| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is gmk
Identifier: 78357761
GI number: 78357761
Start: 2721190
End: 2721810
Strand: Reverse
Name: gmk
Synonym: Dde_2719
Alternate gene names: 78357761
Gene position: 2721810-2721190 (Counterclockwise)
Preceding gene: 78357762
Following gene: 78357760
Centisome position: 72.97
GC content: 61.35
Gene sequence:
>621_bases ATGGTCCGTCCCCGTTCCGGCATAGTGCTGGTGCTCTGCGCACCCTCTGGCACAGGAAAAACCACGCTTACCCGCCGCCT GCTGGAAGAATTCCCCCGGTTTGCCTTTTCTGTATCCTACACCACACGCCAGCCGCGTGCGGGCGAAGAGCACGGGCGCG AATACAACTTTGTCGATGAAGAAACGTTCATCCGGCTGCGTGATGAAGGCTTTTTTGCCGAATGGGCCGAAGTGCACGGA AATTTTTACGGAACCCCGCTGGAAGACACCCGCCAGCTGCTGGCCCGCGGGCGTGATGTGCTTTTTGACATCGATGTGCA GGGCGCGGCGCAGCTGCGTGGTTCGCTTAAGCAGGGCTGCTATGTGTTTATTCTGCCGCCGTCCGGTGCCGAGCTTGAGC GCCGGCTGCGTGCCAGAGGCACCGACCCCGAAGATACCATCCGCCGTCGTCTGGCCAACGCCCGCCGCGAACTGCAGCAG GCCCACTGGTTCAACGCCTGGATAGTGAATGACAATCTGGAGCAGGCGTATGACGAGTTGCGTGCCGCGTATCTGGCTGC CACCCTGTCGCCCACCTGCCGCCCGGAACTGGTGGACGAACTGCTGCAGGATTGGAGATGA
Upstream 100 bases:
>100_bases AGACGCGGTCCATCATCGTCACCGATTCCAACCATGTCATACTGTCCGCCATTCAGGCGGAAACCATAGGACAACGTTTC ATTCAGGAGGAAAACAGTTA
Downstream 100 bases:
>100_bases TGATGCCGGAACTTGTGGTTGCTCTTGATTATCCTGAAAGCGAACAGGCTGTTGCCATGGCTGCACGGCTGCAAGGAAGC TGCCCCTGGGTCAAGGTGGG
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MVRPRSGIVLVLCAPSGTGKTTLTRRLLEEFPRFAFSVSYTTRQPRAGEEHGREYNFVDEETFIRLRDEGFFAEWAEVHG NFYGTPLEDTRQLLARGRDVLFDIDVQGAAQLRGSLKQGCYVFILPPSGAELERRLRARGTDPEDTIRRRLANARRELQQ AHWFNAWIVNDNLEQAYDELRAAYLAATLSPTCRPELVDELLQDWR
Sequences:
>Translated_206_residues MVRPRSGIVLVLCAPSGTGKTTLTRRLLEEFPRFAFSVSYTTRQPRAGEEHGREYNFVDEETFIRLRDEGFFAEWAEVHG NFYGTPLEDTRQLLARGRDVLFDIDVQGAAQLRGSLKQGCYVFILPPSGAELERRLRARGTDPEDTIRRRLANARRELQQ AHWFNAWIVNDNLEQAYDELRAAYLAATLSPTCRPELVDELLQDWR >Mature_206_residues MVRPRSGIVLVLCAPSGTGKTTLTRRLLEEFPRFAFSVSYTTRQPRAGEEHGREYNFVDEETFIRLRDEGFFAEWAEVHG NFYGTPLEDTRQLLARGRDVLFDIDVQGAAQLRGSLKQGCYVFILPPSGAELERRLRARGTDPEDTIRRRLANARRELQQ AHWFNAWIVNDNLEQAYDELRAAYLAATLSPTCRPELVDELLQDWR
Specific function: Essential for recycling GMP and indirectly, cGMP
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain
Homologues:
Organism=Homo sapiens, GI226874833, Length=178, Percent_Identity=42.1348314606742, Blast_Score=139, Evalue=1e-33, Organism=Homo sapiens, GI4504221, Length=178, Percent_Identity=42.1348314606742, Blast_Score=139, Evalue=1e-33, Organism=Homo sapiens, GI226874831, Length=178, Percent_Identity=42.1348314606742, Blast_Score=139, Evalue=2e-33, Organism=Homo sapiens, GI38570142, Length=174, Percent_Identity=35.0574712643678, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI4505237, Length=188, Percent_Identity=30.8510638297872, Blast_Score=91, Evalue=5e-19, Organism=Homo sapiens, GI262118263, Length=187, Percent_Identity=31.0160427807487, Blast_Score=91, Evalue=6e-19, Organism=Homo sapiens, GI262118259, Length=187, Percent_Identity=31.0160427807487, Blast_Score=91, Evalue=6e-19, Organism=Homo sapiens, GI262118255, Length=188, Percent_Identity=30.8510638297872, Blast_Score=91, Evalue=6e-19, Organism=Homo sapiens, GI21361598, Length=198, Percent_Identity=29.7979797979798, Blast_Score=85, Evalue=4e-17, Organism=Homo sapiens, GI14780902, Length=200, Percent_Identity=31.5, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI52630447, Length=183, Percent_Identity=30.0546448087432, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI111154074, Length=176, Percent_Identity=29.5454545454545, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI186700629, Length=189, Percent_Identity=27.5132275132275, Blast_Score=71, Evalue=6e-13, Organism=Homo sapiens, GI186700627, Length=189, Percent_Identity=27.5132275132275, Blast_Score=71, Evalue=7e-13, Organism=Homo sapiens, GI186972120, Length=189, Percent_Identity=27.5132275132275, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI21536464, Length=190, Percent_Identity=26.8421052631579, Blast_Score=67, Evalue=8e-12, Organism=Escherichia coli, GI1790080, Length=204, Percent_Identity=42.156862745098, Blast_Score=156, Evalue=1e-39, Organism=Caenorhabditis elegans, GI193203132, Length=176, Percent_Identity=42.0454545454545, Blast_Score=141, Evalue=2e-34, Organism=Caenorhabditis elegans, GI17508835, Length=176, Percent_Identity=42.0454545454545, Blast_Score=140, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17557440, Length=190, Percent_Identity=29.4736842105263, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71988048, Length=174, Percent_Identity=28.1609195402299, Blast_Score=68, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71988041, Length=174, Percent_Identity=28.1609195402299, Blast_Score=68, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6320662, Length=185, Percent_Identity=41.6216216216216, Blast_Score=152, Evalue=3e-38, Organism=Drosophila melanogaster, GI21356141, Length=176, Percent_Identity=43.1818181818182, Blast_Score=135, Evalue=2e-32, Organism=Drosophila melanogaster, GI161077626, Length=189, Percent_Identity=30.6878306878307, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI24640542, Length=176, Percent_Identity=31.8181818181818, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI45554489, Length=176, Percent_Identity=31.8181818181818, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI45554481, Length=176, Percent_Identity=31.8181818181818, Blast_Score=84, Evalue=8e-17, Organism=Drosophila melanogaster, GI116007136, Length=176, Percent_Identity=31.8181818181818, Blast_Score=84, Evalue=8e-17, Organism=Drosophila melanogaster, GI85724806, Length=176, Percent_Identity=31.8181818181818, Blast_Score=84, Evalue=9e-17, Organism=Drosophila melanogaster, GI221330162, Length=192, Percent_Identity=30.2083333333333, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI221330166, Length=192, Percent_Identity=30.2083333333333, Blast_Score=70, Evalue=7e-13, Organism=Drosophila melanogaster, GI221330164, Length=192, Percent_Identity=30.2083333333333, Blast_Score=70, Evalue=9e-13, Organism=Drosophila melanogaster, GI161078487, Length=189, Percent_Identity=25.9259259259259, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24648808, Length=189, Percent_Identity=25.9259259259259, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI161078485, Length=177, Percent_Identity=26.5536723163842, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI24648810, Length=177, Percent_Identity=26.5536723163842, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI281362230, Length=189, Percent_Identity=25.9259259259259, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI281362232, Length=177, Percent_Identity=26.5536723163842, Blast_Score=68, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KGUA_DESDG (Q30XT1)
Other databases:
- EMBL: CP000112 - RefSeq: YP_389210.1 - HSSP: P60546 - ProteinModelPortal: Q30XT1 - SMR: Q30XT1 - STRING: Q30XT1 - GeneID: 3757742 - GenomeReviews: CP000112_GR - KEGG: dde:Dde_2719 - NMPDR: fig|207559.3.peg.3072 - eggNOG: COG0194 - HOGENOM: HBG671982 - OMA: EWAEFAG - ProtClustDB: CLSK704923 - BioCyc: DDES207559:DDE_2719-MONOMER - GO: GO:0005737 - HAMAP: MF_00328 - InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 - SMART: SM00072 - TIGRFAMs: TIGR03263
Pfam domain/function: PF00625 Guanylate_kin
EC number: =2.7.4.8
Molecular weight: Translated: 23732; Mature: 23732
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: PS00856 GUANYLATE_KINASE_1; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRPRSGIVLVLCAPSGTGKTTLTRRLLEEFPRFAFSVSYTTRQPRAGEEHGREYNFVDE CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCHHEEEEEECCCCCCCCHHCCCCCCCCCH ETFIRLRDEGFFAEWAEVHGNFYGTPLEDTRQLLARGRDVLFDIDVQGAAQLRGSLKQGC HHEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCC YVFILPPSGAELERRLRARGTDPEDTIRRRLANARRELQQAHWFNAWIVNDNLEQAYDEL EEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHH RAAYLAATLSPTCRPELVDELLQDWR HHHHHHHHCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MVRPRSGIVLVLCAPSGTGKTTLTRRLLEEFPRFAFSVSYTTRQPRAGEEHGREYNFVDE CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCHHEEEEEECCCCCCCCHHCCCCCCCCCH ETFIRLRDEGFFAEWAEVHGNFYGTPLEDTRQLLARGRDVLFDIDVQGAAQLRGSLKQGC HHEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCC YVFILPPSGAELERRLRARGTDPEDTIRRRLANARRELQQAHWFNAWIVNDNLEQAYDEL EEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHH RAAYLAATLSPTCRPELVDELLQDWR HHHHHHHHCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA