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The map label for this gene is yebN [C]

Identifier: 78358018

GI number: 78358018

Start: 2959862

End: 2960434

Strand: Direct

Name: yebN [C]

Synonym: Dde_2978

Alternate gene names: 78358018

Gene position: 2959862-2960434 (Clockwise)

Preceding gene: 78358017

Following gene: 78358022

Centisome position: 79.35

GC content: 61.08

Gene sequence:

>573_bases
ATGGAAACACCGGCACTGCTTGCACTGGCTGTGGCGCTGGCCATGGATGCACTGGCGGTGGCTGTGGCCACCGGATGCAG
ACTACGCACGGTATCGGCCCGTCAGACGCTTCGTCTGGCATGGCACTTCGGCCTTTTTCAGGCTGCCATGCCCATTGCGG
GGTGGTTTATGGGACAGGGCATACGAAGCTTTGTGGATGCCTGGGCGCACTGGATAGCCTTCGGCCTGCTGGCGTTCATC
GGGCTGAAAATGCTCAAGGAAGCCTTTGAACACGACGACGCGGAATGCGGCATGGCCGACCCCACCAGAGGAACGTCGCT
CATCATGCTTTCCGTGGCCACCAGCATAGACGCGCTGGCCGTGGGCGTAACACTTTCCATGCTGGGGCTGTCCATATGGA
TGCCCGCCGCGGTCATCGGGCTTGTCTGTCTGGGGCTGACCGCCGCAGGTGTGCAGCTGGGCAGAGTACTGGCCGCGTCA
TCAGCGCTTTCGCGGTATGCGGAAATACTGGGCGGCGCAGTGCTGCTGGGTATTGGTTTTAAAATTCTGCACGAAAGCGG
CGTGTTCGGCTGA

Upstream 100 bases:

>100_bases
GCCTGCACATACGGCTGACAGAAGAAATCTGCGCCGGATTGTCCGATGAAGACAAAGACGCTCTGCTGCGCTGTCTGCTT
TCCATGAACAGGATGTTCTG

Downstream 100 bases:

>100_bases
CCATTCCCGTGCTGTCAGCGGCATGAACGACACAAAAACGCCGGACTCCTCTGCGGAGTCCGGCGTTTTATCTGTATACG
GAACCGGCGGGGCTACTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
METPALLALAVALAMDALAVAVATGCRLRTVSARQTLRLAWHFGLFQAAMPIAGWFMGQGIRSFVDAWAHWIAFGLLAFI
GLKMLKEAFEHDDAECGMADPTRGTSLIMLSVATSIDALAVGVTLSMLGLSIWMPAAVIGLVCLGLTAAGVQLGRVLAAS
SALSRYAEILGGAVLLGIGFKILHESGVFG

Sequences:

>Translated_190_residues
METPALLALAVALAMDALAVAVATGCRLRTVSARQTLRLAWHFGLFQAAMPIAGWFMGQGIRSFVDAWAHWIAFGLLAFI
GLKMLKEAFEHDDAECGMADPTRGTSLIMLSVATSIDALAVGVTLSMLGLSIWMPAAVIGLVCLGLTAAGVQLGRVLAAS
SALSRYAEILGGAVLLGIGFKILHESGVFG
>Mature_190_residues
METPALLALAVALAMDALAVAVATGCRLRTVSARQTLRLAWHFGLFQAAMPIAGWFMGQGIRSFVDAWAHWIAFGLLAFI
GLKMLKEAFEHDDAECGMADPTRGTSLIMLSVATSIDALAVGVTLSMLGLSIWMPAAVIGLVCLGLTAAGVQLGRVLAAS
SALSRYAEILGGAVLLGIGFKILHESGVFG

Specific function: Unknown

COG id: COG1971

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0059 family

Homologues:

Organism=Escherichia coli, GI87081981, Length=186, Percent_Identity=38.7096774193548, Blast_Score=107, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2978_DESDG (Q30X24)

Other databases:

- EMBL:   CP000112
- RefSeq:   YP_389467.1
- STRING:   Q30X24
- GeneID:   3757983
- GenomeReviews:   CP000112_GR
- KEGG:   dde:Dde_2978
- NMPDR:   fig|207559.3.peg.3033
- eggNOG:   COG1971
- HOGENOM:   HBG709685
- OMA:   MPLIGYL
- ProtClustDB:   CLSK926790
- BioCyc:   DDES207559:DDE_2978-MONOMER
- HAMAP:   MF_01521
- InterPro:   IPR003810
- InterPro:   IPR022929

Pfam domain/function: PF02659 DUF204

EC number: NA

Molecular weight: Translated: 19802; Mature: 19802

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10172474)-; HASH(0x1428d874)-; HASH(0x14392294)-; HASH(0x143a520c)-; HASH(0x14060edc)-; HASH(0x13b70100)-;

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METPALLALAVALAMDALAVAVATGCRLRTVSARQTLRLAWHFGLFQAAMPIAGWFMGQG
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRSFVDAWAHWIAFGLLAFIGLKMLKEAFEHDDAECGMADPTRGTSLIMLSVATSIDALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHH
VGVTLSMLGLSIWMPAAVIGLVCLGLTAAGVQLGRVLAASSALSRYAEILGGAVLLGIGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KILHESGVFG
HHHHHCCCCH
>Mature Secondary Structure
METPALLALAVALAMDALAVAVATGCRLRTVSARQTLRLAWHFGLFQAAMPIAGWFMGQG
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRSFVDAWAHWIAFGLLAFIGLKMLKEAFEHDDAECGMADPTRGTSLIMLSVATSIDALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHH
VGVTLSMLGLSIWMPAAVIGLVCLGLTAAGVQLGRVLAASSALSRYAEILGGAVLLGIGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KILHESGVFG
HHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA