| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is mlaA [H]
Identifier: 78357344
GI number: 78357344
Start: 2320171
End: 2321019
Strand: Direct
Name: mlaA [H]
Synonym: Dde_2301
Alternate gene names: 78357344
Gene position: 2320171-2321019 (Clockwise)
Preceding gene: 78357343
Following gene: 78357347
Centisome position: 62.2
GC content: 56.07
Gene sequence:
>849_bases ATGAAAAGGGGAGTTTTTACCGGTCTTGCAGCAATAATGCTGCTTGCCGCGGTCTGCACGGCACAGGCGGCACCGGTATC ACAGGGGGAACTGGTGACGCCTGAGCGCCTTGAAAAAGCGCAGATGGCTCCCGATGCCCGGGATGCGGCTCTTGCACAGC AAGAAGAAGAATTTCTGCTTGTTCTCAACAGAGACAATATCGACCCTGAATTCGAAGACTACGGAACAGAGACATCTTCT GTTCATGTGGCCGACCCCATTGAAGGCTGGAACCGTTTCTGGTTCGGCTTCAATGACTGGTTCTATAATAATCTCGCCGA TCCGGTCTGGCGCGGGTACGCTTATGTCACCCCCAGCGAACTGAGAACCGGTGCCGACAACTTTTTCCGCAACCTCGCCT ACCCTGTCCGGTTCATCAACTGCATCCTGCAGGGCAAATTTGTGGCTGCCGGAGTGGAAACATCGCGATTCATTGTCGAC AGCACCATCGGCGTGGGCGGTCTCATGCAGCCCTCACGCGCCAAGAAGCCCCTTGTAGAACCCGACAGAGAAGACTTCGG GCAAACCTTGGGATATTGGGGAGTCGGTGAAGGTTTCTACATCGTATGGCCATTTCTGGGACCATCGACGCTGCGAGACA GCGGCGGTCTGGTGGCCGATGCCGTCACTCACCCGCTGTACTATGTTACGCCCATGTGGCACGGATTTGCTCTGGCAGGG TACGATCAGCTGAACAAGTTCGGCGGCGTATATGACAACTACATGGCCATCAAGGCACCTGCGCTGGAACCCTACACCGC CATACGCGATGCGTATATCCAGACGCGGCGAAGCCGCATTGCGCGGTAA
Upstream 100 bases:
>100_bases CCTGACGAACTTATAACGCGTATCATTGCCAAGGCCGAAGAAGTCGGCAGGGCAAACGGCAACTGATACTGCGTCACCAG AAACGAGCAAAGAGGCATAT
Downstream 100 bases:
>100_bases AAAACAGCATCACAGGGGCGCTCAGGCGCCCCTTTTTCATGACCTGTTTTTTTCCGGCCGCGCAACGCGGGCTTGTCCGC ATGCGCCGTAAACCTGTCTG
Product: surface lipoprotein-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MKRGVFTGLAAIMLLAAVCTAQAAPVSQGELVTPERLEKAQMAPDARDAALAQQEEEFLLVLNRDNIDPEFEDYGTETSS VHVADPIEGWNRFWFGFNDWFYNNLADPVWRGYAYVTPSELRTGADNFFRNLAYPVRFINCILQGKFVAAGVETSRFIVD STIGVGGLMQPSRAKKPLVEPDREDFGQTLGYWGVGEGFYIVWPFLGPSTLRDSGGLVADAVTHPLYYVTPMWHGFALAG YDQLNKFGGVYDNYMAIKAPALEPYTAIRDAYIQTRRSRIAR
Sequences:
>Translated_282_residues MKRGVFTGLAAIMLLAAVCTAQAAPVSQGELVTPERLEKAQMAPDARDAALAQQEEEFLLVLNRDNIDPEFEDYGTETSS VHVADPIEGWNRFWFGFNDWFYNNLADPVWRGYAYVTPSELRTGADNFFRNLAYPVRFINCILQGKFVAAGVETSRFIVD STIGVGGLMQPSRAKKPLVEPDREDFGQTLGYWGVGEGFYIVWPFLGPSTLRDSGGLVADAVTHPLYYVTPMWHGFALAG YDQLNKFGGVYDNYMAIKAPALEPYTAIRDAYIQTRRSRIAR >Mature_282_residues MKRGVFTGLAAIMLLAAVCTAQAAPVSQGELVTPERLEKAQMAPDARDAALAQQEEEFLLVLNRDNIDPEFEDYGTETSS VHVADPIEGWNRFWFGFNDWFYNNLADPVWRGYAYVTPSELRTGADNFFRNLAYPVRFINCILQGKFVAAGVETSRFIVD STIGVGGLMQPSRAKKPLVEPDREDFGQTLGYWGVGEGFYIVWPFLGPSTLRDSGGLVADAVTHPLYYVTPMWHGFALAG YDQLNKFGGVYDNYMAIKAPALEPYTAIRDAYIQTRRSRIAR
Specific function: Actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane [H]
COG id: COG2853
COG function: function code M; Surface lipoprotein
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaA family [H]
Homologues:
Organism=Escherichia coli, GI1788688, Length=204, Percent_Identity=34.8039215686275, Blast_Score=94, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007428 [H]
Pfam domain/function: PF04333 VacJ [H]
EC number: NA
Molecular weight: Translated: 31491; Mature: 31491
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRGVFTGLAAIMLLAAVCTAQAAPVSQGELVTPERLEKAQMAPDARDAALAQQEEEFLL CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCEEE VLNRDNIDPEFEDYGTETSSVHVADPIEGWNRFWFGFNDWFYNNLADPVWRGYAYVTPSE EEECCCCCCCHHHCCCCCCEEEECCCCCCCHHEECCCHHHHHHHCCCHHHCCEEEECHHH LRTGADNFFRNLAYPVRFINCILQGKFVAAGVETSRFIVDSTIGVGGLMQPSRAKKPLVE HHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCCCCCCCHHCCCCCCC PDREDFGQTLGYWGVGEGFYIVWPFLGPSTLRDSGGLVADAVTHPLYYVTPMWHGFALAG CCHHHHHHHCCCCCCCCCCEEEEECCCCHHHCCCCCEEEHHHHCCEEEECCCCCCEEECC YDQLNKFGGVYDNYMAIKAPALEPYTAIRDAYIQTRRSRIAR HHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKRGVFTGLAAIMLLAAVCTAQAAPVSQGELVTPERLEKAQMAPDARDAALAQQEEEFLL CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCEEE VLNRDNIDPEFEDYGTETSSVHVADPIEGWNRFWFGFNDWFYNNLADPVWRGYAYVTPSE EEECCCCCCCHHHCCCCCCEEEECCCCCCCHHEECCCHHHHHHHCCCHHHCCEEEECHHH LRTGADNFFRNLAYPVRFINCILQGKFVAAGVETSRFIVDSTIGVGGLMQPSRAKKPLVE HHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCCCCCCCHHCCCCCCC PDREDFGQTLGYWGVGEGFYIVWPFLGPSTLRDSGGLVADAVTHPLYYVTPMWHGFALAG CCHHHHHHHCCCCCCCCCCEEEEECCCCHHHCCCCCEEEHHHHCCEEEECCCCCCEEECC YDQLNKFGGVYDNYMAIKAPALEPYTAIRDAYIQTRRSRIAR HHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]