| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is dhaT [H]
Identifier: 78358102
GI number: 78358102
Start: 3054413
End: 3055591
Strand: Direct
Name: dhaT [H]
Synonym: Dde_3062
Alternate gene names: 78358102
Gene position: 3054413-3055591 (Clockwise)
Preceding gene: 78358101
Following gene: 78358103
Centisome position: 81.88
GC content: 58.44
Gene sequence:
>1179_bases ATGATGCATTTTAATTTTCACATGCCCACACGGCTTATTTTCGGACAAGGCACCCTGCGCCGGCTGGCCGGAGAACCCCT GCCGGGCACCAGAGCACTGGTTGTGGTCAGCGCCGGTGGTTCCATGAAAAAGCTCGGGTATCTGGAACAGGTACGCTCGC TGCTGGCGCAAAACGGCTGCGAAAGCGAAGTGTATGATCGCATACAGCCAAACCCTGTCAAAGAGCATGTGATGGAAGGA GCCGCGCTGGCACGCTCGGCCCGCTGCGATTTCATCGTCGGGCTGGGAGGCGGCAGCAGCATCGATTCCGCAAAATCCAT CGCCCTCATGGCCGCAAACCCCGGAGACTACTGGGACTACATGGGCGGCACCGGCGGCGGCAAAACACCGCCGGAACCGG CGCTGCCTGTCATTGCCATTCCCACCACCGCGGGTACCGGCACAGAGGCCGACCCGTGGACAGTCATCACCAACACCGCC ACGCGTGAAAAAATAGGCTGGGGCAACGACTCCACGTTTCCCCGTTTTTCCATCATCGACCCCATGCTGATGCTCAGCGT ACCGCCCAGTGTCACCGCCTATACCGGCATGGACGCCTTTTTCCACGCCACAGAAGCATATCTGGCCACCTGCAACCAGC CCTCCAGCGACCTGCTGGCCCAGCAGGCCATCCATCTTATCTCGACATTTCTGCCGCAGTGCGTGCACGACGGAAGCAAC CCCGAAACACGCACCATGCTTGCGTGGGCATCCACAGCCGCCGGCATCTGCGAATCACTGTCGTCGTGCATATCGCACCA TTCGCTTGAGCATGCGCTTTCGGCATTTTATCCCGACATTCCGCATGGTGCCGGACTGGTCATGCTGTCCGAAGCGTACT TCAGCCATCTGGCCAGATTTGTTCCCGAAAGAATGACGCATCTGGGCTATTTCATGGGTGTAGATGTGGACAGCCTGCCC GAAGAACGTCAGCCTGAGGCATTTGTTCACGCGCTGGCAAAGCTGAAAGCCGACTGCGGGCTGGCAGAACTGAAAATGTC TGATTTCGGTGTGAAGCGCTCCGACCTGCCCGCGCTTGCCCGTAATGCACGCGAAAGCATGGGCGGACTTTTTCATGTGA CGCCGGTGGAACTGGACGAAGCCGCTGTCCTTGATATTTTCGAAAAAGCCTACAGATAA
Upstream 100 bases:
>100_bases CATACCTGCTAGCCTGCTGTAAACTTGCCACACATGACAGGGCAGCCGCACGTCGCGCGGTCTGCCGCCGCACAGTAAAT CCGCCGGAAGGAGTGTTATC
Downstream 100 bases:
>100_bases TCTCCGTCACCGCACCGCGGGAACGCCCTGTGCGCTCCCGCGGTGCGGCCGTATCCTGTCCCGCACGGTTCACGGAGTAC CGGACCGCGCCTGTTTTTTA
Product: alcohol dehydrogenase, iron-containing
Products: NA
Alternate protein names: 1,3-propanediol oxidoreductase; 3-hydroxypropionaldehyde reductase [H]
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MMHFNFHMPTRLIFGQGTLRRLAGEPLPGTRALVVVSAGGSMKKLGYLEQVRSLLAQNGCESEVYDRIQPNPVKEHVMEG AALARSARCDFIVGLGGGSSIDSAKSIALMAANPGDYWDYMGGTGGGKTPPEPALPVIAIPTTAGTGTEADPWTVITNTA TREKIGWGNDSTFPRFSIIDPMLMLSVPPSVTAYTGMDAFFHATEAYLATCNQPSSDLLAQQAIHLISTFLPQCVHDGSN PETRTMLAWASTAAGICESLSSCISHHSLEHALSAFYPDIPHGAGLVMLSEAYFSHLARFVPERMTHLGYFMGVDVDSLP EERQPEAFVHALAKLKADCGLAELKMSDFGVKRSDLPALARNARESMGGLFHVTPVELDEAAVLDIFEKAYR
Sequences:
>Translated_392_residues MMHFNFHMPTRLIFGQGTLRRLAGEPLPGTRALVVVSAGGSMKKLGYLEQVRSLLAQNGCESEVYDRIQPNPVKEHVMEG AALARSARCDFIVGLGGGSSIDSAKSIALMAANPGDYWDYMGGTGGGKTPPEPALPVIAIPTTAGTGTEADPWTVITNTA TREKIGWGNDSTFPRFSIIDPMLMLSVPPSVTAYTGMDAFFHATEAYLATCNQPSSDLLAQQAIHLISTFLPQCVHDGSN PETRTMLAWASTAAGICESLSSCISHHSLEHALSAFYPDIPHGAGLVMLSEAYFSHLARFVPERMTHLGYFMGVDVDSLP EERQPEAFVHALAKLKADCGLAELKMSDFGVKRSDLPALARNARESMGGLFHVTPVELDEAAVLDIFEKAYR >Mature_392_residues MMHFNFHMPTRLIFGQGTLRRLAGEPLPGTRALVVVSAGGSMKKLGYLEQVRSLLAQNGCESEVYDRIQPNPVKEHVMEG AALARSARCDFIVGLGGGSSIDSAKSIALMAANPGDYWDYMGGTGGGKTPPEPALPVIAIPTTAGTGTEADPWTVITNTA TREKIGWGNDSTFPRFSIIDPMLMLSVPPSVTAYTGMDAFFHATEAYLATCNQPSSDLLAQQAIHLISTFLPQCVHDGSN PETRTMLAWASTAAGICESLSSCISHHSLEHALSAFYPDIPHGAGLVMLSEAYFSHLARFVPERMTHLGYFMGVDVDSLP EERQPEAFVHALAKLKADCGLAELKMSDFGVKRSDLPALARNARESMGGLFHVTPVELDEAAVLDIFEKAYR
Specific function: Most active with substrates containing two primary alcohol groups separated by one or two carbon atoms. In the physiological direction, 3-hydroxypropionaldehyde is the preferred substrate [H]
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=397, Percent_Identity=27.9596977329975, Blast_Score=123, Evalue=3e-28, Organism=Escherichia coli, GI48994951, Length=361, Percent_Identity=34.6260387811634, Blast_Score=192, Evalue=5e-50, Organism=Escherichia coli, GI1789163, Length=366, Percent_Identity=29.2349726775956, Blast_Score=147, Evalue=9e-37, Organism=Escherichia coli, GI1787493, Length=314, Percent_Identity=31.5286624203822, Blast_Score=139, Evalue=4e-34, Organism=Escherichia coli, GI1789386, Length=372, Percent_Identity=28.2258064516129, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI87082107, Length=302, Percent_Identity=32.4503311258278, Blast_Score=125, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17537053, Length=423, Percent_Identity=26.0047281323877, Blast_Score=131, Evalue=7e-31, Organism=Saccharomyces cerevisiae, GI6321181, Length=391, Percent_Identity=31.4578005115089, Blast_Score=176, Evalue=6e-45, Organism=Drosophila melanogaster, GI24657991, Length=399, Percent_Identity=26.5664160401003, Blast_Score=109, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: =1.1.1.202 [H]
Molecular weight: Translated: 42232; Mature: 42232
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00913 ADH_IRON_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMHFNFHMPTRLIFGQGTLRRLAGEPLPGTRALVVVSAGGSMKKLGYLEQVRSLLAQNGC CCEEECCCCCEEEECCCHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCC ESEVYDRIQPNPVKEHVMEGAALARSARCDFIVGLGGGSSIDSAKSIALMAANPGDYWDY CHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEECCCCCHHHC MGGTGGGKTPPEPALPVIAIPTTAGTGTEADPWTVITNTATREKIGWGNDSTFPRFSIID CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCHHHHC PMLMLSVPPSVTAYTGMDAFFHATEAYLATCNQPSSDLLAQQAIHLISTFLPQCVHDGSN CHHHEECCCCCEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC PETRTMLAWASTAAGICESLSSCISHHSLEHALSAFYPDIPHGAGLVMLSEAYFSHLARF CCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHH VPERMTHLGYFMGVDVDSLPEERQPEAFVHALAKLKADCGLAELKMSDFGVKRSDLPALA HHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHCCCHHHEEHHHCCCCCCCHHHHH RNARESMGGLFHVTPVELDEAAVLDIFEKAYR HHHHHHHCCEEEECCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MMHFNFHMPTRLIFGQGTLRRLAGEPLPGTRALVVVSAGGSMKKLGYLEQVRSLLAQNGC CCEEECCCCCEEEECCCHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCC ESEVYDRIQPNPVKEHVMEGAALARSARCDFIVGLGGGSSIDSAKSIALMAANPGDYWDY CHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEECCCCCHHHC MGGTGGGKTPPEPALPVIAIPTTAGTGTEADPWTVITNTATREKIGWGNDSTFPRFSIID CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCHHHHC PMLMLSVPPSVTAYTGMDAFFHATEAYLATCNQPSSDLLAQQAIHLISTFLPQCVHDGSN CHHHEECCCCCEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC PETRTMLAWASTAAGICESLSSCISHHSLEHALSAFYPDIPHGAGLVMLSEAYFSHLARF CCHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHH VPERMTHLGYFMGVDVDSLPEERQPEAFVHALAKLKADCGLAELKMSDFGVKRSDLPALA HHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHCCCHHHEEHHHCCCCCCCHHHHH RNARESMGGLFHVTPVELDEAAVLDIFEKAYR HHHHHHHCCEEEECCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7721705 [H]