| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357543
Identifier: 78357543
GI number: 78357543
Start: 2525516
End: 2525725
Strand: Reverse
Name: 78357543
Synonym: Dde_2500
Alternate gene names: NA
Gene position: 2525725-2525516 (Counterclockwise)
Preceding gene: 78357545
Following gene: 78357542
Centisome position: 67.71
GC content: 52.86
Gene sequence:
>210_bases ATGGCAAAGGCACCGGAAAATTTTGCGGAGACGGTCAAAGAAGTCCGCCAGCAACTGGGGCTCAGCCAGGAAGAGCTAGC TCACGAGCTGGGCGTGAGCTTTTCCACAATCAACCGCTGGGAAAACAGCAAGACGGTTCCCTTCAAGCTGGCGAGAAGGC AATTCGAAGCTTTTTGTGAGCGGATGAAAAAACAAGGGAAGTTGGCCTGA
Upstream 100 bases:
>100_bases TTGTCACCTGCTATATTGAGGACCGTAATTTACGTTGGGCATATTGCGTTCTCTCGTTGCCGGTGAATTGGCGACGCACC AGGAATTGAGGCAAACCGAT
Downstream 100 bases:
>100_bases TGAATAAAAAACAACTTTCCGAGCGCGATATCTGCACGAAGTACATCACTCCTGCCCTTGAGAAGGCTGGCTGGGATGTT ACCACTCAGGTCCGTGAAGA
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MAKAPENFAETVKEVRQQLGLSQEELAHELGVSFSTINRWENSKTVPFKLARRQFEAFCERMKKQGKLA
Sequences:
>Translated_69_residues MAKAPENFAETVKEVRQQLGLSQEELAHELGVSFSTINRWENSKTVPFKLARRQFEAFCERMKKQGKLA >Mature_68_residues AKAPENFAETVKEVRQQLGLSQEELAHELGVSFSTINRWENSKTVPFKLARRQFEAFCERMKKQGKLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7969; Mature: 7838
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKAPENFAETVKEVRQQLGLSQEELAHELGVSFSTINRWENSKTVPFKLARRQFEAFCE CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH RMKKQGKLA HHHHCCCCC >Mature Secondary Structure AKAPENFAETVKEVRQQLGLSQEELAHELGVSFSTINRWENSKTVPFKLARRQFEAFCE CCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH RMKKQGKLA HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA