| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78358203
Identifier: 78358203
GI number: 78358203
Start: 3151595
End: 3151945
Strand: Direct
Name: 78358203
Synonym: Dde_3163
Alternate gene names: NA
Gene position: 3151595-3151945 (Clockwise)
Preceding gene: 78358202
Following gene: 78358204
Centisome position: 84.49
GC content: 55.27
Gene sequence:
>351_bases ATGCCGCGCTGCCGTAACCTGTACACGGCAGGCACAGCGGCATCCGCGGAAAGACATGCCATGGTCATCGGTATTCTGAC AGTAGAGTACACGCTGCACGGCAACGACTCGCTCAAAGGCAAACGCAGAGTTGCCTCCAGCCTGAAAGCCAAGGTCCGCG CCAAGTTCAACGTATCCATTGCAGAAATTGCCAATCAGGATTCGCTTACACGTCTTTCGCTGGCCGTGGTCACCGTAAGC AACAGCGAAAAGCACCTGCAGAGCAGGCTTACCAAGTGCCTGAGCATGATGGAAGCAGCCTGCCCCGAAGAAATGACCTA CAGCGATATGGAATTTTTCGGCGCCGAGTAG
Upstream 100 bases:
>100_bases TAGGCGACATCATCGAAGCCTTTGAAGAAGTCGAAGAAGCAGCGACCCTCGATTAAACACTCCCCCTGCGGGGCGCTGCG GCGCCCCGCAGGATTATACC
Downstream 100 bases:
>100_bases CGCCAAAGGAACACCGCCATGCGGGAAAGCACAAACCACGGCATGCCCGCGGCACGCATTGCCGAAATACTGCGCCGCGA AGACGACTTTCTCATTGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MPRCRNLYTAGTAASAERHAMVIGILTVEYTLHGNDSLKGKRRVASSLKAKVRAKFNVSIAEIANQDSLTRLSLAVVTVS NSEKHLQSRLTKCLSMMEAACPEEMTYSDMEFFGAE
Sequences:
>Translated_116_residues MPRCRNLYTAGTAASAERHAMVIGILTVEYTLHGNDSLKGKRRVASSLKAKVRAKFNVSIAEIANQDSLTRLSLAVVTVS NSEKHLQSRLTKCLSMMEAACPEEMTYSDMEFFGAE >Mature_115_residues PRCRNLYTAGTAASAERHAMVIGILTVEYTLHGNDSLKGKRRVASSLKAKVRAKFNVSIAEIANQDSLTRLSLAVVTVSN SEKHLQSRLTKCLSMMEAACPEEMTYSDMEFFGAE
Specific function: Unknown
COG id: COG1550
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12757; Mature: 12626
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRCRNLYTAGTAASAERHAMVIGILTVEYTLHGNDSLKGKRRVASSLKAKVRAKFNVSI CCCCCCEECCCCCCCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHH AEIANQDSLTRLSLAVVTVSNSEKHLQSRLTKCLSMMEAACPEEMTYSDMEFFGAE HHHCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCC >Mature Secondary Structure PRCRNLYTAGTAASAERHAMVIGILTVEYTLHGNDSLKGKRRVASSLKAKVRAKFNVSI CCCCCEECCCCCCCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHH AEIANQDSLTRLSLAVVTVSNSEKHLQSRLTKCLSMMEAACPEEMTYSDMEFFGAE HHHCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA