| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357935
Identifier: 78357935
GI number: 78357935
Start: 2883441
End: 2884331
Strand: Reverse
Name: 78357935
Synonym: Dde_2894
Alternate gene names: NA
Gene position: 2884331-2883441 (Counterclockwise)
Preceding gene: 304570591
Following gene: 78357934
Centisome position: 77.32
GC content: 39.06
Gene sequence:
>891_bases TTGGCAAACACAAAGGAGCTAGGTCCTTTGCGAATATTGATTTCCAGACTGTTAAAAAAAGCAGGCGAATTGTGTTTTAC GGCATCTGATCTCACTATTTCTAAAGAGCAGGCTAAGCTTATAACTCGGGGTGCTCCACGCTTTCCCTACCACACCCCAC ACAATATGTTGTTTTGGCTTGATGAGTCTCAATATGTAGATAAGTGTATCATTCAACATGGAAAGTATGAGTCCGCTTCT ACAAATTTAGTTCAGCAGTTTGTTAAAGAAGGACAAACTGTTTTGGATATTGGTGGTAACATTGGCTACTACACGGTGAT GTTTTCAAAAATTGTAGGAAGATCAGGGAAAGTTATCACTTTTGAACCTACAGCCCATTATCGTTCGATTTTAGAAAAGA ATGTTCAGGAAAACCAGATTAACAATGTCCTCATTCGTCCAGAAGGGCTTTCAGACAAAGCTGAAAAATTAACTATATCG ATCGGAAGCTCTACAGCTACGCTACATGCCCCTGAAGGGCAGCAAATAGATTCATATGAAGCGATCCAACTTGCGCGTCT TGATGACCTCGTAGAGCAACTTGATATTACTAAACTTGACTTTATCAAGATCGACGTAGATGGGCACGAGCCTTCAGTAT TACGAGGAGCACAGCAGACTATTAAAAAGTTTAAGCCCCTCATACTGCTCGAGGTTTCCCATTTACATTATTTAGAAGGT AATGTGTTTGCATGGGACTTTTACGACTACCTATCATCTTTAAATTATTATATATATGATGAGCATGAGATGTGTCGTAT TACAAGGCGTAGTGATTTCTTAATTCGATGCGCCAATTTTGATAGAAGTTGTAATATCTTACTATCACCGACCCTTTTGA ATGAACACTAA
Upstream 100 bases:
>100_bases AGAATGGAATACCTTTCTCTTTAAATGTATCGCACAGTGAAAACTGGGGAGGCCCTTATCCAAATGATACTTTTAGAGCA AAGTTAACACCCCGATTCCC
Downstream 100 bases:
>100_bases GGACATGTAATGCAAAAAATTAAATATTTTAAAGTTCCTGACCGATTGCAACGGCTGCTGGGTAATACGCCGCTTTTGGC ACGCCAAGTGTTGCCCTTAA
Product: methyltransferase FkbM
Products: NA
Alternate protein names: Methyltransferase FkbM Family; Methyltransferase; Methyltransferase FkbM; SAM-Dependent Methyltransferase; Lipopolysaccharide Biosynthesis Protein; Cytoplasmic Protein; Methyltransferase Fkbm Family Domain Protein; SAM Dependent Methyltransferase; Lipolysaccharide Tri-O-Methyl-Fucosylation Protein; Methyltransferase Fkbm Family; Metyltransferase; Ata11 Protein
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MANTKELGPLRILISRLLKKAGELCFTASDLTISKEQAKLITRGAPRFPYHTPHNMLFWLDESQYVDKCIIQHGKYESAS TNLVQQFVKEGQTVLDIGGNIGYYTVMFSKIVGRSGKVITFEPTAHYRSILEKNVQENQINNVLIRPEGLSDKAEKLTIS IGSSTATLHAPEGQQIDSYEAIQLARLDDLVEQLDITKLDFIKIDVDGHEPSVLRGAQQTIKKFKPLILLEVSHLHYLEG NVFAWDFYDYLSSLNYYIYDEHEMCRITRRSDFLIRCANFDRSCNILLSPTLLNEH
Sequences:
>Translated_296_residues MANTKELGPLRILISRLLKKAGELCFTASDLTISKEQAKLITRGAPRFPYHTPHNMLFWLDESQYVDKCIIQHGKYESAS TNLVQQFVKEGQTVLDIGGNIGYYTVMFSKIVGRSGKVITFEPTAHYRSILEKNVQENQINNVLIRPEGLSDKAEKLTIS IGSSTATLHAPEGQQIDSYEAIQLARLDDLVEQLDITKLDFIKIDVDGHEPSVLRGAQQTIKKFKPLILLEVSHLHYLEG NVFAWDFYDYLSSLNYYIYDEHEMCRITRRSDFLIRCANFDRSCNILLSPTLLNEH >Mature_295_residues ANTKELGPLRILISRLLKKAGELCFTASDLTISKEQAKLITRGAPRFPYHTPHNMLFWLDESQYVDKCIIQHGKYESAST NLVQQFVKEGQTVLDIGGNIGYYTVMFSKIVGRSGKVITFEPTAHYRSILEKNVQENQINNVLIRPEGLSDKAEKLTISI GSSTATLHAPEGQQIDSYEAIQLARLDDLVEQLDITKLDFIKIDVDGHEPSVLRGAQQTIKKFKPLILLEVSHLHYLEGN VFAWDFYDYLSSLNYYIYDEHEMCRITRRSDFLIRCANFDRSCNILLSPTLLNEH
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33788; Mature: 33657
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANTKELGPLRILISRLLKKAGELCFTASDLTISKEQAKLITRGAPRFPYHTPHNMLFWL CCCCCCCCHHHHHHHHHHHHHCCEEEEECCCEECHHHHHHHHCCCCCCCCCCCCCEEEEE DESQYVDKCIIQHGKYESASTNLVQQFVKEGQTVLDIGGNIGYYTVMFSKIVGRSGKVIT CCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCEEE FEPTAHYRSILEKNVQENQINNVLIRPEGLSDKAEKLTISIGSSTATLHAPEGQQIDSYE ECCCHHHHHHHHCCCHHHCCCEEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCHH AIQLARLDDLVEQLDITKLDFIKIDVDGHEPSVLRGAQQTIKKFKPLILLEVSHLHYLEG HHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCEEEECC NVFAWDFYDYLSSLNYYIYDEHEMCRITRRSDFLIRCANFDRSCNILLSPTLLNEH CEEEEEHHHHHHCCCEEEECCHHHEEEECCCCEEEEEECCCCCCEEEECCEECCCC >Mature Secondary Structure ANTKELGPLRILISRLLKKAGELCFTASDLTISKEQAKLITRGAPRFPYHTPHNMLFWL CCCCCCCHHHHHHHHHHHHHCCEEEEECCCEECHHHHHHHHCCCCCCCCCCCCCEEEEE DESQYVDKCIIQHGKYESASTNLVQQFVKEGQTVLDIGGNIGYYTVMFSKIVGRSGKVIT CCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCEEE FEPTAHYRSILEKNVQENQINNVLIRPEGLSDKAEKLTISIGSSTATLHAPEGQQIDSYE ECCCHHHHHHHHCCCHHHCCCEEEECCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCHH AIQLARLDDLVEQLDITKLDFIKIDVDGHEPSVLRGAQQTIKKFKPLILLEVSHLHYLEG HHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCEEEECC NVFAWDFYDYLSSLNYYIYDEHEMCRITRRSDFLIRCANFDRSCNILLSPTLLNEH CEEEEEHHHHHHCCCEEEECCHHHEEEECCCCEEEEEECCCCCCEEEECCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA