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The map label for this gene is 78357431

Identifier: 78357431

GI number: 78357431

Start: 2412457

End: 2413062

Strand: Reverse

Name: 78357431

Synonym: Dde_2388

Alternate gene names: NA

Gene position: 2413062-2412457 (Counterclockwise)

Preceding gene: 78357432

Following gene: 78357430

Centisome position: 64.69

GC content: 50.83

Gene sequence:

>606_bases
ATGAAGAATATTCCAGAAAAGTATACAAAAAAATTCAGTAAGGATGAGATCAATTCACTGCCTCTCCGGCGGTATACCGG
TCCTGTTACGCTTGTGCGTACAGAAGACGAGCTGGAAGCGGCGCTGCGGGCGCTGCATTCTGAAGAATTGATCGGATTTG
ACACAGAGACCCGTCCCACGTTCCGCAAGGGCAAGATGAATCTGCCTTCGCTTATCCAGTTTGCGGCGCGGGATATGGTC
TATCTTATCCATCTTGGTTGGGTGGCCTTCAGTGAAGGCATACAGGACGTATTGTCGTCTCCGCATATCGTGAAGACCGG
TGTTGCGGTGCGTGACGACATCAAGGATTTGAAAAAACTGGCCTGTTTTGAAGACGCCGCAGTGGTCGATCTGGGCGAGG
TGGCGCGTGAACTGGGCATGGAAACTCACGGATTGCGTAACCTTGCGGCAAATCTGCTTGAATTTCGCATTTCCAAAGCT
GCCCAGTGTTCAAACTGGAGTAATCTGGAACTGTCCAGGCAACAGATAAGTTATGCCGCCACAGATGCCTGGGTAAGCCG
CGAAATCCACCTGCGGATGCGCGAACTGGGACTTGTTTCATTTTAA

Upstream 100 bases:

>100_bases
AGCCGCAGTTTGTGGCATCCGGGGGTTTACGGAAGGGGGGCGCTTCATGTATTAGAACGCCGCCGGCTTCTTCCGGCCAC
GACTTACCGGACCCTGCTCA

Downstream 100 bases:

>100_bases
CGATATTCTGTTTTCGTACTGCGCACGAAAAACGACAGCCGCTTCGGGTACTCCGGAGCGGCTGTCGTTTTTCATGGCGG
GCAGGGCCGGTTGTTTGTTA

Product: 3'-5' exonuclease

Products: NA

Alternate protein names: 3-5' Exonuclease Domain Protein; 3- 5' Exonuclease Domain Protein; Ribonuclease D; 3 Exoribonuclease Family Protein; Exonuclease

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MKNIPEKYTKKFSKDEINSLPLRRYTGPVTLVRTEDELEAALRALHSEELIGFDTETRPTFRKGKMNLPSLIQFAARDMV
YLIHLGWVAFSEGIQDVLSSPHIVKTGVAVRDDIKDLKKLACFEDAAVVDLGEVARELGMETHGLRNLAANLLEFRISKA
AQCSNWSNLELSRQQISYAATDAWVSREIHLRMRELGLVSF

Sequences:

>Translated_201_residues
MKNIPEKYTKKFSKDEINSLPLRRYTGPVTLVRTEDELEAALRALHSEELIGFDTETRPTFRKGKMNLPSLIQFAARDMV
YLIHLGWVAFSEGIQDVLSSPHIVKTGVAVRDDIKDLKKLACFEDAAVVDLGEVARELGMETHGLRNLAANLLEFRISKA
AQCSNWSNLELSRQQISYAATDAWVSREIHLRMRELGLVSF
>Mature_201_residues
MKNIPEKYTKKFSKDEINSLPLRRYTGPVTLVRTEDELEAALRALHSEELIGFDTETRPTFRKGKMNLPSLIQFAARDMV
YLIHLGWVAFSEGIQDVLSSPHIVKTGVAVRDDIKDLKKLACFEDAAVVDLGEVARELGMETHGLRNLAANLLEFRISKA
AQCSNWSNLELSRQQISYAATDAWVSREIHLRMRELGLVSF

Specific function: Unknown

COG id: COG0749

COG function: function code L; DNA polymerase I - 3'-5' exonuclease and polymerase domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI110735439, Length=179, Percent_Identity=29.0502793296089, Blast_Score=68, Evalue=4e-12,
Organism=Homo sapiens, GI145279204, Length=214, Percent_Identity=30.8411214953271, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22761; Mature: 22761

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIPEKYTKKFSKDEINSLPLRRYTGPVTLVRTEDELEAALRALHSEELIGFDTETRPT
CCCCCHHHHHHCCHHHHHCCCHHHCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCC
FRKGKMNLPSLIQFAARDMVYLIHLGWVAFSEGIQDVLSSPHIVKTGVAVRDDIKDLKKL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHH
ACFEDAAVVDLGEVARELGMETHGLRNLAANLLEFRISKAAQCSNWSNLELSRQQISYAA
HHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
TDAWVSREIHLRMRELGLVSF
HHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKNIPEKYTKKFSKDEINSLPLRRYTGPVTLVRTEDELEAALRALHSEELIGFDTETRPT
CCCCCHHHHHHCCHHHHHCCCHHHCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCC
FRKGKMNLPSLIQFAARDMVYLIHLGWVAFSEGIQDVLSSPHIVKTGVAVRDDIKDLKKL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHH
ACFEDAAVVDLGEVARELGMETHGLRNLAANLLEFRISKAAQCSNWSNLELSRQQISYAA
HHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
TDAWVSREIHLRMRELGLVSF
HHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA