| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357753
Identifier: 78357753
GI number: 78357753
Start: 2711776
End: 2713440
Strand: Direct
Name: 78357753
Synonym: Dde_2711
Alternate gene names: NA
Gene position: 2711776-2713440 (Clockwise)
Preceding gene: 78357749
Following gene: 78357754
Centisome position: 72.7
GC content: 64.62
Gene sequence:
>1665_bases ATGCCCGTCATCACCATTACAGACCATCTAGGCAACAGCACCGAAGCAGAAGCGCCCGCAGGCGCCCCGCTTTCGCGCGC GGTATACACCAGCGGCGCCGTGCCCGCACCGCCGCTGTGTTCCGGCATCGGACGCTGCGGACTGTGCCGCATGCGCATCA GTCCCGCGCCGGTTCCCCACGCCGACGATTTGGCCTTTTTTTCTCCAGCCCGGCTGCAGCAGGGCTGGCGGCTGGGCTGC CGCCACAGCGTCAGCGACGGATTGCGCATAACTCTGCCGCACATACCGCCGGTACAAAGCGCCACACGGCCCGCAAAAAC CACCGGACAACTGGGGCTGGCGGTTGACCTGGGCACCACAAGCCTGCACTGGGCCGCGGTAGACACAGCAGCAGACACCC TCAGCATTGTGGCGCAGGGACAGGAGACAAACCCGCAGATGGGTGCAGGCAGCGAGGTCATGTCGCGGCTGGCTGCGGCC GCTGATCCGGCAGTGCGCGGCAGGCTGGCGGCTCTGGTCAAAAGCAGGCTGGCCGCCCTGACAGATTTTCTGCACCGCGA GACAGGACAGCCGGTCACCTCGCTTTGTGTGGCCGGCAACGCTGCCATGACATACATTCTGCTCGACCTGCCGGTGGAAG GCCTGAGCCGGGCACCTTACAGGCTGGATTACCGCGGCGATGAAACCGTCCGGCTGTGCGGCACGGCGCACAATACAGAC ACCCCGCTGCCGCCGGTTTACATTCCGCCGGTTCCCGCACCTTTTGTCGGAGCGGACATCAGCGCCGGAATGGCCGCACT GCTGTGCGATGAATCCGCACCGCCTCCGTATCCTTTTGTTCTGGCCGATCTGGGCACAAACGGCGAATTTGTACTGGCGC TGTCTCCCGCACATTCAATAGTGACCAGTGTGGCCATGGGCCCCGCTCTCGAGGGCATAGGCATGACCCACGGCAGCATG GCCTGCCCGGGCGCGGCCACGGCATTCAGCGCCACCCCGCTCGGTCTGGTGCCCGCAGTGCTGGATGCGCAGGGCATCCC TGTCGTCAGCCCTCCGGCATCGCTGCGCCCCGCCGACATAAAAGCGGGCGGTATGGCCGCAGCACAGAGTATCCGCAGCA TAAGCGGCACCGGCTACCTTTCGCTCATCACTGTTCTGCTGCAGACAGGGGCCATCACTCCTGACGGGCAGTTCAACACA CAGCCGTCCTCCGTGGCGGGCCGCAGACTGGCACGCGCCGTTGTGCATGACAGCCCGCAGGCCCCGACTCAGGGAGCCTG CCTGCGTCTCAATGCCTCGGTTACACTTTCGGCCCGCGACATTGAAGAGATTCTAAAGGTGAAAGCCGCTTTCTCGCTTG CTTTTGAACGCCTGCTGTGCGAAGCCTCGCTCTCGCCGGCGGATGTGCGCCGTGTCTTTCTGGCAGGTGCGCTGGGACAG CACGTTTCTCCGGCCGATCTTGAAACACTGGGCTTTCTGCCCCGCGGACTGGCACAATGCACCACGGCGGCGGGCAATAC CGCCCTGCGGGGCGCCATGCACATGCTCACCCGCCATCACTGCCGTACCCGCGCCGCGCAATGGAGCGCAGGCGCCATTG TGGCCGATCTGACTTCAGACCCCGCATTCACCACCAACTTCATGCGCCATATGCGCTTTTCATAA
Upstream 100 bases:
>100_bases CGCCGGACGCAGCACAGGGTATGATGGCTGCAGGACAGCATGCCGGCTTTACGGCCCGCGCTGCATTCATATATCACATT CCGGCCACAGATCACAGACC
Downstream 100 bases:
>100_bases TATTATGCATCAAGGAATACTCACTCCGCCTACACGGCAGACTCAGGATATACTGGCCCGTTACAGACAGATACTGGCCG GAGTCATGCCGCTGCGTCAG
