Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78358414

Identifier: 78358414

GI number: 78358414

Start: 3342921

End: 3344201

Strand: Direct

Name: 78358414

Synonym: Dde_3374

Alternate gene names: NA

Gene position: 3342921-3344201 (Clockwise)

Preceding gene: 78358413

Following gene: 78358415

Centisome position: 89.62

GC content: 60.81

Gene sequence:

>1281_bases
ATGACCGTTGAGCCTGTAGCGCTGCCCCCCAAAGAGGCCCTTGCCTATTGGCAGGACAAGGTGTCCGTCACCCCGGAGGT
GTTCAAGAACCTTTCCGGGCAGGCCCGCGCACGTGCCTTCGCCGTGTCGGGGCTGTCCCGGCAGGACCAGATAGCCGCCG
TGCAACAGGCTGTCCATGAAGCCATGGCCAACGGGGAAACTCTCAAAGACTTCAAGGGGCGTATGGACGCCGTACTGGAG
GGAGCCAGGCTGCCGCGCTGGCGGCTGGAGAACATCTACCGCACCAACGTACAGAGCGCCTACATGGCCGGGCGTTATGC
ACAGATGCAGCGTACCACGGCTTTGCGTCCCTACTGGCGCTATGTGGCCGTGGCCGACAAACGCACCCGCCCGGATCATT
TGGCGCTGCATGGGCTTGTCTATCCCCACGATCATAAATTCTGGAGCACCTATTATCCACCCAACGGCTTCGCCTGCCGC
TGCACAGTGCAAACGCTTTCTGAGCGGCAGGCCAAGCAAAGCGGTGTGGAAATCCAGAAGGATATGCCGGACCTCATTGA
GCCGGTGGACCCGCGCACAGGCAATCGTCTTCCGGCCCGTCGCCCGGTGCCCGATGCTGGCTTTGCGGGAAACGTGGGGC
AAGACTGGTTACATGGACTCGCACCTTCGGAACTGGACGCCAAGATCAAAGACCTGCCTCTTCCCACGCTTTGCCGCACC
GGCGGCACATCCTTTGCCGATCCACAAGCCGGTGCCCCGTGCAGGCCGCCACTGGCCTCATTGGCCAAGCGCCACATCCT
GCCGGTTACGGCAAAGGACATTCTGCCCGGGGGCCTGAAGGCGGAAGAGTATGTGGCTGCCTTCCTCAAAGAGTTCAACC
TTGCCGATATCAATGCCAGCGCTGTGCATACGATTCCGGGCGGTATCCCCGTCGTTATCGGCAAGGGATTGTTTATCGAC
AAGAAAACAGGCGGTTGGAAAGTGCTGAAGAGTGGCCGTGAGCAATATCTGAAGCTGTTGGCCAGAACTGTCAAAGAACC
GTGGGAGGTCTGGCAGGTGCCAGCGGAGGTGGCAGGAAAGCCTATGCCGGTGTTGCGGCTGATCAGGCTGTTCCGGGATG
AGGAGGAAGCCAGGATTGGGGGCTTTGCCGTGTTCAATCTGGTGCGGGGCCGTGAATGGCAGGGAGCCACCACCTTTACC
CCCAAGCTCGGCAACGAAGCTGCCATGCTCAAATACATGGAGCGCCAGCGGCAGGGAGCGCTGCTGTATCGCGAGCCCTA
A

Upstream 100 bases:

>100_bases
CTCGGCAAGTCCATGGACGAGGATGAGCAAGCCGCTTTCATGGGCGACCTGTTGACCAATGCGGACCTCTTCGGCCGTTA
CGCCATGCAGAGCAAGTCCG

Downstream 100 bases:

>100_bases
AAAAACAATGGCCCGGAAGAACCGGGCTTCCGAGCCTGCGACACCCTTGCTTCTACCCTCACCCGGACGAGGTTCAGGGT
ACGCCGCATGAACTATCTGC

Product: Phage putative head morphogenesis protein, SPP1 gp7

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MTVEPVALPPKEALAYWQDKVSVTPEVFKNLSGQARARAFAVSGLSRQDQIAAVQQAVHEAMANGETLKDFKGRMDAVLE
GARLPRWRLENIYRTNVQSAYMAGRYAQMQRTTALRPYWRYVAVADKRTRPDHLALHGLVYPHDHKFWSTYYPPNGFACR
CTVQTLSERQAKQSGVEIQKDMPDLIEPVDPRTGNRLPARRPVPDAGFAGNVGQDWLHGLAPSELDAKIKDLPLPTLCRT
GGTSFADPQAGAPCRPPLASLAKRHILPVTAKDILPGGLKAEEYVAAFLKEFNLADINASAVHTIPGGIPVVIGKGLFID
KKTGGWKVLKSGREQYLKLLARTVKEPWEVWQVPAEVAGKPMPVLRLIRLFRDEEEARIGGFAVFNLVRGREWQGATTFT
PKLGNEAAMLKYMERQRQGALLYREP

Sequences:

