Click here to switch to the map view.

The map label for this gene is luxP [H]

Identifier: 78358351

GI number: 78358351

Start: 3297210

End: 3298394

Strand: Direct

Name: luxP [H]

Synonym: Dde_3311

Alternate gene names: 78358351

Gene position: 3297210-3298394 (Clockwise)

Preceding gene: 78358348

Following gene: 78358360

Centisome position: 88.39

GC content: 56.12

Gene sequence:

>1185_bases
ATGCGTTTCACCAGCACTTTTTTTCTACACGCAACGGCGTTTTTTCCGATGCTTTTTTGGGCTGTACTGTCCGTTGCCCC
CGCGGTTCAGGCGACGCAGCTTTCTGCAGAAGAATATTATACCGTCGAAGAATATCAGAAAAAACACCCCGCTCAACTGC
GCACCATGATGCGCTTTCAGACACTGGTGCGCGGTGGTGCCACCCCTGTTACGCGCAATCTGCCACACATACGCATTGCC
TTCATTCATCCGGGAGTTCAGGCTTCCGACTACTGGCAACGCAGCGCCGCTTCTTTCAAAGCACGCATGGACGAGCTGGG
GCTGCGCTATGAACTGCTTGAATTCCGTTCTCGCCCCACACTGGATGTACGCCTGCAGGAACAGCAACTGCGCGAAGCAC
TGCAGGCCGACCCGGACTATCTTGTCTTCACCCTTGATGTGGGGCGGCACAAAAAAATGATAGAGCAGGTACTTGAACGC
GGCAGACCCAAGATAATACTGCAGAACATCACGACTCCGCTACGCAGCTGGGAAGACAGGCAGCCACTGCTGTACGCAGG
TTTCGACCACATCAGCGGCACACGGCTGCTGGCAGACCACTTCATGCTGAACCGCCCGCAGGGCGGCACCTATGCCATGC
TGTACTTTTCGCAGGGCTATGTCAGCACCATGCGCGGTGACACCTTTAAAGCATTCGTTCACCCCCACTGGAAGCTTGCC
GGTACCTATTACACCGACGGCATACGCGCAAAGGCAAGGCAGGCGACACTGGACATACTTTCTTCGCAGGATGTCGACCT
GATATATGCCTGCGCCACAGACACGGCGCTGGGAGCGGCAGAAGCCATGGAGCAGACGGGCATGCAGGGTAAGGTACTGC
TTAACGGCTGGGGAGGAGGCAGTGCGGAGCTGCAAGCCCTGCTGGCGGGGAAACTGGATGTGACCGTGATGCGGATGAAC
GACGATAACGGTGTGGCCATGGCGGAAGCCATACGACTGGACCTTGAAGGCCGTCCGCATGAAATACCTGTCATTTTTTC
CGGCGAATTTGTCCTTGTCCGCAAAGACATCGGACACGACACCCTTGAGTACCTGAAAAAAAGAGCCTTCCGCTACTCTG
GGTGGGATGATTCCGGCACCGGTCACCTTACTGAAAGCAATACGGCCGCCGTGCCTTCACAGTAG

Upstream 100 bases:

>100_bases
AAGATATAATATCCTGTAACTAAACATATTTTACAAACAATTCCGGTCAGACTTCACGGCGGCCGGCCCACTGCAGACAA
CGCAGCACCGGAGATGGCTC

Downstream 100 bases:

>100_bases
GCCTGCGCGGTCCGCCTGCAGACAGCGTTGCAGGCGTGACAGCCGAAGGCTGCCGCCGGTGAATCTGGTGCGCTTTTACC
GGCACGTACCCATGCGCGCA

Product: ABC-type sugar transport system, periplasmic component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MRFTSTFFLHATAFFPMLFWAVLSVAPAVQATQLSAEEYYTVEEYQKKHPAQLRTMMRFQTLVRGGATPVTRNLPHIRIA
FIHPGVQASDYWQRSAASFKARMDELGLRYELLEFRSRPTLDVRLQEQQLREALQADPDYLVFTLDVGRHKKMIEQVLER
GRPKIILQNITTPLRSWEDRQPLLYAGFDHISGTRLLADHFMLNRPQGGTYAMLYFSQGYVSTMRGDTFKAFVHPHWKLA
GTYYTDGIRAKARQATLDILSSQDVDLIYACATDTALGAAEAMEQTGMQGKVLLNGWGGGSAELQALLAGKLDVTVMRMN
DDNGVAMAEAIRLDLEGRPHEIPVIFSGEFVLVRKDIGHDTLEYLKKRAFRYSGWDDSGTGHLTESNTAAVPSQ

Sequences:

>Translated_394_residues
MRFTSTFFLHATAFFPMLFWAVLSVAPAVQATQLSAEEYYTVEEYQKKHPAQLRTMMRFQTLVRGGATPVTRNLPHIRIA
FIHPGVQASDYWQRSAASFKARMDELGLRYELLEFRSRPTLDVRLQEQQLREALQADPDYLVFTLDVGRHKKMIEQVLER
GRPKIILQNITTPLRSWEDRQPLLYAGFDHISGTRLLADHFMLNRPQGGTYAMLYFSQGYVSTMRGDTFKAFVHPHWKLA
GTYYTDGIRAKARQATLDILSSQDVDLIYACATDTALGAAEAMEQTGMQGKVLLNGWGGGSAELQALLAGKLDVTVMRMN
DDNGVAMAEAIRLDLEGRPHEIPVIFSGEFVLVRKDIGHDTLEYLKKRAFRYSGWDDSGTGHLTESNTAAVPSQ
>Mature_394_residues
MRFTSTFFLHATAFFPMLFWAVLSVAPAVQATQLSAEEYYTVEEYQKKHPAQLRTMMRFQTLVRGGATPVTRNLPHIRIA
FIHPGVQASDYWQRSAASFKARMDELGLRYELLEFRSRPTLDVRLQEQQLREALQADPDYLVFTLDVGRHKKMIEQVLER
GRPKIILQNITTPLRSWEDRQPLLYAGFDHISGTRLLADHFMLNRPQGGTYAMLYFSQGYVSTMRGDTFKAFVHPHWKLA
GTYYTDGIRAKARQATLDILSSQDVDLIYACATDTALGAAEAMEQTGMQGKVLLNGWGGGSAELQALLAGKLDVTVMRMN
DDNGVAMAEAIRLDLEGRPHEIPVIFSGEFVLVRKDIGHDTLEYLKKRAFRYSGWDDSGTGHLTESNTAAVPSQ

Specific function: Binds to an autoinducer molecule. This complex then interacts with the luxQ sensor protein [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44475; Mature: 44475

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFTSTFFLHATAFFPMLFWAVLSVAPAVQATQLSAEEYYTVEEYQKKHPAQLRTMMRFQ
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHCEEHHHHHHCCHHHHHHHHHHH
TLVRGGATPVTRNLPHIRIAFIHPGVQASDYWQRSAASFKARMDELGLRYELLEFRSRPT
HHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
LDVRLQEQQLREALQADPDYLVFTLDVGRHKKMIEQVLERGRPKIILQNITTPLRSWEDR
EEEEECHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCC
QPLLYAGFDHISGTRLLADHFMLNRPQGGTYAMLYFSQGYVSTMRGDTFKAFVHPHWKLA
CCEEEECCCCCCCCHHHHHHHHEECCCCCEEEEEEEECCCHHHHCCCEEEEEECCCEEEE
GTYYTDGIRAKARQATLDILSSQDVDLIYACATDTALGAAEAMEQTGMQGKVLLNGWGGG
EEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCC
SAELQALLAGKLDVTVMRMNDDNGVAMAEAIRLDLEGRPHEIPVIFSGEFVLVRKDIGHD
HHHHHHHHCCCEEEEEEEEECCCCEEEEEEEEEECCCCCCEEEEEECCCEEEEEECCCHH
TLEYLKKRAFRYSGWDDSGTGHLTESNTAAVPSQ
HHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCC
>Mature Secondary Structure
MRFTSTFFLHATAFFPMLFWAVLSVAPAVQATQLSAEEYYTVEEYQKKHPAQLRTMMRFQ
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHCEEHHHHHHCCHHHHHHHHHHH
TLVRGGATPVTRNLPHIRIAFIHPGVQASDYWQRSAASFKARMDELGLRYELLEFRSRPT
HHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
LDVRLQEQQLREALQADPDYLVFTLDVGRHKKMIEQVLERGRPKIILQNITTPLRSWEDR
EEEEECHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCC
QPLLYAGFDHISGTRLLADHFMLNRPQGGTYAMLYFSQGYVSTMRGDTFKAFVHPHWKLA
CCEEEECCCCCCCCHHHHHHHHEECCCCCEEEEEEEECCCHHHHCCCEEEEEECCCEEEE
GTYYTDGIRAKARQATLDILSSQDVDLIYACATDTALGAAEAMEQTGMQGKVLLNGWGGG
EEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCC
SAELQALLAGKLDVTVMRMNDDNGVAMAEAIRLDLEGRPHEIPVIFSGEFVLVRKDIGHD
HHHHHHHHCCCEEEEEEEEECCCCEEEEEEEEEECCCCCCEEEEEECCCEEEEEECCCHH
TLEYLKKRAFRYSGWDDSGTGHLTESNTAAVPSQ
HHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA