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The map label for this gene is yvrC [H]

Identifier: 78358146

GI number: 78358146

Start: 3096652

End: 3097590

Strand: Direct

Name: yvrC [H]

Synonym: Dde_3106

Alternate gene names: 78358146

Gene position: 3096652-3097590 (Clockwise)

Preceding gene: 78358145

Following gene: 78358147

Centisome position: 83.01

GC content: 64.11

Gene sequence:

>939_bases
ATGACAACCTTCCGACATCTCAGCGCCGCGCTGTGGTGCGCCTTTGCCCTGCTGCTGGCACCTTTGTCCGTTGCCGCGCA
GCAGCACGCAGTAAGCATAACCGACGATACAGGCCGCACCGTGCAGCTGGATGCTCCTGCCCGGCGCATCATCGCCCTGT
ACGGTGCCTTTAACGAGACACTGGCCGCCATGGGCCTGCAGGACAGGCTCATAGCACGCACCAATGCCGACCACTGGCCG
GAATCCATCCGCAGCCTGCCCGCCATCGGCACGCACATGCGGCCCAACCTTGAACTGGTGGCCGGCATGGCTCCCGACCT
TGTGCTGCAGATGAGCGGACGCAAAGAAGCCGGGCAGGCCGTGGACGACCTGCGCGCGCTGGGCATTCCCGTGGCGGAAT
TTCACGTTGCCGACTTTGAGCAGCTGTTTTCCGTCATCGCCCGTCTGGGAGTGCTGACCGGAGAACAGGGCAAGGCAGCG
GCACTTACCGCACAGTTGCGCAACCGTCTGGAAACGGTGCGCGCAGCCGTAGCCGGAGAACACCGCCCCTCGGTCTTTTT
TGAAGTCCGTTACCCCAACCTGCTGGGGGCGGGCACAGGTTCCATCGTCAATGACATTATCGGCCGCGCAGGCGGTGCAA
ACTGCCTCGTGTCCGACAAAAAACTGGAGCGCCCCTCGGAAGAGGAACTGCTGCGCCTCGACCCCGAAGTCTACATTGTG
CAGCACGGCCCCATGAATAAAACACCGGTGCCGCCGGACGCGCGGCCGCACTTCCGCACACTGCGGGCGGTGCGTCATGC
GCGCTGGCTTGTTGTGGAAGAGGCGTGTTATTCACGCCCCGGCCCCAGAGCGGTGGATGCGGTGGAAGAGCTTGCGCGCT
TTCTGCATCCCTCGCGCTTCACCCTGCAGCCCCCGGCTGCCGGTCAAGGAGAACCCTAG

Upstream 100 bases:

>100_bases
TCTGCCGGATATATGAAACCTCTGTCCGCGTATTCCGGCATCCGGACTGCGGGCTGCCGCAGGCTCTTTTCATGCCCGCC
CACACGCAGAGAAAAACGCC

Downstream 100 bases:

>100_bases
TGTACGGTACGTTGTACGGTATCGGCGTCGGCCCCGGCGACCCCGACCTGCTTACCATAAAGGCGGTCAAGGCTCTGGCC
CGCACGGACGTGGTCTTTGC

Product: iron compound ABC transporter periplasmic iron compount-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MTTFRHLSAALWCAFALLLAPLSVAAQQHAVSITDDTGRTVQLDAPARRIIALYGAFNETLAAMGLQDRLIARTNADHWP
ESIRSLPAIGTHMRPNLELVAGMAPDLVLQMSGRKEAGQAVDDLRALGIPVAEFHVADFEQLFSVIARLGVLTGEQGKAA
ALTAQLRNRLETVRAAVAGEHRPSVFFEVRYPNLLGAGTGSIVNDIIGRAGGANCLVSDKKLERPSEEELLRLDPEVYIV
QHGPMNKTPVPPDARPHFRTLRAVRHARWLVVEEACYSRPGPRAVDAVEELARFLHPSRFTLQPPAAGQGEP

Sequences:

>Translated_312_residues
MTTFRHLSAALWCAFALLLAPLSVAAQQHAVSITDDTGRTVQLDAPARRIIALYGAFNETLAAMGLQDRLIARTNADHWP
ESIRSLPAIGTHMRPNLELVAGMAPDLVLQMSGRKEAGQAVDDLRALGIPVAEFHVADFEQLFSVIARLGVLTGEQGKAA
ALTAQLRNRLETVRAAVAGEHRPSVFFEVRYPNLLGAGTGSIVNDIIGRAGGANCLVSDKKLERPSEEELLRLDPEVYIV
QHGPMNKTPVPPDARPHFRTLRAVRHARWLVVEEACYSRPGPRAVDAVEELARFLHPSRFTLQPPAAGQGEP
>Mature_311_residues
TTFRHLSAALWCAFALLLAPLSVAAQQHAVSITDDTGRTVQLDAPARRIIALYGAFNETLAAMGLQDRLIARTNADHWPE
SIRSLPAIGTHMRPNLELVAGMAPDLVLQMSGRKEAGQAVDDLRALGIPVAEFHVADFEQLFSVIARLGVLTGEQGKAAA
LTAQLRNRLETVRAAVAGEHRPSVFFEVRYPNLLGAGTGSIVNDIIGRAGGANCLVSDKKLERPSEEELLRLDPEVYIVQ
HGPMNKTPVPPDARPHFRTLRAVRHARWLVVEEACYSRPGPRAVDAVEELARFLHPSRFTLQPPAAGQGEP

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786353, Length=200, Percent_Identity=25.5, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 33953; Mature: 33822

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTFRHLSAALWCAFALLLAPLSVAAQQHAVSITDDTGRTVQLDAPARRIIALYGAFNET
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCHHHHHHHHHHHHHH
LAAMGLQDRLIARTNADHWPESIRSLPAIGTHMRPNLELVAGMAPDLVLQMSGRKEAGQA
HHHHCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHEEECCCCCCEEEECCCCHHHHH
VDDLRALGIPVAEFHVADFEQLFSVIARLGVLTGEQGKAAALTAQLRNRLETVRAAVAGE
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
HRPSVFFEVRYPNLLGAGTGSIVNDIIGRAGGANCLVSDKKLERPSEEELLRLDPEVYIV
CCCCEEEEEECCCEECCCCHHHHHHHHHCCCCCCEEECCHHCCCCCHHHHHCCCCEEEEE
QHGPMNKTPVPPDARPHFRTLRAVRHARWLVVEEACYSRPGPRAVDAVEELARFLHPSRF
ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEHHHHCCCCCCHHHHHHHHHHHHHCCCCE
TLQPPAAGQGEP
EECCCCCCCCCC
>Mature Secondary Structure 
TTFRHLSAALWCAFALLLAPLSVAAQQHAVSITDDTGRTVQLDAPARRIIALYGAFNET
CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCHHHHHHHHHHHHHH
LAAMGLQDRLIARTNADHWPESIRSLPAIGTHMRPNLELVAGMAPDLVLQMSGRKEAGQA
HHHHCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHEEECCCCCCEEEECCCCHHHHH
VDDLRALGIPVAEFHVADFEQLFSVIARLGVLTGEQGKAAALTAQLRNRLETVRAAVAGE
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
HRPSVFFEVRYPNLLGAGTGSIVNDIIGRAGGANCLVSDKKLERPSEEELLRLDPEVYIV
CCCCEEEEEECCCEECCCCHHHHHHHHHCCCCCCEEECCHHCCCCCHHHHHCCCCEEEEE
QHGPMNKTPVPPDARPHFRTLRAVRHARWLVVEEACYSRPGPRAVDAVEELARFLHPSRF
ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEHHHHCCCCCCHHHHHHHHHHHHHCCCCE
TLQPPAAGQGEP
EECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]