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The map label for this gene is yfiV [H]

Identifier: 78358017

GI number: 78358017

Start: 2959446

End: 2959862

Strand: Direct

Name: yfiV [H]

Synonym: Dde_2977

Alternate gene names: 78358017

Gene position: 2959446-2959862 (Clockwise)

Preceding gene: 78358016

Following gene: 78358018

Centisome position: 79.34

GC content: 54.92

Gene sequence:

>417_bases
ATGACTGCTTCTTCAGACCTCAATCACGCCATTGTCGAATTTTATGAAAAGCTTTCTTCATGGGAGCACTGCGTTGTGCG
GGACAAGGGACTTACCCTGCCCCAGATGCACACGCTGGAAATTCTGGGCATACACCGCGCCATGCGCATGAAAGAACTGG
CATCAAAAATGGGGGTGACCACAGGCACACTGACCGTGCTGGTGGACAGGCTGGAAGAGAGAGGTCTGGTGCAGCGCAGC
CCGCACATGACGGACCGCCGGTCCATCATGGTGGAACTGACCGACAGCGGCCGTACCGAATTTGAAGAACACGACCGCCT
GCACATACGGCTGACAGAAGAAATCTGCGCCGGATTGTCCGATGAAGACAAAGACGCTCTGCTGCGCTGTCTGCTTTCCA
TGAACAGGATGTTCTGA

Upstream 100 bases:

>100_bases
GTGCGCTGACGGTATTTTTCGGCGTATTCAGCTATTTTCATTAACATTCAACACAGAAACCGCGTTGTCACCGGCATTGC
GGCATATCTGGCAGGGCATA

Downstream 100 bases:

>100_bases
TGGAAACACCGGCACTGCTTGCACTGGCTGTGGCGCTGGCCATGGATGCACTGGCGGTGGCTGTGGCCACCGGATGCAGA
CTACGCACGGTATCGGCCCG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MTASSDLNHAIVEFYEKLSSWEHCVVRDKGLTLPQMHTLEILGIHRAMRMKELASKMGVTTGTLTVLVDRLEERGLVQRS
PHMTDRRSIMVELTDSGRTEFEEHDRLHIRLTEEICAGLSDEDKDALLRCLLSMNRMF

Sequences:

>Translated_138_residues
MTASSDLNHAIVEFYEKLSSWEHCVVRDKGLTLPQMHTLEILGIHRAMRMKELASKMGVTTGTLTVLVDRLEERGLVQRS
PHMTDRRSIMVELTDSGRTEFEEHDRLHIRLTEEICAGLSDEDKDALLRCLLSMNRMF
>Mature_137_residues
TASSDLNHAIVEFYEKLSSWEHCVVRDKGLTLPQMHTLEILGIHRAMRMKELASKMGVTTGTLTVLVDRLEERGLVQRSP
HMTDRRSIMVELTDSGRTEFEEHDRLHIRLTEEICAGLSDEDKDALLRCLLSMNRMF

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 15884; Mature: 15752

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASSDLNHAIVEFYEKLSSWEHCVVRDKGLTLPQMHTLEILGIHRAMRMKELASKMGVT
CCCCCCHHHHHHHHHHHHCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
TGTLTVLVDRLEERGLVQRSPHMTDRRSIMVELTDSGRTEFEEHDRLHIRLTEEICAGLS
HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEHHHHHCCCC
DEDKDALLRCLLSMNRMF
CCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TASSDLNHAIVEFYEKLSSWEHCVVRDKGLTLPQMHTLEILGIHRAMRMKELASKMGVT
CCCCCHHHHHHHHHHHHCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
TGTLTVLVDRLEERGLVQRSPHMTDRRSIMVELTDSGRTEFEEHDRLHIRLTEEICAGLS
HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEHHHHHCCCC
DEDKDALLRCLLSMNRMF
CCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]