| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358157
Identifier: 78358157
GI number: 78358157
Start: 3108090
End: 3109004
Strand: Direct
Name: 78358157
Synonym: Dde_3117
Alternate gene names: NA
Gene position: 3108090-3109004 (Clockwise)
Preceding gene: 78358156
Following gene: 78358161
Centisome position: 83.32
GC content: 53.11
Gene sequence:
>915_bases ATGAGTCGTCTTGAACCCGCTGCCAATCTGTTTGATATCCTGCACCACTTCTGGGAGCACCCGCGTACGGAACGGTATGT GGCGCATACGCTCATCATTATTTTTCTGCTCAGCATCGCCACCATAGAAATGAACAGGCACGGCCTGCTGCCGCCCCGGA TGGCTGCGCTGACCCCCACAAACCACTTTCATGCGGTCAATCTGGCGTTCACCATGCTGCTGGTGCTCGAGGTCATGAGC CTTATTTTCGTCCTGTCCACCTCTGTCACCAAATCCCTTGGCAAGCAGCTTGAAATACTGACACTTATATTGCTGCGCAA TGCTTTCAAATCGCTTTCGCAGATGCACGAACCCATATCCGTCCTGCAGGACACCGAGGCACTGCTGCATGTTGCCGCAT CGGGTACGGCAGCACTCAGCATCTTCGTTATTCTGGGTGTTTATTACAGAGTACAGCGTTTTCAGGGCTATCTCAAAGAT CCCACGGAACGTATGCGTTATGTGCTCAGCAAAAAAATTCTCGCACTGGTGCTGTTTGTGGCCTTTGTAAGCATAGGGCT GTATGACGCGCTGGATTTTCTCATCTACGGCACGCACCACGATTTTTTCATCACCTTCTACACCGTGCTGATATTTGCCG ACATTCTGCTGGTGCTTATCACGCAGCGGTTCATGCCCAACTTTCACGCGGTGTTCCGTAATTCCGGCTTTGTCATTGCC ACGCTGTTCATGCGCGTGGCTCTTTCAGCACCGCCGTTCTATGCCGCGGGCATAGGCGTGGGTGCAGCGCTATTTGCCCT TGCGGTGGCCTATGCCACCAGCGTATTTTCGCACGGCACATTTTCCACGGTCAATTTCAACCGCGGGGCCGACGCAGAAT ACAAGCCGCCGTGCAAAAACTGTCAGGAACCATAG
Upstream 100 bases:
>100_bases GCCCGCAAACCGCCGGAGACCGGCCCGCAGCATATTCCCCTTGCCCTGAATGATTTTTCGCGTACTATTATAATATGTTT CCATCGCCACGGAGTACGTC
Downstream 100 bases:
>100_bases CACCCCGCACAGCACAGTCAGCCACGGGCAGCCGCGGCTGACGACACCGGCACCAAAAAAAGCCGCGTCCTCAGTCGGCG CGGCTTTCATTGTGTCCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MSRLEPAANLFDILHHFWEHPRTERYVAHTLIIIFLLSIATIEMNRHGLLPPRMAALTPTNHFHAVNLAFTMLLVLEVMS LIFVLSTSVTKSLGKQLEILTLILLRNAFKSLSQMHEPISVLQDTEALLHVAASGTAALSIFVILGVYYRVQRFQGYLKD PTERMRYVLSKKILALVLFVAFVSIGLYDALDFLIYGTHHDFFITFYTVLIFADILLVLITQRFMPNFHAVFRNSGFVIA TLFMRVALSAPPFYAAGIGVGAALFALAVAYATSVFSHGTFSTVNFNRGADAEYKPPCKNCQEP
Sequences:
>Translated_304_residues MSRLEPAANLFDILHHFWEHPRTERYVAHTLIIIFLLSIATIEMNRHGLLPPRMAALTPTNHFHAVNLAFTMLLVLEVMS LIFVLSTSVTKSLGKQLEILTLILLRNAFKSLSQMHEPISVLQDTEALLHVAASGTAALSIFVILGVYYRVQRFQGYLKD PTERMRYVLSKKILALVLFVAFVSIGLYDALDFLIYGTHHDFFITFYTVLIFADILLVLITQRFMPNFHAVFRNSGFVIA TLFMRVALSAPPFYAAGIGVGAALFALAVAYATSVFSHGTFSTVNFNRGADAEYKPPCKNCQEP >Mature_303_residues SRLEPAANLFDILHHFWEHPRTERYVAHTLIIIFLLSIATIEMNRHGLLPPRMAALTPTNHFHAVNLAFTMLLVLEVMSL IFVLSTSVTKSLGKQLEILTLILLRNAFKSLSQMHEPISVLQDTEALLHVAASGTAALSIFVILGVYYRVQRFQGYLKDP TERMRYVLSKKILALVLFVAFVSIGLYDALDFLIYGTHHDFFITFYTVLIFADILLVLITQRFMPNFHAVFRNSGFVIAT LFMRVALSAPPFYAAGIGVGAALFALAVAYATSVFSHGTFSTVNFNRGADAEYKPPCKNCQEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34077; Mature: 33945
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLEPAANLFDILHHFWEHPRTERYVAHTLIIIFLLSIATIEMNRHGLLPPRMAALTPT CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCC NHFHAVNLAFTMLLVLEVMSLIFVLSTSVTKSLGKQLEILTLILLRNAFKSLSQMHEPIS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLQDTEALLHVAASGTAALSIFVILGVYYRVQRFQGYLKDPTERMRYVLSKKILALVLFV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AFVSIGLYDALDFLIYGTHHDFFITFYTVLIFADILLVLITQRFMPNFHAVFRNSGFVIA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHH TLFMRVALSAPPFYAAGIGVGAALFALAVAYATSVFSHGTFSTVNFNRGADAEYKPPCKN HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCC CQEP CCCC >Mature Secondary Structure SRLEPAANLFDILHHFWEHPRTERYVAHTLIIIFLLSIATIEMNRHGLLPPRMAALTPT CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCC NHFHAVNLAFTMLLVLEVMSLIFVLSTSVTKSLGKQLEILTLILLRNAFKSLSQMHEPIS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLQDTEALLHVAASGTAALSIFVILGVYYRVQRFQGYLKDPTERMRYVLSKKILALVLFV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH AFVSIGLYDALDFLIYGTHHDFFITFYTVLIFADILLVLITQRFMPNFHAVFRNSGFVIA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHH TLFMRVALSAPPFYAAGIGVGAALFALAVAYATSVFSHGTFSTVNFNRGADAEYKPPCKN HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCC CQEP CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA