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The map label for this gene is yjbQ [C]

Identifier: 78358215

GI number: 78358215

Start: 3163078

End: 3163476

Strand: Direct

Name: yjbQ [C]

Synonym: Dde_3175

Alternate gene names: 78358215

Gene position: 3163078-3163476 (Clockwise)

Preceding gene: 78358214

Following gene: 78358216

Centisome position: 84.8

GC content: 57.39

Gene sequence:

>399_bases
TTGATAACATTCCACGTTCAGACACACCGCCGCGAAGAGCTTGTAGACATCACCGCCCACATCCGCAGACTGGCAGGCGA
ACAGGGCTGGCGCCATGGGGCGCTGCTTGTATACTGCCCTCACACCACCGGCGCCATAACAGTAAATGAAGGGGCCGATC
CGGATGTCGCGCGCGATATCACCGCAAACATGAACAAGCTCGTTCCGCGGCATGGCGACTATCGCCACGCCGAAGGCAAT
TCCGACGCGCACATCAAATCAGGCATGTTCGGGTGCGGACAGATGCTTATTGTTGAAGACGGTGACATCATGCTGGGAAC
ATGGCAGAAAGTGTATTTCTGCGAATTTGACGGCCCGCGGCAACGCACGGTATGGGTGCAGTTCATGGCCGGCAGCTGA

Upstream 100 bases:

>100_bases
GCCACAGGCGTTGTGCGGTTTTACGGCGCCCACGTCCGCCACGACTGACCGGCCGCAGCACAGCAGCCGCAGCGGGGCGA
AATCACACAAGGATTCTGTT

Downstream 100 bases:

>100_bases
CAGCTGTCCCGCTGCGATAATCCCCTGCCGCAGCATGCTCTTATCCGCTCATGCCGCGGCAGACTTTTTTCTGCCAATAC
ATACACACGGAAGGATATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MITFHVQTHRREELVDITAHIRRLAGEQGWRHGALLVYCPHTTGAITVNEGADPDVARDITANMNKLVPRHGDYRHAEGN
SDAHIKSGMFGCGQMLIVEDGDIMLGTWQKVYFCEFDGPRQRTVWVQFMAGS

Sequences:

>Translated_132_residues
MITFHVQTHRREELVDITAHIRRLAGEQGWRHGALLVYCPHTTGAITVNEGADPDVARDITANMNKLVPRHGDYRHAEGN
SDAHIKSGMFGCGQMLIVEDGDIMLGTWQKVYFCEFDGPRQRTVWVQFMAGS
>Mature_132_residues
MITFHVQTHRREELVDITAHIRRLAGEQGWRHGALLVYCPHTTGAITVNEGADPDVARDITANMNKLVPRHGDYRHAEGN
SDAHIKSGMFGCGQMLIVEDGDIMLGTWQKVYFCEFDGPRQRTVWVQFMAGS

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=86, Percent_Identity=39.5348837209302, Blast_Score=62, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221476594, Length=78, Percent_Identity=42.3076923076923, Blast_Score=70, Evalue=5e-13,
Organism=Drosophila melanogaster, GI221476589, Length=78, Percent_Identity=42.3076923076923, Blast_Score=69, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 14865; Mature: 14865

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITFHVQTHRREELVDITAHIRRLAGEQGWRHGALLVYCPHTTGAITVNEGADPDVARDI
CEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEECCCCCCCCHHHH
TANMNKLVPRHGDYRHAEGNSDAHIKSGMFGCGQMLIVEDGDIMLGTWQKVYFCEFDGPR
HCCHHHCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCEEEECCCEEEEEECCCCC
QRTVWVQFMAGS
CEEEEEEEEECC
>Mature Secondary Structure
MITFHVQTHRREELVDITAHIRRLAGEQGWRHGALLVYCPHTTGAITVNEGADPDVARDI
CEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEECCCCCCCCHHHH
TANMNKLVPRHGDYRHAEGNSDAHIKSGMFGCGQMLIVEDGDIMLGTWQKVYFCEFDGPR
HCCHHHCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCEEEECCCEEEEEECCCCC
QRTVWVQFMAGS
CEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]