| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is hepT [H]
Identifier: 78358229
GI number: 78358229
Start: 3176692
End: 3177660
Strand: Direct
Name: hepT [H]
Synonym: Dde_3189
Alternate gene names: 78358229
Gene position: 3176692-3177660 (Clockwise)
Preceding gene: 78358228
Following gene: 78358230
Centisome position: 85.16
GC content: 59.34
Gene sequence:
>969_bases ATGCAAGAACTTCTGGAATATCTGGGCGCCATCCAGCCCAAAGTGAATGAGACTCTGGCCGCGGAAACCGGCACTCTGAA CACCATGGTGCAACCTGTGGCCACTCATGTGCTGAGCGCCGGCGGCAAACGCCTGCGGCCGCTGCTGGCCATACTTTTTG CCCGTGCCCTGGGCCGCGGCGGCGACGATATATACCCGCTGGCCTGTTCCGTCGAGCTGCTGCACTCGGCCACACTGCTG CACGACGACATCATAGACGACGCCGCGCTGCGCCGTGGTCTGCCCGCCGCGCACACACTTTTCGGCAGCACCAGAACCAT CCTTGCAGGCGATGCGCTGCTGGCCCTCGCCAACCTCATTGTTTCGCGTTATGGTGATACGAGGCTTACCGAATGCATCG CACGGGCCATCATTGAAACAGCCACCGGTGAAATTGCCGAAATCGAATACCTGCGCAGCACAGGCCACCCGCAGGAAACA TATATAGAAATTATCAAAGGCAAAACCGCGTGGATGATTCAGGCTTCCTGTCAGCTGGGTGCCATTGCGGCCGGTGCCAC GGCGCAGCAGGAGCAGGCAGCCTGCGACTTCGGCATGAATCTGGGCATAGCCTTCCAGATAGTGGATGATGCGCTGGACT TTTCACCTTCTGCCGGAGAAACCGGCAAGCCGGTGGCCGGCGACCTGCGCGAAGGCAAGCTTACCCCGCCGCTGCACATG TATCTGGAAAGGCTGGAAGGCGCCGACCGGCAGGAGTTTCTGCACAAATTCACCACCGGCACCTTTTCCGATGCCGATGT GGACAACGTGGCAAGAGCGGTGCGCGGACAGGGGCTGGACAAAGCCACCAGAGACCTTGCCGACACCTATCTGAAAAAAG CCGCAGACGCACTGCACATGCTGGACGAAAGCAGGGAAAAAACCGTGCTCAGGCAAACGGTGGATTATGTGAAAAACCGC AGCAGGTAG
Upstream 100 bases:
>100_bases TGGACGATGCATTCGCCTCGCTGGGGCAGGCCGCCCGCGCCCTGTTTGTCTGACAAAGATACACTTGCCTAGCGGCTTGA AAAACGGAACAATACGGCTC
Downstream 100 bases:
>100_bases GAAGGCCCATGACCACGCAAGAAGCAGCTGACCGCAGTAAGACCATGGAGTGGTACTCCGAGTGTCTTCAGCTCACGTTT CCCCCTGTGATGGTCAAACT
Product: trans-hexaprenyltranstransferase
Products: NA
Alternate protein names: HEPPP synthase subunit 2; Spore germination protein C3 [H]
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MQELLEYLGAIQPKVNETLAAETGTLNTMVQPVATHVLSAGGKRLRPLLAILFARALGRGGDDIYPLACSVELLHSATLL HDDIIDDAALRRGLPAAHTLFGSTRTILAGDALLALANLIVSRYGDTRLTECIARAIIETATGEIAEIEYLRSTGHPQET YIEIIKGKTAWMIQASCQLGAIAAGATAQQEQAACDFGMNLGIAFQIVDDALDFSPSAGETGKPVAGDLREGKLTPPLHM YLERLEGADRQEFLHKFTTGTFSDADVDNVARAVRGQGLDKATRDLADTYLKKAADALHMLDESREKTVLRQTVDYVKNR SR
Sequences:
>Translated_322_residues MQELLEYLGAIQPKVNETLAAETGTLNTMVQPVATHVLSAGGKRLRPLLAILFARALGRGGDDIYPLACSVELLHSATLL HDDIIDDAALRRGLPAAHTLFGSTRTILAGDALLALANLIVSRYGDTRLTECIARAIIETATGEIAEIEYLRSTGHPQET YIEIIKGKTAWMIQASCQLGAIAAGATAQQEQAACDFGMNLGIAFQIVDDALDFSPSAGETGKPVAGDLREGKLTPPLHM YLERLEGADRQEFLHKFTTGTFSDADVDNVARAVRGQGLDKATRDLADTYLKKAADALHMLDESREKTVLRQTVDYVKNR SR >Mature_322_residues MQELLEYLGAIQPKVNETLAAETGTLNTMVQPVATHVLSAGGKRLRPLLAILFARALGRGGDDIYPLACSVELLHSATLL HDDIIDDAALRRGLPAAHTLFGSTRTILAGDALLALANLIVSRYGDTRLTECIARAIIETATGEIAEIEYLRSTGHPQET YIEIIKGKTAWMIQASCQLGAIAAGATAQQEQAACDFGMNLGIAFQIVDDALDFSPSAGETGKPVAGDLREGKLTPPLHM YLERLEGADRQEFLHKFTTGTFSDADVDNVARAVRGQGLDKATRDLADTYLKKAADALHMLDESREKTVLRQTVDYVKNR SR
Specific function: Supplies heptaprenyl diphosphate, the precursor for the side chain of the isoprenoid quinone menaquinone-7 (MQ-7) [H]
COG id: COG0142
COG function: function code H; Geranylgeranyl pyrophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FPP/GGPP synthase family [H]
Homologues:
Organism=Homo sapiens, GI50659086, Length=315, Percent_Identity=27.3015873015873, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI4758430, Length=240, Percent_Identity=26.6666666666667, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI83700220, Length=240, Percent_Identity=26.6666666666667, Blast_Score=74, Evalue=1e-13, Organism=Escherichia coli, GI1789578, Length=236, Percent_Identity=34.3220338983051, Blast_Score=158, Evalue=4e-40, Organism=Escherichia coli, GI1786623, Length=216, Percent_Identity=32.8703703703704, Blast_Score=83, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17505681, Length=304, Percent_Identity=30.9210526315789, Blast_Score=133, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6319475, Length=298, Percent_Identity=30.5369127516779, Blast_Score=114, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6325188, Length=219, Percent_Identity=27.8538812785388, Blast_Score=84, Evalue=3e-17, Organism=Drosophila melanogaster, GI24651612, Length=311, Percent_Identity=28.6173633440514, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI281365769, Length=224, Percent_Identity=29.4642857142857, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24660002, Length=224, Percent_Identity=29.4642857142857, Blast_Score=87, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014119 - InterPro: IPR000092 - InterPro: IPR017446 - InterPro: IPR008949 [H]
Pfam domain/function: PF00348 polyprenyl_synt [H]
EC number: =2.5.1.30 [H]
Molecular weight: Translated: 34815; Mature: 34815
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS00723 POLYPRENYL_SYNTHET_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQELLEYLGAIQPKVNETLAAETGTLNTMVQPVATHVLSAGGKRLRPLLAILFARALGRG CHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC GDDIYPLACSVELLHSATLLHDDIIDDAALRRGLPAAHTLFGSTRTILAGDALLALANLI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHH VSRYGDTRLTECIARAIIETATGEIAEIEYLRSTGHPQETYIEIIKGKTAWMIQASCQLG HHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCCCC AIAAGATAQQEQAACDFGMNLGIAFQIVDDALDFSPSAGETGKPVAGDLREGKLTPPLHM HHCCCCCCHHHHHHHHCCCCCCCCEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH YLERLEGADRQEFLHKFTTGTFSDADVDNVARAVRGQGLDKATRDLADTYLKKAADALHM HHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LDESREKTVLRQTVDYVKNRSR HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQELLEYLGAIQPKVNETLAAETGTLNTMVQPVATHVLSAGGKRLRPLLAILFARALGRG CHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC GDDIYPLACSVELLHSATLLHDDIIDDAALRRGLPAAHTLFGSTRTILAGDALLALANLI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHH VSRYGDTRLTECIARAIIETATGEIAEIEYLRSTGHPQETYIEIIKGKTAWMIQASCQLG HHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCCCC AIAAGATAQQEQAACDFGMNLGIAFQIVDDALDFSPSAGETGKPVAGDLREGKLTPPLHM HHCCCCCCHHHHHHHHCCCCCCCCEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH YLERLEGADRQEFLHKFTTGTFSDADVDNVARAVRGQGLDKATRDLADTYLKKAADALHM HHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LDESREKTVLRQTVDYVKNRSR HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 2121900; 9720033 [H]