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The map label for this gene is yfcE [H]

Identifier: 78358130

GI number: 78358130

Start: 3080525

End: 3081085

Strand: Reverse

Name: yfcE [H]

Synonym: Dde_3090

Alternate gene names: 78358130

Gene position: 3081085-3080525 (Counterclockwise)

Preceding gene: 78358131

Following gene: 78358129

Centisome position: 82.6

GC content: 62.75

Gene sequence:

>561_bases
ATGAAAATACTATTTGTTTCCGACATACACGGCAGTGCAGGCGCCGCCCGCACCGTGCTGGAAAAAGCGGAGGCCATGCA
GCCCGATGCCGTGGCCCTGCTGGGGGATGCGCTTTACCACGGCCCGCGCAACCCGCTGCCCGCGGATTATGATCCCAAAG
GCGTGGCGGCACTGCTTAACGGCTGGAAAAACCGGATAGTGGCAGTGCGCGGCAACTGCGACAGCGAAGTGGATCAGATG
CTTATCGAGTACCCCATGATGAGCGACTTCGCGTGGGTGCTGGCGGGCGGCCGCAGGCTGTTTCTGACCCACGGCCACAG
GTATTCGCCCGATAACCTGCCGCCGCTGGCAGACGGTGACGTATTTGTCTACGGGCATACGCATGTGCCGCAGACCGGGA
CAGCCGCACTTGCCGGCGGGGGCGTGGTGCACCTGTGGAATCCCGGCTCGTGCTCGCTGCCCAAAAGCGGGTACGCGGCT
TCATACGCGGTGCTGGAAGACGGAGTGTTCCGCGTATGCGGTCTGGACGGTTCCGTACTGCTTACCGATACGCTTGGCTA
G

Upstream 100 bases:

>100_bases
TCGAAGTGCTGTAGACCGGTGACCGGCAGGCTTTTTGCCCCTGCGTGCTGCGGGGGCTTTTTTATTTTTTACGCAATGCT
TGGATTATGGTGCTGATACT

Downstream 100 bases:

>100_bases
CGGCGCCGCGGGCGCAGAGGAAATCTTATGATGCAGCCGGAAGAATATACAGCAGCCGATGCCGTTGAATCCTGTCCGCA
GCAGAGTCTTTCCGGACACG

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKILFVSDIHGSAGAARTVLEKAEAMQPDAVALLGDALYHGPRNPLPADYDPKGVAALLNGWKNRIVAVRGNCDSEVDQM
LIEYPMMSDFAWVLAGGRRLFLTHGHRYSPDNLPPLADGDVFVYGHTHVPQTGTAALAGGGVVHLWNPGSCSLPKSGYAA
SYAVLEDGVFRVCGLDGSVLLTDTLG

Sequences:

>Translated_186_residues
MKILFVSDIHGSAGAARTVLEKAEAMQPDAVALLGDALYHGPRNPLPADYDPKGVAALLNGWKNRIVAVRGNCDSEVDQM
LIEYPMMSDFAWVLAGGRRLFLTHGHRYSPDNLPPLADGDVFVYGHTHVPQTGTAALAGGGVVHLWNPGSCSLPKSGYAA
SYAVLEDGVFRVCGLDGSVLLTDTLG
>Mature_186_residues
MKILFVSDIHGSAGAARTVLEKAEAMQPDAVALLGDALYHGPRNPLPADYDPKGVAALLNGWKNRIVAVRGNCDSEVDQM
LIEYPMMSDFAWVLAGGRRLFLTHGHRYSPDNLPPLADGDVFVYGHTHVPQTGTAALAGGGVVHLWNPGSCSLPKSGYAA
SYAVLEDGVFRVCGLDGSVLLTDTLG

Specific function: Shows phosphodiesterase activity [H]

COG id: COG0622

COG function: function code R; Predicted phosphoesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]

Homologues:

Organism=Escherichia coli, GI1788638, Length=184, Percent_Identity=47.2826086956522, Blast_Score=169, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR020935
- InterPro:   IPR000979 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 19716; Mature: 19716

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILFVSDIHGSAGAARTVLEKAEAMQPDAVALLGDALYHGPRNPLPADYDPKGVAALLN
CEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
GWKNRIVAVRGNCDSEVDQMLIEYPMMSDFAWVLAGGRRLFLTHGHRYSPDNLPPLADGD
HHCCEEEEEECCCCHHHHHHHHHCCCHHHHHEEEECCEEEEEECCCCCCCCCCCCCCCCC
VFVYGHTHVPQTGTAALAGGGVVHLWNPGSCSLPKSGYAASYAVLEDGVFRVCGLDGSVL
EEEEECCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCCEEEEEHHCCEEEEECCCCCEE
LTDTLG
EEECCC
>Mature Secondary Structure
MKILFVSDIHGSAGAARTVLEKAEAMQPDAVALLGDALYHGPRNPLPADYDPKGVAALLN
CEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
GWKNRIVAVRGNCDSEVDQMLIEYPMMSDFAWVLAGGRRLFLTHGHRYSPDNLPPLADGD
HHCCEEEEEECCCCHHHHHHHHHCCCHHHHHEEEECCEEEEEECCCCCCCCCCCCCCCCC
VFVYGHTHVPQTGTAALAGGGVVHLWNPGSCSLPKSGYAASYAVLEDGVFRVCGLDGSVL
EEEEECCCCCCCCCEEECCCCEEEEECCCCCCCCCCCCCEEEEEHHCCEEEEECCCCCEE
LTDTLG
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]