| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358002
Identifier: 78358002
GI number: 78358002
Start: 2944693
End: 2945514
Strand: Reverse
Name: 78358002
Synonym: Dde_2962
Alternate gene names: NA
Gene position: 2945514-2944693 (Counterclockwise)
Preceding gene: 78358008
Following gene: 78357994
Centisome position: 78.96
GC content: 58.15
Gene sequence:
>822_bases ATGCGAAAGGAACTGTGCATTATACACGCCAACTGTCAGGGCGATCCGCTGGCGCGTCTGCTGTTGTCCTGCGACGCCTT CGCCCGCAGGTTCGAAGTGCGCAAATATACAAATTTTCAGCGGGAGCAGATTCCGGACCGCGAACTGGAATCCTGCCGGC TGTTTCTTTTTCAGCATCTGGGAGAAAAGTGGGCGGAGCAGGCTTCGGCGCATCTGCTGCACCGGCTGGGACCCGCGGCC GAGGTGCTGCGTCTGCCCAACATGCTTTTCAAGGGATACTGGCCGTTGTGGACCAGCCGCAGTCCCAGCGAATTCGGCGA TGTATACCTTGATCATCTGATTGATATGGGGCTGGAGAAAAAAGAGATTCTGTACGTGTATCTGCACACGGACCTGACAG CGAAGTACGATCTGGACGCCATGCTGCGCGAATCGCTGGCCGTGGAACGTGCCAAGGAAGAGGAAACCGTGGTGCGTACC GTTGATCTTGTGGAGTCGTTATGGCGTGGGGAGCTGCTGTTCAACACCATAAACCATCCGGGCCGCAGGCTGCTGCTGCA TGTGGCCGGAGGCGTGCTGCGTGCCCTAGGTTTTTCGCAGCTTTCAGCTGACGTATGCGCCGGATTTGCCGACCCCTATC CCGAATTCATCCTGCCGGTGCATCCTCAGGTGGCGGCGTTTCACGGGCTGGCTTTCGGGGGAGAAGACTGGCAGTACCCC GTCTTCGGCAGGCAGAAAACATTTGCCCGGTATGCCGAGCATTATGTGGACTGCCGTCTGCTGGGGCTGGAAAGCCTGAG CGCGTATCTGCATCTGGTGTGA
Upstream 100 bases:
>100_bases CATCATGTCCGCTGTGCAGGCGTCTCCGGACCGGCGCAGGTGCATGGCGCACGTGGTGGCGGGGGTTGCCGTAAGCGCCG CTGTGCCCTAGATACCCTGT
Downstream 100 bases:
>100_bases GCCCCGTTGTATAGTTGCCCCGTTGCCCCGTTGCCCCGTTGTACCGTTGTGCCGTTGCACCATGCGGCGGCAGCGTCGCG TCTAGGGCACATCCACCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MRKELCIIHANCQGDPLARLLLSCDAFARRFEVRKYTNFQREQIPDRELESCRLFLFQHLGEKWAEQASAHLLHRLGPAA EVLRLPNMLFKGYWPLWTSRSPSEFGDVYLDHLIDMGLEKKEILYVYLHTDLTAKYDLDAMLRESLAVERAKEEETVVRT VDLVESLWRGELLFNTINHPGRRLLLHVAGGVLRALGFSQLSADVCAGFADPYPEFILPVHPQVAAFHGLAFGGEDWQYP VFGRQKTFARYAEHYVDCRLLGLESLSAYLHLV
Sequences:
>Translated_273_residues MRKELCIIHANCQGDPLARLLLSCDAFARRFEVRKYTNFQREQIPDRELESCRLFLFQHLGEKWAEQASAHLLHRLGPAA EVLRLPNMLFKGYWPLWTSRSPSEFGDVYLDHLIDMGLEKKEILYVYLHTDLTAKYDLDAMLRESLAVERAKEEETVVRT VDLVESLWRGELLFNTINHPGRRLLLHVAGGVLRALGFSQLSADVCAGFADPYPEFILPVHPQVAAFHGLAFGGEDWQYP VFGRQKTFARYAEHYVDCRLLGLESLSAYLHLV >Mature_273_residues MRKELCIIHANCQGDPLARLLLSCDAFARRFEVRKYTNFQREQIPDRELESCRLFLFQHLGEKWAEQASAHLLHRLGPAA EVLRLPNMLFKGYWPLWTSRSPSEFGDVYLDHLIDMGLEKKEILYVYLHTDLTAKYDLDAMLRESLAVERAKEEETVVRT VDLVESLWRGELLFNTINHPGRRLLLHVAGGVLRALGFSQLSADVCAGFADPYPEFILPVHPQVAAFHGLAFGGEDWQYP VFGRQKTFARYAEHYVDCRLLGLESLSAYLHLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31388; Mature: 31388
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKELCIIHANCQGDPLARLLLSCDAFARRFEVRKYTNFQREQIPDRELESCRLFLFQHL CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHH GEKWAEQASAHLLHRLGPAAEVLRLPNMLFKGYWPLWTSRSPSEFGDVYLDHLIDMGLEK HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC KEILYVYLHTDLTAKYDLDAMLRESLAVERAKEEETVVRTVDLVESLWRGELLFNTINHP CEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC GRRLLLHVAGGVLRALGFSQLSADVCAGFADPYPEFILPVHPQVAAFHGLAFGGEDWQYP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHEEECCCCCCCC VFGRQKTFARYAEHYVDCRLLGLESLSAYLHLV CCCCHHHHHHHHHHHHHHHEECHHHHHHHHHCC >Mature Secondary Structure MRKELCIIHANCQGDPLARLLLSCDAFARRFEVRKYTNFQREQIPDRELESCRLFLFQHL CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHH GEKWAEQASAHLLHRLGPAAEVLRLPNMLFKGYWPLWTSRSPSEFGDVYLDHLIDMGLEK HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCC KEILYVYLHTDLTAKYDLDAMLRESLAVERAKEEETVVRTVDLVESLWRGELLFNTINHP CEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC GRRLLLHVAGGVLRALGFSQLSADVCAGFADPYPEFILPVHPQVAAFHGLAFGGEDWQYP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHEEECCCCCCCC VFGRQKTFARYAEHYVDCRLLGLESLSAYLHLV CCCCHHHHHHHHHHHHHHHEECHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA