| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358103
Identifier: 78358103
GI number: 78358103
Start: 3055750
End: 3056544
Strand: Direct
Name: 78358103
Synonym: Dde_3063
Alternate gene names: NA
Gene position: 3055750-3056544 (Clockwise)
Preceding gene: 78358102
Following gene: 78358105
Centisome position: 81.92
GC content: 53.96
Gene sequence:
>795_bases ATGACAGCAATACGCCGTGTATATATTGCGCTTATGATCACGCTGGTTGTCTGCATTCATGCGACAGCGGCCCGCAGCGC ACCTCCGGAAAGCATCTCGCTGGCCACACATATCATGTGCCCGTACAGTTTTTACACTGCAGAAGGCACATTTGACGGAA TGGCTGTACGTGCTGTCCGATATGCACTTGCACGTATGAATGTGGCACTCGATCTTGTGGTCGTACCGTGGGGACGTGCA CAGATGATGGTCAGGAACGGCTATTCCGACGGTTTTTTTGCCGCATCCCAGAACGAGGCACGCGACGTGTACGCCACGCA TTCTGTCACCATTGCGGAACAACAGTGGGACTGGTGCATACTGAGCGAAAGCACCATGACGCCGGATATGAAAGAATTTA AAGATACGGCCTGCGTGGGTGCCTTCAACGGTTCCAACATGCTGTACTGGCTGGAATGCAACGAATACAAAGTGCTGGGT ACGCCGCCGAATACCCGTCTGCTGGTGGAAATGCTGCTGGCCCGGCGCATAGACGCCATTGTGGCCAATGATCTTGTGCT TGAAAAAATAATCACCGCGGAAAATCTGTCTGACAGGCTGCGGGTGTACCCCCTCAAAAACAAACCGCTGGGGGTCTATT TTTCAAACACATTTCTGGCGGCCCACCCCGGATTTCTGGAAACCTTCAACCGGCATGTGCTGGAATACCGGAAAACGCCC GAAGCCCGGACCGCATTTGACTGCTTCACCGATCCCTGTTCGCCGTTTGCTCCGCAGCCAGAGACACCGCACTGA
Upstream 100 bases:
>100_bases TCCCGCACGGTTCACGGAGTACCGGACCGCGCCTGTTTTTTAACTGCACAAAAAAAATAACGTCACTGCATAGCCGGTCT GCTCATGGTACTTCTTTGCC
Downstream 100 bases:
>100_bases TCTGCCGTTTCCGGCCCCGTCAGCCCCCCTGCACAACAGAACCGCGTTCAGGAAGCACAAGTTCCGCGGCAAAGCTGTCC GGCAGATGCCCGTCGTGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MTAIRRVYIALMITLVVCIHATAARSAPPESISLATHIMCPYSFYTAEGTFDGMAVRAVRYALARMNVALDLVVVPWGRA QMMVRNGYSDGFFAASQNEARDVYATHSVTIAEQQWDWCILSESTMTPDMKEFKDTACVGAFNGSNMLYWLECNEYKVLG TPPNTRLLVEMLLARRIDAIVANDLVLEKIITAENLSDRLRVYPLKNKPLGVYFSNTFLAAHPGFLETFNRHVLEYRKTP EARTAFDCFTDPCSPFAPQPETPH
Sequences:
>Translated_264_residues MTAIRRVYIALMITLVVCIHATAARSAPPESISLATHIMCPYSFYTAEGTFDGMAVRAVRYALARMNVALDLVVVPWGRA QMMVRNGYSDGFFAASQNEARDVYATHSVTIAEQQWDWCILSESTMTPDMKEFKDTACVGAFNGSNMLYWLECNEYKVLG TPPNTRLLVEMLLARRIDAIVANDLVLEKIITAENLSDRLRVYPLKNKPLGVYFSNTFLAAHPGFLETFNRHVLEYRKTP EARTAFDCFTDPCSPFAPQPETPH >Mature_263_residues TAIRRVYIALMITLVVCIHATAARSAPPESISLATHIMCPYSFYTAEGTFDGMAVRAVRYALARMNVALDLVVVPWGRAQ MMVRNGYSDGFFAASQNEARDVYATHSVTIAEQQWDWCILSESTMTPDMKEFKDTACVGAFNGSNMLYWLECNEYKVLGT PPNTRLLVEMLLARRIDAIVANDLVLEKIITAENLSDRLRVYPLKNKPLGVYFSNTFLAAHPGFLETFNRHVLEYRKTPE ARTAFDCFTDPCSPFAPQPETPH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29694; Mature: 29562
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIRRVYIALMITLVVCIHATAARSAPPESISLATHIMCPYSFYTAEGTFDGMAVRAVR CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEECCCCCCHHHHHHHH YALARMNVALDLVVVPWGRAQMMVRNGYSDGFFAASQNEARDVYATHSVTIAEQQWDWCI HHHHHHCEEEEEEEECCCCEEEEEECCCCCCEEECCCCCCCEEEEEEEEEEECCCCCEEE LSESTMTPDMKEFKDTACVGAFNGSNMLYWLECNEYKVLGTPPNTRLLVEMLLARRIDAI EECCCCCCCHHHHCCCCEEEEECCCCEEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHH VANDLVLEKIITAENLSDRLRVYPLKNKPLGVYFSNTFLAAHPGFLETFNRHVLEYRKTP HHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECEEEEECCCHHHHHHHHHHHHHCCC EARTAFDCFTDPCSPFAPQPETPH CHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TAIRRVYIALMITLVVCIHATAARSAPPESISLATHIMCPYSFYTAEGTFDGMAVRAVR CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEECCCCCCHHHHHHHH YALARMNVALDLVVVPWGRAQMMVRNGYSDGFFAASQNEARDVYATHSVTIAEQQWDWCI HHHHHHCEEEEEEEECCCCEEEEEECCCCCCEEECCCCCCCEEEEEEEEEEECCCCCEEE LSESTMTPDMKEFKDTACVGAFNGSNMLYWLECNEYKVLGTPPNTRLLVEMLLARRIDAI EECCCCCCCHHHHCCCCEEEEECCCCEEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHH VANDLVLEKIITAENLSDRLRVYPLKNKPLGVYFSNTFLAAHPGFLETFNRHVLEYRKTP HHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECEEEEECCCHHHHHHHHHHHHHCCC EARTAFDCFTDPCSPFAPQPETPH CHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA