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The map label for this gene is yccM [C]

Identifier: 78357432

GI number: 78357432

Start: 2413161

End: 2414519

Strand: Reverse

Name: yccM [C]

Synonym: Dde_2389

Alternate gene names: 78357432

Gene position: 2414519-2413161 (Counterclockwise)

Preceding gene: 78357433

Following gene: 78357431

Centisome position: 64.73

GC content: 64.61

Gene sequence:

>1359_bases
ATGTCTGCAGGACGCGATGACCTGACGGTCTGCGGCACCGTGACATTGTGGCTGCTGCCTGTGGCGCCTTGTCTTGCCGT
ACTGCTTTTTGCCGCTCATTGGCTGCGCGCCGGTCATATCTGGCTGGCCGCAGCGCTGGCCGCTGCCGCCATGCTGCTGT
GGCTGCGCAGTGCCTGGCTGCGTGCTGCAGGTGCGGTGTTGCTGACCGGCGCGGGCTACAGCTGGGCGCATACGGCTTCC
CTGCTTGTTCAGGGGCGCATTGCAGACGGTGCGGACTGGGTGCGACCCGCGGTCATCATGGGTGCGGTCATAGCTTTCAC
CGGCGGGGCCATGCTGCTTCTGCTGGGCAAGGCCGCGGCCCGCCGGTACAGCCGTCACCGGCAGACGGCGGGACTGCAGG
TTGCGGCCTGCCTGATGGCTTTTGCGCTGCTGTGGGCGGTACGGCACAGGGCCGCCTCGGTTATGCCGCTGCTGGCCGAC
CGTTTCTGGCCGGGGGCCGGATGGGTGCAGATGCTGGCGGCTTCGGTATATGCCGCATGGGTTGCCCGTCTGCTGTATGC
CCCTGCTTCTTCGCGGGTTGTGCGCCCGCGGATATGGGCGTTGTTTTCTGCGGTGTTTTTCGGTCAGCTGGCGTTGGGGC
TGCTGGGGGCCGACATGCTGCTTATGACGGGCAATCTGCATCTGCCGGTGCCTGCGCTGATTGTAGCGGCGCCGTTATTC
AGAGGCGACGGCTTTTTCATGCTGGGGTTGTTCGGTGTTTCGGTATTGCTGCTGGGGCCTGCGTGGTGCAGCCATCTTTG
CTATGTGGGGGCGTGGGATGACCGGTGCAGCCGTTTGGCACAGGGGGCTCAGGCGCCGGTATCGCGCAGGGCCCGTGTGC
TGTACCGCGGGATGCTTGCCGGTGTTGTGTTCGGCGGTGCGGTGCTGCTGCGCATGGCAGGGGCTTCTTCTTTTACTGCA
GCGACGGCGGCGGTTTTTTTCGGACTGTGCAGCGTGGGGGTGATGGTTTATTTCAGCCGCCGGGCAGGGCGTATGGTGCA
CTGCTCGGTGTGGTGTCCGCTTGGTATGGTGGCGGCTCTGGCGGGCCGGATTTCGCCGTGGCGCATGCGCGTGGGGCAGG
GGTGCACACAGTGCGGCGCATGCATGCGGGTGTGCCGCTATTCCGCCATTACTCCTGCAGCGCTGCAAAGAGGCCGGCCG
GAAATTTCGTGCACACTGTGCCGCGACTGTACGGCAGTGTGCCGTCCCGCAGCAATGCAGCTGACTTTGGCAGGCATGCG
GCCAGACACGGCACGGGCTGTTTTTTCCGCGGTTACAGCTTCTTTGCATGCTGTTTTTTTGGTTGTGGCGCGTATGTAG

Upstream 100 bases:

>100_bases
GAAATTCTCAGACGCAGTCTTGATTTTTACATGCTGCACTACGAAGCCGGTCTGCGGTTCGGCACATTAGTGGAAAGCAG
GCGGCAGGAGTTTGAAGATT

Downstream 100 bases:

>100_bases
CCGCAGTTTGTGGCATCCGGGGGTTTACGGAAGGGGGGCGCTTCATGTATTAGAACGCCGCCGGCTTCTTCCGGCCACGA
CTTACCGGACCCTGCTCAAT

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MSAGRDDLTVCGTVTLWLLPVAPCLAVLLFAAHWLRAGHIWLAAALAAAAMLLWLRSAWLRAAGAVLLTGAGYSWAHTAS
LLVQGRIADGADWVRPAVIMGAVIAFTGGAMLLLLGKAAARRYSRHRQTAGLQVAACLMAFALLWAVRHRAASVMPLLAD
RFWPGAGWVQMLAASVYAAWVARLLYAPASSRVVRPRIWALFSAVFFGQLALGLLGADMLLMTGNLHLPVPALIVAAPLF
RGDGFFMLGLFGVSVLLLGPAWCSHLCYVGAWDDRCSRLAQGAQAPVSRRARVLYRGMLAGVVFGGAVLLRMAGASSFTA
ATAAVFFGLCSVGVMVYFSRRAGRMVHCSVWCPLGMVAALAGRISPWRMRVGQGCTQCGACMRVCRYSAITPAALQRGRP
EISCTLCRDCTAVCRPAAMQLTLAGMRPDTARAVFSAVTASLHAVFLVVARM

Sequences:

>Translated_452_residues
MSAGRDDLTVCGTVTLWLLPVAPCLAVLLFAAHWLRAGHIWLAAALAAAAMLLWLRSAWLRAAGAVLLTGAGYSWAHTAS
LLVQGRIADGADWVRPAVIMGAVIAFTGGAMLLLLGKAAARRYSRHRQTAGLQVAACLMAFALLWAVRHRAASVMPLLAD
RFWPGAGWVQMLAASVYAAWVARLLYAPASSRVVRPRIWALFSAVFFGQLALGLLGADMLLMTGNLHLPVPALIVAAPLF
RGDGFFMLGLFGVSVLLLGPAWCSHLCYVGAWDDRCSRLAQGAQAPVSRRARVLYRGMLAGVVFGGAVLLRMAGASSFTA
ATAAVFFGLCSVGVMVYFSRRAGRMVHCSVWCPLGMVAALAGRISPWRMRVGQGCTQCGACMRVCRYSAITPAALQRGRP
EISCTLCRDCTAVCRPAAMQLTLAGMRPDTARAVFSAVTASLHAVFLVVARM
>Mature_451_residues
SAGRDDLTVCGTVTLWLLPVAPCLAVLLFAAHWLRAGHIWLAAALAAAAMLLWLRSAWLRAAGAVLLTGAGYSWAHTASL
LVQGRIADGADWVRPAVIMGAVIAFTGGAMLLLLGKAAARRYSRHRQTAGLQVAACLMAFALLWAVRHRAASVMPLLADR
FWPGAGWVQMLAASVYAAWVARLLYAPASSRVVRPRIWALFSAVFFGQLALGLLGADMLLMTGNLHLPVPALIVAAPLFR
GDGFFMLGLFGVSVLLLGPAWCSHLCYVGAWDDRCSRLAQGAQAPVSRRARVLYRGMLAGVVFGGAVLLRMAGASSFTAA
TAAVFFGLCSVGVMVYFSRRAGRMVHCSVWCPLGMVAALAGRISPWRMRVGQGCTQCGACMRVCRYSAITPAALQRGRPE
ISCTLCRDCTAVCRPAAMQLTLAGMRPDTARAVFSAVTASLHAVFLVVARM

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48093; Mature: 47962

Theoretical pI: Translated: 11.35; Mature: 11.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SAGRDDLTVCGTVTLWLLPVAPCLAVLLFAAHWLRAGHIWLAAALAAAAMLLWLRSAWL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAAGAVLLTGAGYSWAHTASLLVQGRIADGADWVRPAVIMGAVIAFTGGAMLLLLGKAAA
HHCCCEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
RRYSRHRQTAGLQVAACLMAFALLWAVRHRAASVMPLLADRFWPGAGWVQMLAASVYAAW
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VARLLYAPASSRVVRPRIWALFSAVFFGQLALGLLGADMLLMTGNLHLPVPALIVAAPLF
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHH
RGDGFFMLGLFGVSVLLLGPAWCSHLCYVGAWDDRCSRLAQGAQAPVSRRARVLYRGMLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH
GVVFGGAVLLRMAGASSFTAATAAVFFGLCSVGVMVYFSRRAGRMVHCSVWCPLGMVAAL
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHH
AGRISPWRMRVGQGCTQCGACMRVCRYSAITPAALQRGRPEISCTLCRDCTAVCRPAAMQ
HCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCEEHHHHHHHHHHHCCHHHH
LTLAGMRPDTARAVFSAVTASLHAVFLVVARM
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA