| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is purN [H]
Identifier: 78357876
GI number: 78357876
Start: 2822067
End: 2822741
Strand: Reverse
Name: purN [H]
Synonym: Dde_2835
Alternate gene names: 78357876
Gene position: 2822741-2822067 (Counterclockwise)
Preceding gene: 78357877
Following gene: 78357875
Centisome position: 75.67
GC content: 63.26
Gene sequence:
>675_bases ATGCCGCTGCAACTGGCGGTGCTGGCATCGGGCAACGGGTCAAACCTGCAGGCCGTGCTGGACCGCGCTGCACAGGGTGT GCTGGATGTAGAGGTGCGCCTTGTGGCGTCCAACAAGGAAGACGCCTGCGCCCTTGATCGGGCGCGGCGTGCAGGCATTC CCGTGTGGGCGCGCAATCACGGCAGTTTTGCCGGCAGAGAGGAATTTGACGCGGCGCTGGTGGACGCCATACGGGCCAGC GGGGCCGACACCATCATGCTGGCGGGATACATGCGTCTGCTTACACCGTATTTTCTCAATGCCTTTCCGGGCAGGGTGCT CAATGTGCATCCGGCCCTGCTGCCCAGCTTTCCCGGAGTAAGGGGAGTAGCCGACGCCGTGGAGTACGGTGTGCGTGTGG CAGGGTGCACAGTGCATTTTGTTGATGAAATAATGGACCACGGACCGGTGATCATTCAGGCGGCTGTTCCCGTGTCTGCC TGCGATTCCCGCGATGACGTGCTGCAGCGGGTGCATGCGGCAGAGCACCGCATTTATCCTCAGGCATTGCAGTGGCTGGC CGAAGGCCGGCTGTCGCTGCAGGGCCGGGTGGTGCATCTGGCACCGTCACGGCGTCCTGCGGCCGGTGCAGCGGCGGATA TGCTGGTTTCGCCCGCGCTGGAACAAGGTTTTTAA
Upstream 100 bases:
>100_bases GGTGATCCCGTGCATGTGTTGTGATACGAGATGATGTTGTTACGGCTGCCCGTCATGTGCGGCGTGCAGTGTCTTTGATT ATAGCAGGACAGGAGGCATT
Downstream 100 bases:
>100_bases CTCTTCCGGGCAGAGTGGCTGCCGCGGTGTGCCGTGGCGGCATGTGCACCCGTGCGGCCGCTGCGGCCGAGGTCCGGTGC CGTTTGCAGCGGTGCATGGT
Product: phosphoribosylglycinamide formyltransferase
Products: NA
Alternate protein names: 5'-phosphoribosylglycinamide transformylase; GAR transformylase; GART [H]
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MPLQLAVLASGNGSNLQAVLDRAAQGVLDVEVRLVASNKEDACALDRARRAGIPVWARNHGSFAGREEFDAALVDAIRAS GADTIMLAGYMRLLTPYFLNAFPGRVLNVHPALLPSFPGVRGVADAVEYGVRVAGCTVHFVDEIMDHGPVIIQAAVPVSA CDSRDDVLQRVHAAEHRIYPQALQWLAEGRLSLQGRVVHLAPSRRPAAGAAADMLVSPALEQGF
Sequences:
>Translated_224_residues MPLQLAVLASGNGSNLQAVLDRAAQGVLDVEVRLVASNKEDACALDRARRAGIPVWARNHGSFAGREEFDAALVDAIRAS GADTIMLAGYMRLLTPYFLNAFPGRVLNVHPALLPSFPGVRGVADAVEYGVRVAGCTVHFVDEIMDHGPVIIQAAVPVSA CDSRDDVLQRVHAAEHRIYPQALQWLAEGRLSLQGRVVHLAPSRRPAAGAAADMLVSPALEQGF >Mature_223_residues PLQLAVLASGNGSNLQAVLDRAAQGVLDVEVRLVASNKEDACALDRARRAGIPVWARNHGSFAGREEFDAALVDAIRASG ADTIMLAGYMRLLTPYFLNAFPGRVLNVHPALLPSFPGVRGVADAVEYGVRVAGCTVHFVDEIMDHGPVIIQAAVPVSAC DSRDDVLQRVHAAEHRIYPQALQWLAEGRLSLQGRVVHLAPSRRPAAGAAADMLVSPALEQGF
Specific function: De novo purine biosynthesis; third step. [C]
COG id: COG0299
COG function: function code F; Folate-dependent phosphoribosylglycinamide formyltransferase PurN
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GART family [H]
Homologues:
Organism=Homo sapiens, GI4503915, Length=190, Percent_Identity=44.7368421052632, Blast_Score=163, Evalue=1e-40, Organism=Homo sapiens, GI209869995, Length=190, Percent_Identity=44.7368421052632, Blast_Score=163, Evalue=1e-40, Organism=Homo sapiens, GI209869993, Length=190, Percent_Identity=44.7368421052632, Blast_Score=163, Evalue=1e-40, Organism=Escherichia coli, GI1788846, Length=211, Percent_Identity=45.0236966824645, Blast_Score=186, Evalue=9e-49, Organism=Escherichia coli, GI1787483, Length=192, Percent_Identity=32.2916666666667, Blast_Score=108, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17567511, Length=181, Percent_Identity=40.3314917127072, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6320616, Length=199, Percent_Identity=30.6532663316583, Blast_Score=78, Evalue=1e-15, Organism=Drosophila melanogaster, GI24582400, Length=189, Percent_Identity=47.0899470899471, Blast_Score=169, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002376 - InterPro: IPR001555 - InterPro: IPR004607 [H]
Pfam domain/function: PF00551 Formyl_trans_N [H]
EC number: =2.1.2.2 [H]
Molecular weight: Translated: 23873; Mature: 23741
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: PS00373 GART
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLQLAVLASGNGSNLQAVLDRAAQGVLDVEVRLVASNKEDACALDRARRAGIPVWARNH CCEEEEEEECCCCCHHHHHHHHHHCCEEEEEEEEEECCCCHHHHHHHHHHCCCCEEECCC GSFAGREEFDAALVDAIRASGADTIMLAGYMRLLTPYFLNAFPGRVLNVHPALLPSFPGV CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECHHHCCCCCCH RGVADAVEYGVRVAGCTVHFVDEIMDHGPVIIQAAVPVSACDSRDDVLQRVHAAEHRIYP HHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHCCCHHHHHHHHHHHHHCCCH QALQWLAEGRLSLQGRVVHLAPSRRPAAGAAADMLVSPALEQGF HHHHHHHCCCCEECCEEEEECCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure PLQLAVLASGNGSNLQAVLDRAAQGVLDVEVRLVASNKEDACALDRARRAGIPVWARNH CEEEEEEECCCCCHHHHHHHHHHCCEEEEEEEEEECCCCHHHHHHHHHHCCCCEEECCC GSFAGREEFDAALVDAIRASGADTIMLAGYMRLLTPYFLNAFPGRVLNVHPALLPSFPGV CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECHHHCCCCCCH RGVADAVEYGVRVAGCTVHFVDEIMDHGPVIIQAAVPVSACDSRDDVLQRVHAAEHRIYP HHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHCCCHHHHHHHHHHHHHCCCH QALQWLAEGRLSLQGRVVHLAPSRRPAAGAAADMLVSPALEQGF HHHHHHHCCCCEECCEEEEECCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3301838; 9205837; 9278503; 10954745; 2204419; 1522592; 1631098; 9698564; 10606510 [H]