| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is pgk
Identifier: 78357672
GI number: 78357672
Start: 2645441
End: 2646685
Strand: Reverse
Name: pgk
Synonym: Dde_2630
Alternate gene names: 78357672
Gene position: 2646685-2645441 (Counterclockwise)
Preceding gene: 78357673
Following gene: 78357667
Centisome position: 70.95
GC content: 60.96
Gene sequence:
>1245_bases ATGCATGATCACATTCGCACCTTTTTTATGCTGTATCCTTCAGTCTTAGCCCGCAGGAGACTTCATATGAACGTACTGAA AATGACTGATCTTGATCTGCGCGGAAAGCGTGTGCTTATCCGCGAGGACCTGAACGCTCCCATCAAGGACGGGGCGGTGG CCAACGACAACAGGCTGCGCGCAGCCGCACCTACCATCCGCCTTGCCATGCAGGCAGGAGCACGGGTTATGGTGATGTCG CATCTGGGCCGCCCGGCAGAAGGCGCGTTTGACGAATCGGCATCCATGGCACCTGTGGCGGCACGGCTGGCCGATATTCT GGGCTGCCCCGTGCCGGTGGTGCGGGACTGGCTGGACGGGGTGGATGTGCCCGAAGGCGGCGTGGTGCTGACAGAGAATG TACGCTTCAACAAGGGCGAAAAAAAGAACGACGAAGAGCTGGGCAGGCGCATGGCGGCCCTGTGCGATGTTTATGTGATG GATGCTTTCGGCACGGCGCACCGTGCGCAGGCTTCCACCCATGCCGTTGCCGCATTTGCTCCCGTGGCCTGCGCGGGTCC GCTGCTGGCGGCGGAGCTGGAAGCTCTGGGCAAGGCTCTTGGCGCCCCGCGCCACCCTGTGGTTGGCATCATCGGCGGTT CCAAGGTCTCGACCAAGCTCACTCTGCTGGAAACGCTTTCCTCCAAGGTCGACAAGCTTATTGTGGGCGGGGGCATTGCC AATACGTTTATCCGTGCCGCAGGTTTTGCCGTGGGCAAATCACTGTATGAAGAAGATCTGGTGGCCGAAGCCGCCCGCCT GATGCAGGCCGCAGCCGCAGCCGGAGGAGAGATTCCCGTGCCTGTGGATGTGGTGGTGGCCACGGAGTTTGCCGAAACTG CAACGCCTGTCTGCAAGCCGGTGGATCAGGTGGCCGATAATGAGATGATTATGGACATCGGGCCGCAAACCGCCGCCATG TATGCAGAGGTGCTGCGCGGAGCAGGAACCATCGTGTGGAACGGACCTGTCGGGGTGTTCGAGTTTGATGCCTTCGGTGC CGGTACAGAAGCGCTGTGCAGGGCTGTGGCGCAAAGCAGCGCCTTTTCCATCGCCGGCGGCGGTGACACTGTGGCCGCTG TGGATAAATACGGCGTCCGTGACGGCGTATCCTATATATCCACGGGCGGAGGGGCTTTTCTGGAGTTTCTGGAAGGCAAG GAGCTGCCGGCAGTGGCCATGCTGGAACAGCGCGCAAAAGCCTGA
Upstream 100 bases:
>100_bases TACGGCAGACAATGTGGCTGCCGTGGCAAAAGAAGTGCTGTAGCGTTTTTCGGGGATGACCCCGGACGCTGTTCCATGTA CAACAAAAGGTGCGGGTGTG
Downstream 100 bases:
>100_bases GCACTGCGAGGGCGTAACTGCCGGTGAGCTTGTGCCGCCACCGGCTGCTGCCGCACCGGTTTTCCTTCGTTATATCTGAA ACAGCAGTCCCCTGCCGGAC
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MHDHIRTFFMLYPSVLARRRLHMNVLKMTDLDLRGKRVLIREDLNAPIKDGAVANDNRLRAAAPTIRLAMQAGARVMVMS HLGRPAEGAFDESASMAPVAARLADILGCPVPVVRDWLDGVDVPEGGVVLTENVRFNKGEKKNDEELGRRMAALCDVYVM DAFGTAHRAQASTHAVAAFAPVACAGPLLAAELEALGKALGAPRHPVVGIIGGSKVSTKLTLLETLSSKVDKLIVGGGIA NTFIRAAGFAVGKSLYEEDLVAEAARLMQAAAAAGGEIPVPVDVVVATEFAETATPVCKPVDQVADNEMIMDIGPQTAAM YAEVLRGAGTIVWNGPVGVFEFDAFGAGTEALCRAVAQSSAFSIAGGGDTVAAVDKYGVRDGVSYISTGGGAFLEFLEGK ELPAVAMLEQRAKA
Sequences:
>Translated_414_residues MHDHIRTFFMLYPSVLARRRLHMNVLKMTDLDLRGKRVLIREDLNAPIKDGAVANDNRLRAAAPTIRLAMQAGARVMVMS HLGRPAEGAFDESASMAPVAARLADILGCPVPVVRDWLDGVDVPEGGVVLTENVRFNKGEKKNDEELGRRMAALCDVYVM DAFGTAHRAQASTHAVAAFAPVACAGPLLAAELEALGKALGAPRHPVVGIIGGSKVSTKLTLLETLSSKVDKLIVGGGIA NTFIRAAGFAVGKSLYEEDLVAEAARLMQAAAAAGGEIPVPVDVVVATEFAETATPVCKPVDQVADNEMIMDIGPQTAAM YAEVLRGAGTIVWNGPVGVFEFDAFGAGTEALCRAVAQSSAFSIAGGGDTVAAVDKYGVRDGVSYISTGGGAFLEFLEGK ELPAVAMLEQRAKA >Mature_414_residues MHDHIRTFFMLYPSVLARRRLHMNVLKMTDLDLRGKRVLIREDLNAPIKDGAVANDNRLRAAAPTIRLAMQAGARVMVMS HLGRPAEGAFDESASMAPVAARLADILGCPVPVVRDWLDGVDVPEGGVVLTENVRFNKGEKKNDEELGRRMAALCDVYVM DAFGTAHRAQASTHAVAAFAPVACAGPLLAAELEALGKALGAPRHPVVGIIGGSKVSTKLTLLETLSSKVDKLIVGGGIA NTFIRAAGFAVGKSLYEEDLVAEAARLMQAAAAAGGEIPVPVDVVVATEFAETATPVCKPVDQVADNEMIMDIGPQTAAM YAEVLRGAGTIVWNGPVGVFEFDAFGAGTEALCRAVAQSSAFSIAGGGDTVAAVDKYGVRDGVSYISTGGGAFLEFLEGK ELPAVAMLEQRAKA
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI4505763, Length=415, Percent_Identity=39.0361445783133, Blast_Score=268, Evalue=5e-72, Organism=Homo sapiens, GI31543397, Length=413, Percent_Identity=38.2566585956416, Blast_Score=261, Evalue=8e-70, Organism=Escherichia coli, GI1789294, Length=391, Percent_Identity=65.2173913043478, Blast_Score=508, Evalue=1e-145, Organism=Caenorhabditis elegans, GI17508823, Length=413, Percent_Identity=41.8886198547215, Blast_Score=290, Evalue=1e-78, Organism=Saccharomyces cerevisiae, GI6319857, Length=421, Percent_Identity=40.3800475059382, Blast_Score=278, Evalue=1e-75, Organism=Drosophila melanogaster, GI17136394, Length=415, Percent_Identity=40.2409638554217, Blast_Score=258, Evalue=6e-69, Organism=Drosophila melanogaster, GI24581203, Length=411, Percent_Identity=37.4695863746959, Blast_Score=240, Evalue=1e-63,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 43395; Mature: 43395
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDHIRTFFMLYPSVLARRRLHMNVLKMTDLDLRGKRVLIREDLNAPIKDGAVANDNRLR CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC AAAPTIRLAMQAGARVMVMSHLGRPAEGAFDESASMAPVAARLADILGCPVPVVRDWLDG HHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCC VDVPEGGVVLTENVRFNKGEKKNDEELGRRMAALCDVYVMDAFGTAHRAQASTHAVAAFA CCCCCCCEEEECCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH PVACAGPLLAAELEALGKALGAPRHPVVGIIGGSKVSTKLTLLETLSSKVDKLIVGGGIA HHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHEEECCCHH NTFIRAAGFAVGKSLYEEDLVAEAARLMQAAAAAGGEIPVPVDVVVATEFAETATPVCKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHCCHHHHH VDQVADNEMIMDIGPQTAAMYAEVLRGAGTIVWNGPVGVFEFDAFGAGTEALCRAVAQSS HHHHCCCCEEEECCCHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCCHHHHHHHHHHCC AFSIAGGGDTVAAVDKYGVRDGVSYISTGGGAFLEFLEGKELPAVAMLEQRAKA CEEEECCCCCCHHHHHHCCHHCHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHCC >Mature Secondary Structure MHDHIRTFFMLYPSVLARRRLHMNVLKMTDLDLRGKRVLIREDLNAPIKDGAVANDNRLR CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC AAAPTIRLAMQAGARVMVMSHLGRPAEGAFDESASMAPVAARLADILGCPVPVVRDWLDG HHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCC VDVPEGGVVLTENVRFNKGEKKNDEELGRRMAALCDVYVMDAFGTAHRAQASTHAVAAFA CCCCCCCEEEECCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH PVACAGPLLAAELEALGKALGAPRHPVVGIIGGSKVSTKLTLLETLSSKVDKLIVGGGIA HHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHEEECCCHH NTFIRAAGFAVGKSLYEEDLVAEAARLMQAAAAAGGEIPVPVDVVVATEFAETATPVCKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHCCHHHHH VDQVADNEMIMDIGPQTAAMYAEVLRGAGTIVWNGPVGVFEFDAFGAGTEALCRAVAQSS HHHHCCCCEEEECCCHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCCHHHHHHHHHHCC AFSIAGGGDTVAAVDKYGVRDGVSYISTGGGAFLEFLEGKELPAVAMLEQRAKA CEEEECCCCCCHHHHHHCCHHCHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA