| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357747
Identifier: 78357747
GI number: 78357747
Start: 2707717
End: 2708160
Strand: Direct
Name: 78357747
Synonym: Dde_2705
Alternate gene names: NA
Gene position: 2707717-2708160 (Clockwise)
Preceding gene: 78357746
Following gene: 78357748
Centisome position: 72.59
GC content: 56.31
Gene sequence:
>444_bases ATGGCGGGGTCTTTCAAATTCAAGCTGCAGCAGGTATTGGACTACCGGACGCAGCTTGAAGAGCAGGCAAAGATGGAATT TGCCCGTGCCCAGCAGCAGTACCGCCATCAGACTGCTCTGGTGGAACAGCTCCGCCGCAAGCTTGATATCCAGCTGCAGC AGCTGTATGCATCGCCCACCATGAGTCAGGCGGAACGCTGGCTGGCGCACAACTATATTCAGGCCATCAAGCAGGACATT CAGGCCGCGGAACAACGCCTGCTGCAGACAGCCCAGCAACTGACCCGCGCGCGGCAGAACCTCATCCAGAAAGCGCAGGA GCGCAAACTGCTGGACAAGCTGAAAAGCAAACAGGCCGAGCGGCATGATCTGGAAGAAAAGCTGAAGGAACAACACACCA ATGACGAAACAGCCACACTTCGCTACCAGCCTCCGTCTTTCTAA
Upstream 100 bases:
>100_bases TTTGCTTTGCCTGTAGCTGGCGACTGCACACGTTGCAGCCGTACATTCCGGCTATATGATATTGTCTTCACAGCACCCAT TATCTGAAGAGGTTTTCCGC
Downstream 100 bases:
>100_bases GCTGTGCAAATGGCTCTTTTTTGTTGCCTGCATAAAGCTGGCAGTCATCGGCACCCTGATGTGGGACGGCACCCTTTCCG GCTTTTCACTGCAGCCGCCG
Product: putative flagellar FliJ protein
Products: NA
Alternate protein names: Flagellar Biosynthesis Chaperone; Flagellar FliJ Protein
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MAGSFKFKLQQVLDYRTQLEEQAKMEFARAQQQYRHQTALVEQLRRKLDIQLQQLYASPTMSQAERWLAHNYIQAIKQDI QAAEQRLLQTAQQLTRARQNLIQKAQERKLLDKLKSKQAERHDLEEKLKEQHTNDETATLRYQPPSF
Sequences:
>Translated_147_residues MAGSFKFKLQQVLDYRTQLEEQAKMEFARAQQQYRHQTALVEQLRRKLDIQLQQLYASPTMSQAERWLAHNYIQAIKQDI QAAEQRLLQTAQQLTRARQNLIQKAQERKLLDKLKSKQAERHDLEEKLKEQHTNDETATLRYQPPSF >Mature_146_residues AGSFKFKLQQVLDYRTQLEEQAKMEFARAQQQYRHQTALVEQLRRKLDIQLQQLYASPTMSQAERWLAHNYIQAIKQDIQ AAEQRLLQTAQQLTRARQNLIQKAQERKLLDKLKSKQAERHDLEEKLKEQHTNDETATLRYQPPSF
Specific function: Unknown
COG id: COG2882
COG function: function code NUO; Flagellar biosynthesis chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17521; Mature: 17390
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGSFKFKLQQVLDYRTQLEEQAKMEFARAQQQYRHQTALVEQLRRKLDIQLQQLYASPT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC MSQAERWLAHNYIQAIKQDIQAAEQRLLQTAQQLTRARQNLIQKAQERKLLDKLKSKQAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHDLEEKLKEQHTNDETATLRYQPPSF HHHHHHHHHHHCCCCCCEEEECCCCCC >Mature Secondary Structure AGSFKFKLQQVLDYRTQLEEQAKMEFARAQQQYRHQTALVEQLRRKLDIQLQQLYASPT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC MSQAERWLAHNYIQAIKQDIQAAEQRLLQTAQQLTRARQNLIQKAQERKLLDKLKSKQAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHDLEEKLKEQHTNDETATLRYQPPSF HHHHHHHHHHHCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA