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The map label for this gene is glcF [H]

Identifier: 78358280

GI number: 78358280

Start: 3234259

End: 3235551

Strand: Direct

Name: glcF [H]

Synonym: Dde_3240

Alternate gene names: 78358280

Gene position: 3234259-3235551 (Clockwise)

Preceding gene: 78358279

Following gene: 78358281

Centisome position: 86.7

GC content: 57.0

Gene sequence:

>1293_bases
ATGGCCGATCTGAATAAACTTGCCAAAATGCTGCAGGAACTGGACGACCAGATGGTCGCCTGCATGAAATGCGGCATGTG
TCAGGCTGTGTGTCCCGTCTTTGCCGAAACCATGCGCGAAGCAGACGTGACCCGCGGCAAGATTGCGCTGCTGGAAAACC
TTGCTCATGAAATGATCAAGGATCCCGAGAGCGTGCAGGAACGCGTGAACAAGTGTCTGCTGTGCGGCTCGTGTGCCGCC
AACTGCCCTTCCGGCGTGCAGATCATGGACATATTCCTGCGTGCGCGCGTCATCGTGAACACGTATGTGGGCCTTTCGCC
TGCCAAAAAGGCAATCCTGCGCGGCATGGTGGCAAACCCCAGACTGTTCAACATGCTTCTGGACATCGGTTCCAAGTTTC
AGGGTCTGTTCACTTCTCAGGCCAACGAACTGCTTGGTTCCTCGTGTTCCAAAATCATGTCGCCCATCATCGGTGACCGG
CACTTCTCGCCGCTGGCCAAAAAGTCGCTGCACAGCAAGTACGGCAGTCTGGATATCCCCACCGGCAAGAGCGGCATCCG
CGTGCTGTTCTACCCCGGCTGCGTGGGTGACAAGATGTACACATCCATGGCGGAAGCCTGCCTCAAGGTGTTCAGACACC
ACGGCGTGGGCGTGTACATGCCCGACGCTCAGGCATGTTGCGGCATACCCGCACTTTCTGCCGGCGACAGGGTAGCCTAC
GACAGACTTGTGAAGTACAATGTGGAGCTGTTCAGCAAGGGCGAGTTCGACTACATCATCTCGCCCTGCGGTTCCTGCAC
CTCCACCATCAAGGAGCTGTGGGGCCACATGGGAGACGACTACCCCGAGGAACTGAAGCGCAAAATCGCCTCTTTTGCTG
AAAAGGCAATGGACATCAGCGAATTTGTGGTGGACGTTCTGGGCGTGAATCCCGAGTCTGTCTCCACCGGCGGTAAAAAG
GTGACGTTCCATGATTCATGTCACCTGAAGAAGTCACTGGGCGTGTTCAAGCAGCCCCGCGACCTCATCCGCATGAACAA
AAACTATGAACTGGTGGAAATGAGCGAAGCCGACCGCTGCTGCGGCTGCGGCGGTACGTTCAACCTCTACCACTACGATC
TTTCCAAAAAGATCGGCCAGCGCAAGCGCGACAATATCGTCGCGTCCGGCGCACAGGTTGTAGCCACCGGCTGCCCCGCC
TGCATGATGCAGATGACCGACCTGCTGTCGCAGAACAACGACAGCGTACAGGTGCGTCACTGCATCGAACTCTACGCTGA
AACCCTCGGCTAG

Upstream 100 bases:

>100_bases
GAAACTTCCAGAGCCACCATTGACTTCTCGCTGAACATGAAGCGGGCCATCGACCCCAACAACATTCTCAATCCCGGCAA
GATCATCGGAGGCTAATGCA

Downstream 100 bases:

>100_bases
AGATATACTGCAGGCGTCTCGGCGCCGTGCACAGCGTATCTTAAGGCCCGCCCGTTGGGCGGGCCTTTCGGGCTGTGGCG
GAGCGGTTCCGTCAGGCCGT

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MADLNKLAKMLQELDDQMVACMKCGMCQAVCPVFAETMREADVTRGKIALLENLAHEMIKDPESVQERVNKCLLCGSCAA
NCPSGVQIMDIFLRARVIVNTYVGLSPAKKAILRGMVANPRLFNMLLDIGSKFQGLFTSQANELLGSSCSKIMSPIIGDR
HFSPLAKKSLHSKYGSLDIPTGKSGIRVLFYPGCVGDKMYTSMAEACLKVFRHHGVGVYMPDAQACCGIPALSAGDRVAY
DRLVKYNVELFSKGEFDYIISPCGSCTSTIKELWGHMGDDYPEELKRKIASFAEKAMDISEFVVDVLGVNPESVSTGGKK
VTFHDSCHLKKSLGVFKQPRDLIRMNKNYELVEMSEADRCCGCGGTFNLYHYDLSKKIGQRKRDNIVASGAQVVATGCPA
CMMQMTDLLSQNNDSVQVRHCIELYAETLG

Sequences:

>Translated_430_residues
MADLNKLAKMLQELDDQMVACMKCGMCQAVCPVFAETMREADVTRGKIALLENLAHEMIKDPESVQERVNKCLLCGSCAA
NCPSGVQIMDIFLRARVIVNTYVGLSPAKKAILRGMVANPRLFNMLLDIGSKFQGLFTSQANELLGSSCSKIMSPIIGDR
HFSPLAKKSLHSKYGSLDIPTGKSGIRVLFYPGCVGDKMYTSMAEACLKVFRHHGVGVYMPDAQACCGIPALSAGDRVAY
DRLVKYNVELFSKGEFDYIISPCGSCTSTIKELWGHMGDDYPEELKRKIASFAEKAMDISEFVVDVLGVNPESVSTGGKK
VTFHDSCHLKKSLGVFKQPRDLIRMNKNYELVEMSEADRCCGCGGTFNLYHYDLSKKIGQRKRDNIVASGAQVVATGCPA
CMMQMTDLLSQNNDSVQVRHCIELYAETLG
>Mature_429_residues
ADLNKLAKMLQELDDQMVACMKCGMCQAVCPVFAETMREADVTRGKIALLENLAHEMIKDPESVQERVNKCLLCGSCAAN
CPSGVQIMDIFLRARVIVNTYVGLSPAKKAILRGMVANPRLFNMLLDIGSKFQGLFTSQANELLGSSCSKIMSPIIGDRH
FSPLAKKSLHSKYGSLDIPTGKSGIRVLFYPGCVGDKMYTSMAEACLKVFRHHGVGVYMPDAQACCGIPALSAGDRVAYD
RLVKYNVELFSKGEFDYIISPCGSCTSTIKELWGHMGDDYPEELKRKIASFAEKAMDISEFVVDVLGVNPESVSTGGKKV
TFHDSCHLKKSLGVFKQPRDLIRMNKNYELVEMSEADRCCGCGGTFNLYHYDLSKKIGQRKRDNIVASGAQVVATGCPAC
MMQMTDLLSQNNDSVQVRHCIELYAETLG

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI48994913, Length=430, Percent_Identity=24.1860465116279, Blast_Score=116, Evalue=3e-27,
Organism=Escherichia coli, GI1786497, Length=239, Percent_Identity=29.7071129707113, Blast_Score=115, Evalue=8e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR012257 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 47253; Mature: 47121

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADLNKLAKMLQELDDQMVACMKCGMCQAVCPVFAETMREADVTRGKIALLENLAHEMIK
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
DPESVQERVNKCLLCGSCAANCPSGVQIMDIFLRARVIVNTYVGLSPAKKAILRGMVANP
CHHHHHHHHHHHEECCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCH
RLFNMLLDIGSKFQGLFTSQANELLGSSCSKIMSPIIGDRHFSPLAKKSLHSKYGSLDIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC
TGKSGIRVLFYPGCVGDKMYTSMAEACLKVFRHHGVGVYMPDAQACCGIPALSAGDRVAY
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHCCCCCCCCCCHHHH
DRLVKYNVELFSKGEFDYIISPCGSCTSTIKELWGHMGDDYPEELKRKIASFAEKAMDIS
HHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
EFVVDVLGVNPESVSTGGKKVTFHDSCHLKKSLGVFKQPRDLIRMNKNYELVEMSEADRC
HHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHCHHHCCHHHHHCCCCCCEEECCCCCCC
CGCGGTFNLYHYDLSKKIGQRKRDNIVASGAQVVATGCPACMMQMTDLLSQNNDSVQVRH
CCCCCCCEEEEEHHHHHHCCHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCCHHHHH
CIELYAETLG
HHHHHHHHCC
>Mature Secondary Structure 
ADLNKLAKMLQELDDQMVACMKCGMCQAVCPVFAETMREADVTRGKIALLENLAHEMIK
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
DPESVQERVNKCLLCGSCAANCPSGVQIMDIFLRARVIVNTYVGLSPAKKAILRGMVANP
CHHHHHHHHHHHEECCCHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCH
RLFNMLLDIGSKFQGLFTSQANELLGSSCSKIMSPIIGDRHFSPLAKKSLHSKYGSLDIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC
TGKSGIRVLFYPGCVGDKMYTSMAEACLKVFRHHGVGVYMPDAQACCGIPALSAGDRVAY
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEECCCHHHHCCCCCCCCCCHHHH
DRLVKYNVELFSKGEFDYIISPCGSCTSTIKELWGHMGDDYPEELKRKIASFAEKAMDIS
HHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
EFVVDVLGVNPESVSTGGKKVTFHDSCHLKKSLGVFKQPRDLIRMNKNYELVEMSEADRC
HHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHCHHHCCHHHHHCCCCCCEEECCCCCCC
CGCGGTFNLYHYDLSKKIGQRKRDNIVASGAQVVATGCPACMMQMTDLLSQNNDSVQVRH
CCCCCCCEEEEEHHHHHHCCHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCCCHHHHH
CIELYAETLG
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]