>Translated_426_residues
MTVEPVALPPKEALAYWQDKVSVTPEVFKNLSGQARARAFAVSGLSRQDQIAAVQQAVHEAMANGETLKDFKGRMDAVLE
GARLPRWRLENIYRTNVQSAYMAGRYAQMQRTTALRPYWRYVAVADKRTRPDHLALHGLVYPHDHKFWSTYYPPNGFACR
CTVQTLSERQAKQSGVEIQKDMPDLIEPVDPRTGNRLPARRPVPDAGFAGNVGQDWLHGLAPSELDAKIKDLPLPTLCRT
GGTSFADPQAGAPCRPPLASLAKRHILPVTAKDILPGGLKAEEYVAAFLKEFNLADINASAVHTIPGGIPVVIGKGLFID
KKTGGWKVLKSGREQYLKLLARTVKEPWEVWQVPAEVAGKPMPVLRLIRLFRDEEEARIGGFAVFNLVRGREWQGATTFT
PKLGNEAAMLKYMERQRQGALLYREP
>Mature_425_residues
TVEPVALPPKEALAYWQDKVSVTPEVFKNLSGQARARAFAVSGLSRQDQIAAVQQAVHEAMANGETLKDFKGRMDAVLEG
ARLPRWRLENIYRTNVQSAYMAGRYAQMQRTTALRPYWRYVAVADKRTRPDHLALHGLVYPHDHKFWSTYYPPNGFACRC
TVQTLSERQAKQSGVEIQKDMPDLIEPVDPRTGNRLPARRPVPDAGFAGNVGQDWLHGLAPSELDAKIKDLPLPTLCRTG
GTSFADPQAGAPCRPPLASLAKRHILPVTAKDILPGGLKAEEYVAAFLKEFNLADINASAVHTIPGGIPVVIGKGLFIDK
KTGGWKVLKSGREQYLKLLARTVKEPWEVWQVPAEVAGKPMPVLRLIRLFRDEEEARIGGFAVFNLVRGREWQGATTFTP
KLGNEAAMLKYMERQRQGALLYREP

Specific function: Involved in virion morphogenesis [H]

COG id: COG2369

COG function: function code S; Uncharacterized protein, homolog of phage Mu protein gp30

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To phage Mu protein F [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006528 [H]

Pfam domain/function: PF04233 Phage_Mu_F [H]

EC number: NA

Molecular weight: Translated: 47436; Mature: 47305

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVEPVALPPKEALAYWQDKVSVTPEVFKNLSGQARARAFAVSGLSRQDQIAAVQQAVHE
CCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
AMANGETLKDFKGRMDAVLEGARLPRWRLENIYRTNVQSAYMAGRYAQMQRTTALRPYWR
HHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
YVAVADKRTRPDHLALHGLVYPHDHKFWSTYYPPNGFACRCTVQTLSERQAKQSGVEIQK
HEEEECCCCCCCCEEEEEEECCCCCCCEEEECCCCCCEEEEEHHHHHHHHHHHCCCCHHH
DMPDLIEPVDPRTGNRLPARRPVPDAGFAGNVGQDWLHGLAPSELDAKIKDLPLPTLCRT
CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHCCHHHCCCCCHHHHC
GGTSFADPQAGAPCRPPLASLAKRHILPVTAKDILPGGLKAEEYVAAFLKEFNLADINAS
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC
AVHTIPGGIPVVIGKGLFIDKKTGGWKVLKSGREQYLKLLARTVKEPWEVWQVPAEVAGK
EEEECCCCEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHCCC
PMPVLRLIRLFRDEEEARIGGFAVFNLVRGREWQGATTFTPKLGNEAAMLKYMERQRQGA
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHCCC
LLYREP
CEEECC
>Mature Secondary Structure 
TVEPVALPPKEALAYWQDKVSVTPEVFKNLSGQARARAFAVSGLSRQDQIAAVQQAVHE
CCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
AMANGETLKDFKGRMDAVLEGARLPRWRLENIYRTNVQSAYMAGRYAQMQRTTALRPYWR
HHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
YVAVADKRTRPDHLALHGLVYPHDHKFWSTYYPPNGFACRCTVQTLSERQAKQSGVEIQK
HEEEECCCCCCCCEEEEEEECCCCCCCEEEECCCCCCEEEEEHHHHHHHHHHHCCCCHHH
DMPDLIEPVDPRTGNRLPARRPVPDAGFAGNVGQDWLHGLAPSELDAKIKDLPLPTLCRT
CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHCCHHHCCCCCHHHHC
GGTSFADPQAGAPCRPPLASLAKRHILPVTAKDILPGGLKAEEYVAAFLKEFNLADINAS
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC
AVHTIPGGIPVVIGKGLFIDKKTGGWKVLKSGREQYLKLLARTVKEPWEVWQVPAEVAGK
EEEECCCCEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHCCC
PMPVLRLIRLFRDEEEARIGGFAVFNLVRGREWQGATTFTPKLGNEAAMLKYMERQRQGA
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHCCC
LLYREP
CEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]