| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is mtaD [H]
Identifier: 78358003
GI number: 78358003
Start: 2945701
End: 2947107
Strand: Direct
Name: mtaD [H]
Synonym: Dde_2963
Alternate gene names: 78358003
Gene position: 2945701-2947107 (Clockwise)
Preceding gene: 78358001
Following gene: 78358004
Centisome position: 78.97
GC content: 62.69
Gene sequence:
>1407_bases ATGCCGCAGTGCACGGCTCTGTTTTTCCGCGTTCTGCTGCCCCGCGCTTTACGTCTTTGCCCGCACAGTGTACAAGCTTC GCGCAACAGCGTACTCTGCTGCGCAGCACATGCCGTCACGATCATCCGCGTCCGGCCTGTCCCTGTCTGCAATCTACGGA TGAACAAGGCTTTTCCGGTGATGAAACCTACCGCTTTCCGGGCGAAACGCATCATAACCATGACCGAAAAGCGGCTGGCT GCCGCTGCCGCCACACCGTTTTCATCCGGCATATCTCCGCAATATCAGCAATTTTCAGGTTTTGCTTCAACACCCCGTCC CGTTTTCGAAGACGGGGTTATTATTGTGCGCGACAACACCATTCTGTGTGTGGAACCCCACAGCCGGTTTGTCCGCCGCG CGGGCATACCGCTGCACGATCTGGGGCCGGTTACACTGGTTCCCGGCCTGATAAACTGCCACAATCATCTGGAACTGAGT CATCTGCACGGCAAAACCCTGCTGGGAGAAGGATTCACCAGCTGGGTCGGGCACATGATCCGGCAGGATATGACACCGCA GGAAGAGGCCGTGCTCAATGCCACGGCATTCATGCACCGCACGGGCACAGTACACGTGGCAGACATCACAAGCCGCGCTC CGGCGCTGGTGGCACGCTGCGCGCAGCAGGCCGGTCTTTCGTACCACCTGCTGCTTGAATGGTTCGGGCATATGCCGCCC GCGTCCGGCGCTCCTGCCCTGCCTGATGCGGCAGCACAGCTGCCTCAGGCCGTGCTGCAGGCATGCTGCGCTCCTGCCGG ACACGCCCTGTATTCCACCCATCCCGAACGGCTGCGGCAGGCAAAAGACTGGTGCCGCGCGCACCACATGCCTTTTTCCA TGCATCTGGCAGAGCATCAGGGCGAAGTGGAAATGCTGGCTACCGGTACCGGTGCATTCAGGGATCTGCTTTCCGTACGG GTGCTGCCCGCAGACTACACTCCGCCGCGCTGTTCGCCTGTCAGCCATGCCCACGCGCTGGGGCTGCTGGGTCCGGGTAC GCTGGCCGTCCACTGCGTGCACTGCGACCGGCACGACATCCAGACCCTTGCCCGCAGCGGCACGGCCGTTTGTCTGTGCC CGCGCAGCAACAGCGCCATCGGCTCGGGTGATGCCCCTGTAAACAGTTTTATACAGGCCGGACTGCTGCTGTGTCTGGGC ACGGACAGTCTGGCCTCGAACCATGACCTGAACCTGTGGAATGAGGCCCGCGCGCTGCGCGACCGGCACGGAGCAGCCCC CGATAATCTGCTGTTCATGCTCACAGCCGGCGGCGCTCAGGCTCTGGGCCTGAACAGACTGGGAGCGCTTGCCCCGGGCA TGGCCGCCGGATGGGCCGTAGTGCCCGACGACCTCTGCCCCGCCTGA
Upstream 100 bases:
>100_bases CAGCGGACATGATGAAACACACGCATACTCCGGCGGCAAAAAATAATCTGCAGCCACAGGCATCCGGCAACGGCAAAACC ATGCGGCATGACACACAAAC
Downstream 100 bases:
>100_bases GCAGGCACGAACCGGGACATGTATCCCGCAATGAGACCGGAAGACAATGCAAGACCAAGAACGATTCATCTGGCCCCACA AAGATCTGCTGGACGTCACG
Product: amidohydrolase family protein
Products: NA
Alternate protein names: MTA/SAH deaminase [H]
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MPQCTALFFRVLLPRALRLCPHSVQASRNSVLCCAAHAVTIIRVRPVPVCNLRMNKAFPVMKPTAFRAKRIITMTEKRLA AAAATPFSSGISPQYQQFSGFASTPRPVFEDGVIIVRDNTILCVEPHSRFVRRAGIPLHDLGPVTLVPGLINCHNHLELS HLHGKTLLGEGFTSWVGHMIRQDMTPQEEAVLNATAFMHRTGTVHVADITSRAPALVARCAQQAGLSYHLLLEWFGHMPP ASGAPALPDAAAQLPQAVLQACCAPAGHALYSTHPERLRQAKDWCRAHHMPFSMHLAEHQGEVEMLATGTGAFRDLLSVR VLPADYTPPRCSPVSHAHALGLLGPGTLAVHCVHCDRHDIQTLARSGTAVCLCPRSNSAIGSGDAPVNSFIQAGLLLCLG TDSLASNHDLNLWNEARALRDRHGAAPDNLLFMLTAGGAQALGLNRLGALAPGMAAGWAVVPDDLCPA
Sequences:
>Translated_468_residues MPQCTALFFRVLLPRALRLCPHSVQASRNSVLCCAAHAVTIIRVRPVPVCNLRMNKAFPVMKPTAFRAKRIITMTEKRLA AAAATPFSSGISPQYQQFSGFASTPRPVFEDGVIIVRDNTILCVEPHSRFVRRAGIPLHDLGPVTLVPGLINCHNHLELS HLHGKTLLGEGFTSWVGHMIRQDMTPQEEAVLNATAFMHRTGTVHVADITSRAPALVARCAQQAGLSYHLLLEWFGHMPP ASGAPALPDAAAQLPQAVLQACCAPAGHALYSTHPERLRQAKDWCRAHHMPFSMHLAEHQGEVEMLATGTGAFRDLLSVR VLPADYTPPRCSPVSHAHALGLLGPGTLAVHCVHCDRHDIQTLARSGTAVCLCPRSNSAIGSGDAPVNSFIQAGLLLCLG TDSLASNHDLNLWNEARALRDRHGAAPDNLLFMLTAGGAQALGLNRLGALAPGMAAGWAVVPDDLCPA >Mature_467_residues PQCTALFFRVLLPRALRLCPHSVQASRNSVLCCAAHAVTIIRVRPVPVCNLRMNKAFPVMKPTAFRAKRIITMTEKRLAA AAATPFSSGISPQYQQFSGFASTPRPVFEDGVIIVRDNTILCVEPHSRFVRRAGIPLHDLGPVTLVPGLINCHNHLELSH LHGKTLLGEGFTSWVGHMIRQDMTPQEEAVLNATAFMHRTGTVHVADITSRAPALVARCAQQAGLSYHLLLEWFGHMPPA SGAPALPDAAAQLPQAVLQACCAPAGHALYSTHPERLRQAKDWCRAHHMPFSMHLAEHQGEVEMLATGTGAFRDLLSVRV LPADYTPPRCSPVSHAHALGLLGPGTLAVHCVHCDRHDIQTLARSGTAVCLCPRSNSAIGSGDAPVNSFIQAGLLLCLGT DSLASNHDLNLWNEARALRDRHGAAPDNLLFMLTAGGAQALGLNRLGALAPGMAAGWAVVPDDLCPA
Specific function: Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MTA/SAH deaminase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.28 [H]
Molecular weight: Translated: 50205; Mature: 50074
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQCTALFFRVLLPRALRLCPHSVQASRNSVLCCAAHAVTIIRVRPVPVCNLRMNKAFPV CCHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEECEEEEEEECCCCEECEECCCCCCC MKPTAFRAKRIITMTEKRLAAAAATPFSSGISPQYQQFSGFASTPRPVFEDGVIIVRDNT CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHCCEEEEECCE ILCVEPHSRFVRRAGIPLHDLGPVTLVPGLINCHNHLELSHLHGKTLLGEGFTSWVGHMI EEEECCHHHHHHHCCCCCCCCCCHHHHCHHHHCCCCEEEEHHCCCHHHCCCHHHHHHHHH RQDMTPQEEAVLNATAFMHRTGTVHVADITSRAPALVARCAQQAGLSYHLLLEWFGHMPP HHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCC ASGAPALPDAAAQLPQAVLQACCAPAGHALYSTHPERLRQAKDWCRAHHMPFSMHLAEHQ CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHCCCEEEEHHHCC GEVEMLATGTGAFRDLLSVRVLPADYTPPRCSPVSHAHALGLLGPGTLAVHCVHCDRHDI CCEEEEEECCHHHHHHHHEEEECCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEECCHHHH QTLARSGTAVCLCPRSNSAIGSGDAPVNSFIQAGLLLCLGTDSLASNHDLNLWNEARALR HHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHCEEEEECCCCCCCCCCCCHHHHHHHHH DRHGAAPDNLLFMLTAGGAQALGLNRLGALAPGMAAGWAVVPDDLCPA HHCCCCCCCEEEEEECCCCHHCCHHHHHHCCCCCCCCCEECCHHCCCC >Mature Secondary Structure PQCTALFFRVLLPRALRLCPHSVQASRNSVLCCAAHAVTIIRVRPVPVCNLRMNKAFPV CHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEECEEEEEEECCCCEECEECCCCCCC MKPTAFRAKRIITMTEKRLAAAAATPFSSGISPQYQQFSGFASTPRPVFEDGVIIVRDNT CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCHHHCCEEEEECCE ILCVEPHSRFVRRAGIPLHDLGPVTLVPGLINCHNHLELSHLHGKTLLGEGFTSWVGHMI EEEECCHHHHHHHCCCCCCCCCCHHHHCHHHHCCCCEEEEHHCCCHHHCCCHHHHHHHHH RQDMTPQEEAVLNATAFMHRTGTVHVADITSRAPALVARCAQQAGLSYHLLLEWFGHMPP HHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCC ASGAPALPDAAAQLPQAVLQACCAPAGHALYSTHPERLRQAKDWCRAHHMPFSMHLAEHQ CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHCCCEEEEHHHCC GEVEMLATGTGAFRDLLSVRVLPADYTPPRCSPVSHAHALGLLGPGTLAVHCVHCDRHDI CCEEEEEECCHHHHHHHHEEEECCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEECCHHHH QTLARSGTAVCLCPRSNSAIGSGDAPVNSFIQAGLLLCLGTDSLASNHDLNLWNEARALR HHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHCEEEEECCCCCCCCCCCCHHHHHHHHH DRHGAAPDNLLFMLTAGGAQALGLNRLGALAPGMAAGWAVVPDDLCPA HHCCCCCCCEEEEEECCCCHHCCHHHHHHCCCCCCCCCEECCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA