| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358228
Identifier: 78358228
GI number: 78358228
Start: 3175883
End: 3176644
Strand: Direct
Name: 78358228
Synonym: Dde_3188
Alternate gene names: NA
Gene position: 3175883-3176644 (Clockwise)
Preceding gene: 78358227
Following gene: 78358229
Centisome position: 85.14
GC content: 63.65
Gene sequence:
>762_bases GTGCACTATAAAAGCACCGGAACTGCAACCCGTTATACCTACCACCAGATGACGCTGATTATTACCACCGCCACCACCAG AGAAATGGAAGCCGTCCTTAAAGGGTTCAACGGCAGGGGCCGCGTAGGCTGCGTGCTACCCCGTCAGGGTGAAGTATGCG CATCGCCCGTCAACGAACGTCAGTGTCTGCTGGCCGTGACCGGTGTGGGACCGGTGAATGCGGCCTTTACACTGGGCCGG CTGCTGGGCGAACACCGCAACATCGACGGGGTTATCTCGCTGGGTATAGCAGGCACATTTGACCCGGATGCCGCCCCGCT GGGCAGCACTGTGCTGGCCACGCGTGAAACATGGGCCGATTACGGCCTGTATACGGCACAGGGGGTCGACCCCATGGGAA TCGGGTTCGGCCAGACGGACGATGCCGTCAATCCGGTCTGGAACAGTATAGAGCTGAACCCCGCGCCGGCACTGGCCGTG CTGCAGTTGACCCCGCCGCCCCTTTGCCGCACGGGCGGCAGCCTGACGGTGGCCGCCGCCAGCGGTACGGCGGAACGCGC CTGCGCCATGCGGCAGACGCATCATGCCCTGACAGAAAATATGGAAGGCTTTGCGCTGGCGCTCGGCTGTCTGCGGCAGG GTGTGCCTTTTCTGGAACTGCGCACGGTTTCCAATGTGGTCGGTTCGCGCGCAGCGCATGACTGGGCCGTGGACGATGCA TTCGCCTCGCTGGGGCAGGCCGCCCGCGCCCTGTTTGTCTGA
Upstream 100 bases:
>100_bases TCACTGACGCCGGTTTTGACTACTGGCGCCTGTAACGGCACCGTTTTGTTTGCGGCGCCTATGCCCCCGCACACCGCCCC TTCGCTTTACAGGAGGGGCG
Downstream 100 bases:
>100_bases CAAAGATACACTTGCCTAGCGGCTTGAAAAACGGAACAATACGGCTCATGCAAGAACTTCTGGAATATCTGGGCGCCATC CAGCCCAAAGTGAATGAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: MTA/SAH Nucleosidase; Phosphorylase
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MHYKSTGTATRYTYHQMTLIITTATTREMEAVLKGFNGRGRVGCVLPRQGEVCASPVNERQCLLAVTGVGPVNAAFTLGR LLGEHRNIDGVISLGIAGTFDPDAAPLGSTVLATRETWADYGLYTAQGVDPMGIGFGQTDDAVNPVWNSIELNPAPALAV LQLTPPPLCRTGGSLTVAAASGTAERACAMRQTHHALTENMEGFALALGCLRQGVPFLELRTVSNVVGSRAAHDWAVDDA FASLGQAARALFV
Sequences:
>Translated_253_residues MHYKSTGTATRYTYHQMTLIITTATTREMEAVLKGFNGRGRVGCVLPRQGEVCASPVNERQCLLAVTGVGPVNAAFTLGR LLGEHRNIDGVISLGIAGTFDPDAAPLGSTVLATRETWADYGLYTAQGVDPMGIGFGQTDDAVNPVWNSIELNPAPALAV LQLTPPPLCRTGGSLTVAAASGTAERACAMRQTHHALTENMEGFALALGCLRQGVPFLELRTVSNVVGSRAAHDWAVDDA FASLGQAARALFV >Mature_253_residues MHYKSTGTATRYTYHQMTLIITTATTREMEAVLKGFNGRGRVGCVLPRQGEVCASPVNERQCLLAVTGVGPVNAAFTLGR LLGEHRNIDGVISLGIAGTFDPDAAPLGSTVLATRETWADYGLYTAQGVDPMGIGFGQTDDAVNPVWNSIELNPAPALAV LQLTPPPLCRTGGSLTVAAASGTAERACAMRQTHHALTENMEGFALALGCLRQGVPFLELRTVSNVVGSRAAHDWAVDDA FASLGQAARALFV
Specific function: Unknown
COG id: COG0775
COG function: function code F; Nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26639; Mature: 26639
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYKSTGTATRYTYHQMTLIITTATTREMEAVLKGFNGRGRVGCVLPRQGEVCASPVNER CCCCCCCCEEEEEEEEEEEEEEECCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCC QCLLAVTGVGPVNAAFTLGRLLGEHRNIDGVISLGIAGTFDPDAAPLGSTVLATRETWAD EEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEHHHHHHH YGLYTAQGVDPMGIGFGQTDDAVNPVWNSIELNPAPALAVLQLTPPPLCRTGGSLTVAAA CCCEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEECCCCHHHCCCCEEEEEC SGTAERACAMRQTHHALTENMEGFALALGCLRQGVPFLELRTVSNVVGSRAAHDWAVDDA CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCHHHHHH FASLGQAARALFV HHHHHHHHHHHCC >Mature Secondary Structure MHYKSTGTATRYTYHQMTLIITTATTREMEAVLKGFNGRGRVGCVLPRQGEVCASPVNER CCCCCCCCEEEEEEEEEEEEEEECCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCC QCLLAVTGVGPVNAAFTLGRLLGEHRNIDGVISLGIAGTFDPDAAPLGSTVLATRETWAD EEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEHHHHHHH YGLYTAQGVDPMGIGFGQTDDAVNPVWNSIELNPAPALAVLQLTPPPLCRTGGSLTVAAA CCCEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEECCCCHHHCCCCEEEEEC SGTAERACAMRQTHHALTENMEGFALALGCLRQGVPFLELRTVSNVVGSRAAHDWAVDDA CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCHHHHHH FASLGQAARALFV HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA