| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is proB
Identifier: 78357731
GI number: 78357731
Start: 2695769
End: 2696908
Strand: Reverse
Name: proB
Synonym: Dde_2689
Alternate gene names: 78357731
Gene position: 2696908-2695769 (Counterclockwise)
Preceding gene: 161485606
Following gene: 78357730
Centisome position: 72.3
GC content: 61.05
Gene sequence:
>1140_bases ATGGACTGGCAGACCGAGCGCGGGCAGGTTCTGGATTCCGCCCGCAGAGTGGTTATCAAGGTGGGGAGTGCGGTGCTTAC TTCCGGCAACGGGCTGGATGTGGGCGTGGTGGATAATCTGGTGGCCCAGATTGCCGACCTGCACGGCCGCGGCGTAGATG TGGTGCTGGTGTCCTCCGGTGCGGTTTCGGCCGGGCGTGCCGTGCTGCGGCGCTGCTGCGAGATAAAAGGCATGCCGCAC AAGCAGGCGGCATCGGCCGTGGGGCAGAGCCGTCTCATGCACTATTATGACGAGGCGTTCGGCAGACACGGCATTATTTC CGCGCAGATACTGCTCACCAAGGACGACCTGCGCAGCCGTCACCGTTTTCTTAACGCCCGCAACACGTTTGCGGCACTTA TGGACTGGCATGCCGTGCCCATTGTCAATGAAAACGACACAGTGGCCGTACGCGAACTGGAATTCGGCGACAATGACAGT CTGGCCAGTCTGCTGCTGAATGTGGTGGATGCCGACCTGTTCATCAATCTGACATCGGCCGGCGGAGTATATGCCGACAA CCCCGACACCAACCCCGATGCGCGTGTCATGGAATGCATAGAAAATGTGCACGGGCTTAATCTGGACGTGATGTGCGGCG GTAAAACCGCTGTGGGGTCGGGCGGCATGTATTCAAAATTGCTGGCGGCACGGCGGGCAGCACAGCTTGGGGTGCCCACG CTTATTCTGCCCGGACGCAAGCCCGATGCCATGCTGCGGGCTTTTGCCGGTGACGAACCCGGAACATGGGTGCGACCGGA AAAGAAAACCGTTTCGGCACGCAAATTCTGGCTGGCGTATCACGCTGATCCCACAGGATCGGTGGTGGTGGATGACGGTG CTGTAAAAGCGCTTGAGGCGGGCAAAAGCCTGCTGCCTGCCGGAATCATCGGTGTTGAAGGGGGCTTCGGGCGTGGTGCG CTTGTGCGTGTCACTTCTGCGGCCGGTGCCGTGGTGGCTGTGGGCCTCAGCAACTACCCCGCCGCCGACCTGCGGCGCAT CATGGGCCACCGCACGGCGGAACTTACGGCCATTCTGGGTGACAACCAGTATCCGGAAGCCATCCACCGCGATAATATGC TGATGGACGCCGTGGTGTGA
Upstream 100 bases:
>100_bases TTGATTCTTCGCGCCAGATAGAGCCTGAACCCGAAGAGGAATTTGATGTGGAAGTAGTCTGGGTGCGCGAATAGTCTTTT AGCGGAGGCGTCTGAAAGCC
Downstream 100 bases:
>100_bases CCTGCGGCGCAGCGGTCATGATAAAGTGAGGATATATGTCTGAGACTCCGTGTGTTCTTACCATTGCCGGTTCCGATTCC GGCGGCGGGGCCGGAATTCA
Product: gamma-glutamyl kinase
Products: NA
Alternate protein names: Gamma-glutamyl kinase; GK
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MDWQTERGQVLDSARRVVIKVGSAVLTSGNGLDVGVVDNLVAQIADLHGRGVDVVLVSSGAVSAGRAVLRRCCEIKGMPH KQAASAVGQSRLMHYYDEAFGRHGIISAQILLTKDDLRSRHRFLNARNTFAALMDWHAVPIVNENDTVAVRELEFGDNDS LASLLLNVVDADLFINLTSAGGVYADNPDTNPDARVMECIENVHGLNLDVMCGGKTAVGSGGMYSKLLAARRAAQLGVPT LILPGRKPDAMLRAFAGDEPGTWVRPEKKTVSARKFWLAYHADPTGSVVVDDGAVKALEAGKSLLPAGIIGVEGGFGRGA LVRVTSAAGAVVAVGLSNYPAADLRRIMGHRTAELTAILGDNQYPEAIHRDNMLMDAVV
Sequences:
>Translated_379_residues MDWQTERGQVLDSARRVVIKVGSAVLTSGNGLDVGVVDNLVAQIADLHGRGVDVVLVSSGAVSAGRAVLRRCCEIKGMPH KQAASAVGQSRLMHYYDEAFGRHGIISAQILLTKDDLRSRHRFLNARNTFAALMDWHAVPIVNENDTVAVRELEFGDNDS LASLLLNVVDADLFINLTSAGGVYADNPDTNPDARVMECIENVHGLNLDVMCGGKTAVGSGGMYSKLLAARRAAQLGVPT LILPGRKPDAMLRAFAGDEPGTWVRPEKKTVSARKFWLAYHADPTGSVVVDDGAVKALEAGKSLLPAGIIGVEGGFGRGA LVRVTSAAGAVVAVGLSNYPAADLRRIMGHRTAELTAILGDNQYPEAIHRDNMLMDAVV >Mature_379_residues MDWQTERGQVLDSARRVVIKVGSAVLTSGNGLDVGVVDNLVAQIADLHGRGVDVVLVSSGAVSAGRAVLRRCCEIKGMPH KQAASAVGQSRLMHYYDEAFGRHGIISAQILLTKDDLRSRHRFLNARNTFAALMDWHAVPIVNENDTVAVRELEFGDNDS LASLLLNVVDADLFINLTSAGGVYADNPDTNPDARVMECIENVHGLNLDVMCGGKTAVGSGGMYSKLLAARRAAQLGVPT LILPGRKPDAMLRAFAGDEPGTWVRPEKKTVSARKFWLAYHADPTGSVVVDDGAVKALEAGKSLLPAGIIGVEGGFGRGA LVRVTSAAGAVVAVGLSNYPAADLRRIMGHRTAELTAILGDNQYPEAIHRDNMLMDAVV
Specific function: Catalyzes the transfer of a phosphate group to glutamate to form glutamate 5-phosphate which rapidly cyclizes to 5- oxoproline
COG id: COG0263
COG function: function code E; Glutamate 5-kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PUA domain
Homologues:
Organism=Homo sapiens, GI21361368, Length=303, Percent_Identity=32.3432343234323, Blast_Score=115, Evalue=4e-26, Organism=Homo sapiens, GI62912457, Length=301, Percent_Identity=32.2259136212625, Blast_Score=114, Evalue=1e-25, Organism=Escherichia coli, GI1786437, Length=369, Percent_Identity=40.3794037940379, Blast_Score=248, Evalue=7e-67, Organism=Caenorhabditis elegans, GI17569969, Length=330, Percent_Identity=34.8484848484849, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17569967, Length=330, Percent_Identity=34.8484848484849, Blast_Score=139, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6320506, Length=412, Percent_Identity=30.3398058252427, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6321822, Length=421, Percent_Identity=28.978622327791, Blast_Score=167, Evalue=3e-42, Organism=Drosophila melanogaster, GI21357643, Length=302, Percent_Identity=33.4437086092715, Blast_Score=130, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PROB_DESDG (Q30XW1)
Other databases:
- EMBL: CP000112 - RefSeq: YP_389180.1 - ProteinModelPortal: Q30XW1 - SMR: Q30XW1 - STRING: Q30XW1 - GeneID: 3757712 - GenomeReviews: CP000112_GR - KEGG: dde:Dde_2689 - NMPDR: fig|207559.3.peg.3013 - eggNOG: COG0263 - HOGENOM: HBG507643 - OMA: TFGDNDM - ProtClustDB: PRK05429 - BioCyc: DDES207559:DDE_2689-MONOMER - GO: GO:0005737 - HAMAP: MF_00456 - InterPro: IPR001048 - InterPro: IPR001057 - InterPro: IPR011529 - InterPro: IPR005715 - InterPro: IPR019797 - InterPro: IPR002478 - InterPro: IPR015947 - Gene3D: G3DSA:3.40.1160.10 - PIRSF: PIRSF000729 - PRINTS: PR00474 - SMART: SM00359 - TIGRFAMs: TIGR01027
Pfam domain/function: PF00696 AA_kinase; PF01472 PUA; SSF53633 Aa_kinase; SSF88697 PUA-like
EC number: =2.7.2.11
Molecular weight: Translated: 40265; Mature: 40265
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: PS00902 GLUTAMATE_5_KINASE; PS50890 PUA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWQTERGQVLDSARRVVIKVGSAVLTSGNGLDVGVVDNLVAQIADLHGRGVDVVLVSSG CCCCCCHHHHHHHHHHEEEEECCEEEECCCCCEEHHHHHHHHHHHHHCCCCEEEEEEECC AVSAGRAVLRRCCEIKGMPHKQAASAVGQSRLMHYYDEAFGRHGIISAQILLTKDDLRSR CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHH HRFLNARNTFAALMDWHAVPIVNENDTVAVRELEFGDNDSLASLLLNVVDADLFINLTSA HHHHCCCHHHHHHHCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEEEECC GGVYADNPDTNPDARVMECIENVHGLNLDVMCGGKTAVGSGGMYSKLLAARRAAQLGVPT CCEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCEECCCCCHHHHHHHHHHHHHCCCCE LILPGRKPDAMLRAFAGDEPGTWVRPEKKTVSARKFWLAYHADPTGSVVVDDGAVKALEA EEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEECCCCHHHHHH GKSLLPAGIIGVEGGFGRGALVRVTSAAGAVVAVGLSNYPAADLRRIMGHRTAELTAILG CCHHCCCCEEECCCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCEEEEEEC DNQYPEAIHRDNMLMDAVV CCCCCHHHHHCCCHHHHCC >Mature Secondary Structure MDWQTERGQVLDSARRVVIKVGSAVLTSGNGLDVGVVDNLVAQIADLHGRGVDVVLVSSG CCCCCCHHHHHHHHHHEEEEECCEEEECCCCCEEHHHHHHHHHHHHHCCCCEEEEEEECC AVSAGRAVLRRCCEIKGMPHKQAASAVGQSRLMHYYDEAFGRHGIISAQILLTKDDLRSR CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHHH HRFLNARNTFAALMDWHAVPIVNENDTVAVRELEFGDNDSLASLLLNVVDADLFINLTSA HHHHCCCHHHHHHHCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCEEEEEEECC GGVYADNPDTNPDARVMECIENVHGLNLDVMCGGKTAVGSGGMYSKLLAARRAAQLGVPT CCEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCEECCCCCHHHHHHHHHHHHHCCCCE LILPGRKPDAMLRAFAGDEPGTWVRPEKKTVSARKFWLAYHADPTGSVVVDDGAVKALEA EEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEECCCCHHHHHH GKSLLPAGIIGVEGGFGRGALVRVTSAAGAVVAVGLSNYPAADLRRIMGHRTAELTAILG CCHHCCCCEEECCCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCEEEEEEC DNQYPEAIHRDNMLMDAVV CCCCCHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA