVLVEKDGSISLGGHT
IRKMAETYYDPSTKTTKPKLADKEVRMIATGNTAFFYGPVDDLDANLHAMPMFIKPIKRDNPSGILLVGESKPLPAVAPE
ATVKATVLA

Sequences:

>Translated_329_residues
MFDLKPYFTAARIARRFEAAPPLTTTVMDLLFPADVRANYESPVIPVSDIKQVVGAVPVVRRGSASIPLRGEDTETSYIE
PLPVRIHDELSAVDLNNLKIASPTTLEQWSNRKQLALRRAARLTSEVLCAQAAFDGRIAYPLLQSNGSFTTYQVDYGAPL
DHALAAAEKWDHADASLMIVYELLEDMATDLDKAGYGGSKITFAGRLAFSTVLKLIEATDKPKIPVLVEKDGSISLGGHT
IRKMAETYYDPSTKTTKPKLADKEVRMIATGNTAFFYGPVDDLDANLHAMPMFIKPIKRDNPSGILLVGESKPLPAVAPE
ATVKATVLA
>Mature_329_residues
MFDLKPYFTAARIARRFEAAPPLTTTVMDLLFPADVRANYESPVIPVSDIKQVVGAVPVVRRGSASIPLRGEDTETSYIE
PLPVRIHDELSAVDLNNLKIASPTTLEQWSNRKQLALRRAARLTSEVLCAQAAFDGRIAYPLLQSNGSFTTYQVDYGAPL
DHALAAAEKWDHADASLMIVYELLEDMATDLDKAGYGGSKITFAGRLAFSTVLKLIEATDKPKIPVLVEKDGSISLGGHT
IRKMAETYYDPSTKTTKPKLADKEVRMIATGNTAFFYGPVDDLDANLHAMPMFIKPIKRDNPSGILLVGESKPLPAVAPE
ATVKATVLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35846; Mature: 35846

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDLKPYFTAARIARRFEAAPPLTTTVMDLLFPADVRANYESPVIPVSDIKQVVGAVPVV
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHCCCCCE
RRGSASIPLRGEDTETSYIEPLPVRIHDELSAVDLNNLKIASPTTLEQWSNRKQLALRRA
ECCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCEEECCCCHHHHHCCHHHHHHHHH
ARLTSEVLCAQAAFDGRIAYPLLQSNGSFTTYQVDYGAPLDHALAAAEKWDHADASLMIV
HHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHCCCCCCHHHHH
YELLEDMATDLDKAGYGGSKITFAGRLAFSTVLKLIEATDKPKIPVLVEKDGSISLGGHT
HHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEECHHH
IRKMAETYYDPSTKTTKPKLADKEVRMIATGNTAFFYGPVDDLDANLHAMPMFIKPIKRD
HHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCEEEEECCHHCCCCCCEECHHEEEHHCCC
NPSGILLVGESKPLPAVAPEATVKATVLA
CCCEEEEEECCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MFDLKPYFTAARIARRFEAAPPLTTTVMDLLFPADVRANYESPVIPVSDIKQVVGAVPVV
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHCCCCCE
RRGSASIPLRGEDTETSYIEPLPVRIHDELSAVDLNNLKIASPTTLEQWSNRKQLALRRA
ECCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEECCCEEECCCCHHHHHCCHHHHHHHHH
ARLTSEVLCAQAAFDGRIAYPLLQSNGSFTTYQVDYGAPLDHALAAAEKWDHADASLMIV
HHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHCCCCCCHHHHH
YELLEDMATDLDKAGYGGSKITFAGRLAFSTVLKLIEATDKPKIPVLVEKDGSISLGGHT
HHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEECHHH
IRKMAETYYDPSTKTTKPKLADKEVRMIATGNTAFFYGPVDDLDANLHAMPMFIKPIKRD
HHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCEEEEECCHHCCCCCCEECHHEEEHHCCC
NPSGILLVGESKPLPAVAPEATVKATVLA
CCCEEEEEECCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA