| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is yijE [C]
Identifier: 78357897
GI number: 78357897
Start: 2844104
End: 2844970
Strand: Direct
Name: yijE [C]
Synonym: Dde_2856
Alternate gene names: 78357897
Gene position: 2844104-2844970 (Clockwise)
Preceding gene: 78357893
Following gene: 78357900
Centisome position: 76.24
GC content: 62.51
Gene sequence:
>867_bases ATGCAGTCTGCACTGGGATATGTATATGTTGCTCTGGCCGCGCTCATGTGGGCCTTTATCGGTCCGCTGGCCCAGATATG CTTTAACGAAGGCACCACCCCCATGGAGGTGGCCTTCTGGCGGTGCCTTACCGGTGCGCTGTTTTTCATGGCGCATGCTG CGGTGACCGGCCGGTGGCGCGCCGGGCTGCGTGATGCCCCCGTGTTCACGGCGTTCGGTCTGGTGGGAATAGCGCTGTTT TTCGGCTCGTATCAGATTTCCGTGCGCGAAGGCGGGGCCGCGCTGGCATCCATAATGCTCTACACCGCACCCGCATGGGT GGCGCTGCTGGCCCGTATCTGCTTTGCCGAGGCACTTACGCCGCACAGGCTGGCTGCGCTGGCGCTGGCCATGAGCGGCA CCATGCTGGTCAGTCTGTCCGGCGGCGCAGGCAGCGGGTCGGTCACGGCAGGCGTGCTGTGGGGACTTGTGGCCGGTTTC AGCTATTCGCTGCACTACGTTTTCGGCAAAAACTACCTGCACCGTTACTCGTCAGTCACTCTGTATTCCTACTGCCTGCC TGCGGGGGCACTGGCTCTGCTGCCGTGGGTCACTTTTTCGCAGCACAGTGCGCTGGGCTGGTTCGCGCTGATAATGGAAG GCTTTCTGTGCACATGGCTGGCATATCTTGCCTACTGCGCAGGGCTCAAACGGCTGGCCGCGTCGCGGGCGGCCATAGTG GCCAATCTGGAACCGGTGGCCGCTGCCGTGCTGGCGTACTGGTGGTGGAACGAGATTCTGCCTCCTGTGGGACTGGCGGG CAGCGCACTTGTTCTTTCCGGAGTATTTGTGGTGGTGCGCGAAAAAAACACCGCGGCCACGGCCTGA
Upstream 100 bases:
>100_bases CTGCTGGAGGATTGTTTTGTGTCTTTTAACACTGTATTGCAGAACAATGAAGTATGAAAACAGGTTGCTCCGCCGCCGGC AACCACAGGGGAGCCCCGCC
Downstream 100 bases:
>100_bases GCCCCTGACGTCTGCAGAGCATTGCGGTCTGCTGTCCTCCGGTTTCTCCGGCAGCCGGCACCCGCCGCCACAAAAACAAA AAGCCGGAGCGTATTGCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MQSALGYVYVALAALMWAFIGPLAQICFNEGTTPMEVAFWRCLTGALFFMAHAAVTGRWRAGLRDAPVFTAFGLVGIALF FGSYQISVREGGAALASIMLYTAPAWVALLARICFAEALTPHRLAALALAMSGTMLVSLSGGAGSGSVTAGVLWGLVAGF SYSLHYVFGKNYLHRYSSVTLYSYCLPAGALALLPWVTFSQHSALGWFALIMEGFLCTWLAYLAYCAGLKRLAASRAAIV ANLEPVAAAVLAYWWWNEILPPVGLAGSALVLSGVFVVVREKNTAATA
Sequences:
>Translated_288_residues MQSALGYVYVALAALMWAFIGPLAQICFNEGTTPMEVAFWRCLTGALFFMAHAAVTGRWRAGLRDAPVFTAFGLVGIALF FGSYQISVREGGAALASIMLYTAPAWVALLARICFAEALTPHRLAALALAMSGTMLVSLSGGAGSGSVTAGVLWGLVAGF SYSLHYVFGKNYLHRYSSVTLYSYCLPAGALALLPWVTFSQHSALGWFALIMEGFLCTWLAYLAYCAGLKRLAASRAAIV ANLEPVAAAVLAYWWWNEILPPVGLAGSALVLSGVFVVVREKNTAATA >Mature_288_residues MQSALGYVYVALAALMWAFIGPLAQICFNEGTTPMEVAFWRCLTGALFFMAHAAVTGRWRAGLRDAPVFTAFGLVGIALF FGSYQISVREGGAALASIMLYTAPAWVALLARICFAEALTPHRLAALALAMSGTMLVSLSGGAGSGSVTAGVLWGLVAGF SYSLHYVFGKNYLHRYSSVTLYSYCLPAGALALLPWVTFSQHSALGWFALIMEGFLCTWLAYLAYCAGLKRLAASRAAIV ANLEPVAAAVLAYWWWNEILPPVGLAGSALVLSGVFVVVREKNTAATA
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004779 - InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 30616; Mature: 30616
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSALGYVYVALAALMWAFIGPLAQICFNEGTTPMEVAFWRCLTGALFFMAHAAVTGRWR CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLRDAPVFTAFGLVGIALFFGSYQISVREGGAALASIMLYTAPAWVALLARICFAEALT CCCCCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PHRLAALALAMSGTMLVSLSGGAGSGSVTAGVLWGLVAGFSYSLHYVFGKNYLHRYSSVT HHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYSYCLPAGALALLPWVTFSQHSALGWFALIMEGFLCTWLAYLAYCAGLKRLAASRAAIV HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANLEPVAAAVLAYWWWNEILPPVGLAGSALVLSGVFVVVREKNTAATA CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCEEEEEEECCCCCCC >Mature Secondary Structure MQSALGYVYVALAALMWAFIGPLAQICFNEGTTPMEVAFWRCLTGALFFMAHAAVTGRWR CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLRDAPVFTAFGLVGIALFFGSYQISVREGGAALASIMLYTAPAWVALLARICFAEALT CCCCCCHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PHRLAALALAMSGTMLVSLSGGAGSGSVTAGVLWGLVAGFSYSLHYVFGKNYLHRYSSVT HHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYSYCLPAGALALLPWVTFSQHSALGWFALIMEGFLCTWLAYLAYCAGLKRLAASRAAIV HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ANLEPVAAAVLAYWWWNEILPPVGLAGSALVLSGVFVVVREKNTAATA CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]