Product: iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: Electron Transfer Protein; Corrinoid Activation/Regeneration Protein; Ferredoxin Domain-Containing Protein
Number of amino acids: Translated: 554; Mature: 553
Protein sequence:
>554_residues MPVITITDHLGNSTEAEAPAGAPLSRAVYTSGAVPAPPLCSGIGRCGLCRMRISPAPVPHADDLAFFSPARLQQGWRLGC RHSVSDGLRITLPHIPPVQSATRPAKTTGQLGLAVDLGTTSLHWAAVDTAADTLSIVAQGQETNPQMGAGSEVMSRLAAA ADPAVRGRLAALVKSRLAALTDFLHRETGQPVTSLCVAGNAAMTYILLDLPVEGLSRAPYRLDYRGDETVRLCGTAHNTD TPLPPVYIPPVPAPFVGADISAGMAALLCDESAPPPYPFVLADLGTNGEFVLALSPAHSIVTSVAMGPALEGIGMTHGSM ACPGAATAFSATPLGLVPAVLDAQGIPVVSPPASLRPADIKAGGMAAAQSIRSISGTGYLSLITVLLQTGAITPDGQFNT QPSSVAGRRLARAVVHDSPQAPTQGACLRLNASVTLSARDIEEILKVKAAFSLAFERLLCEASLSPADVRRVFLAGALGQ HVSPADLETLGFLPRGLAQCTTAAGNTALRGAMHMLTRHHCRTRAAQWSAGAIVADLTSDPAFTTNFMRHMRFS
Sequences:
>Translated_554_residues MPVITITDHLGNSTEAEAPAGAPLSRAVYTSGAVPAPPLCSGIGRCGLCRMRISPAPVPHADDLAFFSPARLQQGWRLGC RHSVSDGLRITLPHIPPVQSATRPAKTTGQLGLAVDLGTTSLHWAAVDTAADTLSIVAQGQETNPQMGAGSEVMSRLAAA ADPAVRGRLAALVKSRLAALTDFLHRETGQPVTSLCVAGNAAMTYILLDLPVEGLSRAPYRLDYRGDETVRLCGTAHNTD TPLPPVYIPPVPAPFVGADISAGMAALLCDESAPPPYPFVLADLGTNGEFVLALSPAHSIVTSVAMGPALEGIGMTHGSM ACPGAATAFSATPLGLVPAVLDAQGIPVVSPPASLRPADIKAGGMAAAQSIRSISGTGYLSLITVLLQTGAITPDGQFNT QPSSVAGRRLARAVVHDSPQAPTQGACLRLNASVTLSARDIEEILKVKAAFSLAFERLLCEASLSPADVRRVFLAGALGQ HVSPADLETLGFLPRGLAQCTTAAGNTALRGAMHMLTRHHCRTRAAQWSAGAIVADLTSDPAFTTNFMRHMRFS >Mature_553_residues PVITITDHLGNSTEAEAPAGAPLSRAVYTSGAVPAPPLCSGIGRCGLCRMRISPAPVPHADDLAFFSPARLQQGWRLGCR HSVSDGLRITLPHIPPVQSATRPAKTTGQLGLAVDLGTTSLHWAAVDTAADTLSIVAQGQETNPQMGAGSEVMSRLAAAA DPAVRGRLAALVKSRLAALTDFLHRETGQPVTSLCVAGNAAMTYILLDLPVEGLSRAPYRLDYRGDETVRLCGTAHNTDT PLPPVYIPPVPAPFVGADISAGMAALLCDESAPPPYPFVLADLGTNGEFVLALSPAHSIVTSVAMGPALEGIGMTHGSMA CPGAATAFSATPLGLVPAVLDAQGIPVVSPPASLRPADIKAGGMAAAQSIRSISGTGYLSLITVLLQTGAITPDGQFNTQ PSSVAGRRLARAVVHDSPQAPTQGACLRLNASVTLSARDIEEILKVKAAFSLAFERLLCEASLSPADVRRVFLAGALGQH VSPADLETLGFLPRGLAQCTTAAGNTALRGAMHMLTRHHCRTRAAQWSAGAIVADLTSDPAFTTNFMRHMRFS
Specific function: Unknown
COG id: COG3894
COG function: function code R; Uncharacterized metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57364; Mature: 57233
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: PS00699 NITROGENASE_1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVITITDHLGNSTEAEAPAGAPLSRAVYTSGAVPAPPLCSGIGRCGLCRMRISPAPVPH CCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCC ADDLAFFSPARLQQGWRLGCRHSVSDGLRITLPHIPPVQSATRPAKTTGQLGLAVDLGTT CCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCC SLHWAAVDTAADTLSIVAQGQETNPQMGAGSEVMSRLAAAADPAVRGRLAALVKSRLAAL CEEEEEHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH TDFLHRETGQPVTSLCVAGNAAMTYILLDLPVEGLSRAPYRLDYRGDETVRLCGTAHNTD HHHHHHHCCCCHHHHHHCCCCEEEEEEEECCHHHHCCCCEEEECCCCCEEEEEECCCCCC TPLPPVYIPPVPAPFVGADISAGMAALLCDESAPPPYPFVLADLGTNGEFVLALSPAHSI CCCCCEEECCCCCCCCCCCHHHCCEEEEECCCCCCCCCEEEEECCCCCCEEEEECCHHHH VTSVAMGPALEGIGMTHGSMACPGAATAFSATPLGLVPAVLDAQGIPVVSPPASLRPADI HHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEECCCCCCCCCCC KAGGMAAAQSIRSISGTGYLSLITVLLQTGAITPDGQFNTQPSSVAGRRLARAVVHDSPQ CCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC APTQGACLRLNASVTLSARDIEEILKVKAAFSLAFERLLCEASLSPADVRRVFLAGALGQ CCCCCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC HVSPADLETLGFLPRGLAQCTTAAGNTALRGAMHMLTRHHCRTRAAQWSAGAIVADLTSD CCCCCCHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC PAFTTNFMRHMRFS CCHHHHHHHHHCCC >Mature Secondary Structure PVITITDHLGNSTEAEAPAGAPLSRAVYTSGAVPAPPLCSGIGRCGLCRMRISPAPVPH CEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCC ADDLAFFSPARLQQGWRLGCRHSVSDGLRITLPHIPPVQSATRPAKTTGQLGLAVDLGTT CCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCC SLHWAAVDTAADTLSIVAQGQETNPQMGAGSEVMSRLAAAADPAVRGRLAALVKSRLAAL CEEEEEHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH TDFLHRETGQPVTSLCVAGNAAMTYILLDLPVEGLSRAPYRLDYRGDETVRLCGTAHNTD HHHHHHHCCCCHHHHHHCCCCEEEEEEEECCHHHHCCCCEEEECCCCCEEEEEECCCCCC TPLPPVYIPPVPAPFVGADISAGMAALLCDESAPPPYPFVLADLGTNGEFVLALSPAHSI CCCCCEEECCCCCCCCCCCHHHCCEEEEECCCCCCCCCEEEEECCCCCCEEEEECCHHHH VTSVAMGPALEGIGMTHGSMACPGAATAFSATPLGLVPAVLDAQGIPVVSPPASLRPADI HHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEECCCCCCCCCCC KAGGMAAAQSIRSISGTGYLSLITVLLQTGAITPDGQFNTQPSSVAGRRLARAVVHDSPQ CCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC APTQGACLRLNASVTLSARDIEEILKVKAAFSLAFERLLCEASLSPADVRRVFLAGALGQ CCCCCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC HVSPADLETLGFLPRGLAQCTTAAGNTALRGAMHMLTRHHCRTRAAQWSAGAIVADLTSD CCCCCCHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC PAFTTNFMRHMRFS CCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA