| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358413
Identifier: 78358413
GI number: 78358413
Start: 3341360
End: 3342931
Strand: Direct
Name: 78358413
Synonym: Dde_3373
Alternate gene names: NA
Gene position: 3341360-3342931 (Clockwise)
Preceding gene: 78358412
Following gene: 78358414
Centisome position: 89.58
GC content: 58.27
Gene sequence:
>1572_bases ATGAAGACACCCGTATTGTACGGACCTGATGGGTCCGTGATTGATTTTTCCAGCGCCGCCGATCGCGCTGCACTGGGAGA GCAACTCGCCACCCGCCGCAATGCCCTTGGCGGTTTTGATCTTGGTGCAGCATTGGGCTGGCTGCCGGACCCTGATCCGG TGCTCCGTAAACGTGGGGACAGCGTTCACGTATTGGAAGACCTTATGGCCGATGATGAGGTCACACAGGCTATTCAGTCC CGCAAGCTCAAGACCTTGAACCGCCGCGAGTATCGTTTTTCTCCGGGGGCCGCCAATGGGGAGGAGCCCACTGCACAGGC CGAACGGCTGTGCGACGATATTGTCCGGGACTTTGAGCAATTGGACATGGATGTGCTGATCAGTGGCATTCTCGATGCGC CGTACTTCGGCATGACGCCCATAGAACTTGTGTTTGTCCCGGATGGTGGACGGCTTCGCCTGGTCGCGGCTGACCCAAAA CCGGTGGAGTGGTTTGCCTTCGATGATGACAACCGGCTCATGTTCCGGGGTGAGTTCTTTACGCAGGCCCGGCCGGTGCA CCCGTATAAGTTTGTGCTGGCCCGCCATTTTCCCACCTACAAGAATCCGTATGGGCTGCGTCTCCTGTCCCGTTGCCTCT GGCCTGTGGCCTTCAAGCGTGGCGGCATCGAATTCTGGTGCCGGTTCACGGAGAAATACGGGCAGCCGTGGCTGCTCGGC ACCGCCCGCGCCGGTGCCACACAGCCTGAGATCAACCGCATGGCCGCCGACCTTGCCGCCATGGTGCAGGACGCTGTTGC CGTCGTGCCAAACGGGGCCAAGGTGGAAGCCGTGGAGTTTTCTGCCAAGGGTGGTTCCCAGCACCTTGAATTCATCACCC ACTGGGACAAATCCATCAACAAGGTGATCAAGGGGCAGACCCTGACCAGCGATGTGGGGAACGGGCACTCCAACGCGGCC ACGCAGACCCATTACCAACTACTTGGCGATTATTCTGATGCTGACGCTCTCATGGTGGAAACCGCCATGAACAATATCGC GTGGGCCTATATGCAGGTCAACGCGGCGGGCGAATTTGCGCCTCTCTTCGGTTACGTGGAACCTGATGACTACGCCGCGC AGGCTGAATTGGACACCAAGCTGAAGAATCTCGGTGTGCGGTTCAAGAAAACCTATTTCGTGAGGACCTATGATCTCACG GAAGATGAGTTCGAGCTGGATGGCGAACCAGAAGACGCGCCGAATCACAAAGAACCCAACGCCACTGCAGCCGGAGACAC GAACTTTGCCGAGCACGATACGGCAGGCAATCCGGACCCGTATCAACAAGCTTTAGATGCCTTCGTGAAAACGAGCCTGC CGGAAGCTGCCAAGCGAAATGAGAAATTCATGGCCGAGGTCAAGACTGTGCTGCAGGCCGCAGAATCGTGGGAGGACTTG CAGCTCATGCTGGCGGAGCTGCTCGGCAAGTCCATGGACGAGGATGAGCAAGCCGCTTTCATGGGCGACCTGTTGACCAA TGCGGACCTCTTCGGCCGTTACGCCATGCAGAGCAAGTCCGATGACCGTTGA
Upstream 100 bases:
>100_bases TATGCCTGCAACAGCATCGAAGCCGGTGAGGAGTGGGCCTGTGCAACCGCTGGTGGTGGAATGGCCCGCAGAATGACGCA CGGATACTAACGAGGATTAC
Downstream 100 bases:
>100_bases GCCTGTAGCGCTGCCCCCCAAAGAGGCCCTTGCCTATTGGCAGGACAAGGTGTCCGTCACCCCGGAGGTGTTCAAGAACC TTTCCGGGCAGGCCCGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MKTPVLYGPDGSVIDFSSAADRAALGEQLATRRNALGGFDLGAALGWLPDPDPVLRKRGDSVHVLEDLMADDEVTQAIQS RKLKTLNRREYRFSPGAANGEEPTAQAERLCDDIVRDFEQLDMDVLISGILDAPYFGMTPIELVFVPDGGRLRLVAADPK PVEWFAFDDDNRLMFRGEFFTQARPVHPYKFVLARHFPTYKNPYGLRLLSRCLWPVAFKRGGIEFWCRFTEKYGQPWLLG TARAGATQPEINRMAADLAAMVQDAVAVVPNGAKVEAVEFSAKGGSQHLEFITHWDKSINKVIKGQTLTSDVGNGHSNAA TQTHYQLLGDYSDADALMVETAMNNIAWAYMQVNAAGEFAPLFGYVEPDDYAAQAELDTKLKNLGVRFKKTYFVRTYDLT EDEFELDGEPEDAPNHKEPNATAAGDTNFAEHDTAGNPDPYQQALDAFVKTSLPEAAKRNEKFMAEVKTVLQAAESWEDL QLMLAELLGKSMDEDEQAAFMGDLLTNADLFGRYAMQSKSDDR
Sequences:
>Translated_523_residues MKTPVLYGPDGSVIDFSSAADRAALGEQLATRRNALGGFDLGAALGWLPDPDPVLRKRGDSVHVLEDLMADDEVTQAIQS RKLKTLNRREYRFSPGAANGEEPTAQAERLCDDIVRDFEQLDMDVLISGILDAPYFGMTPIELVFVPDGGRLRLVAADPK PVEWFAFDDDNRLMFRGEFFTQARPVHPYKFVLARHFPTYKNPYGLRLLSRCLWPVAFKRGGIEFWCRFTEKYGQPWLLG TARAGATQPEINRMAADLAAMVQDAVAVVPNGAKVEAVEFSAKGGSQHLEFITHWDKSINKVIKGQTLTSDVGNGHSNAA TQTHYQLLGDYSDADALMVETAMNNIAWAYMQVNAAGEFAPLFGYVEPDDYAAQAELDTKLKNLGVRFKKTYFVRTYDLT EDEFELDGEPEDAPNHKEPNATAAGDTNFAEHDTAGNPDPYQQALDAFVKTSLPEAAKRNEKFMAEVKTVLQAAESWEDL QLMLAELLGKSMDEDEQAAFMGDLLTNADLFGRYAMQSKSDDR >Mature_523_residues MKTPVLYGPDGSVIDFSSAADRAALGEQLATRRNALGGFDLGAALGWLPDPDPVLRKRGDSVHVLEDLMADDEVTQAIQS RKLKTLNRREYRFSPGAANGEEPTAQAERLCDDIVRDFEQLDMDVLISGILDAPYFGMTPIELVFVPDGGRLRLVAADPK PVEWFAFDDDNRLMFRGEFFTQARPVHPYKFVLARHFPTYKNPYGLRLLSRCLWPVAFKRGGIEFWCRFTEKYGQPWLLG TARAGATQPEINRMAADLAAMVQDAVAVVPNGAKVEAVEFSAKGGSQHLEFITHWDKSINKVIKGQTLTSDVGNGHSNAA TQTHYQLLGDYSDADALMVETAMNNIAWAYMQVNAAGEFAPLFGYVEPDDYAAQAELDTKLKNLGVRFKKTYFVRTYDLT EDEFELDGEPEDAPNHKEPNATAAGDTNFAEHDTAGNPDPYQQALDAFVKTSLPEAAKRNEKFMAEVKTVLQAAESWEDL QLMLAELLGKSMDEDEQAAFMGDLLTNADLFGRYAMQSKSDDR
Specific function: Unknown
COG id: COG4383
COG function: function code S; Mu-like prophage protein gp29
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To phage Mu protein gp29 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009279 [H]
Pfam domain/function: PF06074 DUF935 [H]
EC number: NA
Molecular weight: Translated: 58097; Mature: 58097
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS00664 VINCULIN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTPVLYGPDGSVIDFSSAADRAALGEQLATRRNALGGFDLGAALGWLPDPDPVLRKRGD CCCCEEECCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHCCC SVHVLEDLMADDEVTQAIQSRKLKTLNRREYRFSPGAANGEEPTAQAERLCDDIVRDFEQ CHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHH LDMDVLISGILDAPYFGMTPIELVFVPDGGRLRLVAADPKPVEWFAFDDDNRLMFRGEFF HCHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCEEEEEECHH TQARPVHPYKFVLARHFPTYKNPYGLRLLSRCLWPVAFKRGGIEFWCRFTEKYGQPWLLG CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHEEEEHHHHCCCEEEE TARAGATQPEINRMAADLAAMVQDAVAVVPNGAKVEAVEFSAKGGSQHLEFITHWDKSIN ECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH KVIKGQTLTSDVGNGHSNAATQTHYQLLGDYSDADALMVETAMNNIAWAYMQVNAAGEFA HHHCCCCEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEEEEEECCCCCH PLFGYVEPDDYAAQAELDTKLKNLGVRFKKTYFVRTYDLTEDEFELDGEPEDAPNHKEPN HHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCEECCCCCCCCCCCCCCC ATAAGDTNFAEHDTAGNPDPYQQALDAFVKTSLPEAAKRNEKFMAEVKTVLQAAESWEDL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHH QLMLAELLGKSMDEDEQAAFMGDLLTNADLFGRYAMQSKSDDR HHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCC >Mature Secondary Structure MKTPVLYGPDGSVIDFSSAADRAALGEQLATRRNALGGFDLGAALGWLPDPDPVLRKRGD CCCCEEECCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHCCC SVHVLEDLMADDEVTQAIQSRKLKTLNRREYRFSPGAANGEEPTAQAERLCDDIVRDFEQ CHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHH LDMDVLISGILDAPYFGMTPIELVFVPDGGRLRLVAADPKPVEWFAFDDDNRLMFRGEFF HCHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCEEEEEECHH TQARPVHPYKFVLARHFPTYKNPYGLRLLSRCLWPVAFKRGGIEFWCRFTEKYGQPWLLG CCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHEEEEHHHHCCCEEEE TARAGATQPEINRMAADLAAMVQDAVAVVPNGAKVEAVEFSAKGGSQHLEFITHWDKSIN ECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH KVIKGQTLTSDVGNGHSNAATQTHYQLLGDYSDADALMVETAMNNIAWAYMQVNAAGEFA HHHCCCCEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEEEEEECCCCCH PLFGYVEPDDYAAQAELDTKLKNLGVRFKKTYFVRTYDLTEDEFELDGEPEDAPNHKEPN HHCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCEECCCCCCCCCCCCCCC ATAAGDTNFAEHDTAGNPDPYQQALDAFVKTSLPEAAKRNEKFMAEVKTVLQAAESWEDL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHHH QLMLAELLGKSMDEDEQAAFMGDLLTNADLFGRYAMQSKSDDR HHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]