Click here to switch to the map view.

The map label for this gene is yrbC [C]

Identifier: 78357343

GI number: 78357343

Start: 2319489

End: 2320136

Strand: Direct

Name: yrbC [C]

Synonym: Dde_2300

Alternate gene names: 78357343

Gene position: 2319489-2320136 (Clockwise)

Preceding gene: 78357342

Following gene: 78357344

Centisome position: 62.18

GC content: 54.32

Gene sequence:

>648_bases
ATGCTTGCAATGCGTTCCGTTTTCACCAGAAGCCTTCTGGCGTTTGTTTTCTGTACCGGGCTGCTTTGCACCGCCCCGCA
GGCGCAGGCGGCAGACCCCGGCGAAGAAGCGCGGGAAGCTCTCAGACACAACGTTGACGGTATCATAACGTTGCTGTCTT
CGGCGGAGTTCAAAGACCCGCAGACCAGGCCTCAAGTTCGCGGCGAAATTGAGGCGCTTATCCGCCAGAGATTTGATTAT
GAAGAATTCGCCATGCGGACCGTCGGACCGCGCTGGCGGTCTTTCAATGACGACCAGCGTCACCGCTTTGCAGAAGCCTT
CGCCGCACTGCTCCGGTCGTCATACATGGATCAGCTGGAAAGCTACAACGGCGAGAAGGTGGAATATGCGGACGAAAGGG
CTTCTTCTGACGGAAGCCGCGTAGAGGTGCAGACATTCATTGTACAGCCCGATAAAAAAATTCCCGTGGCATACCGCATG
TTGCATAAAGACCGCTGGGTAGTATACGATGTTCTTGTGGAAGGCATCAGTCTGGTAAAAAACTACCGGACACAGTTTCA
GGAACTGCTGCGCAAGGAATCTCCTGACGAACTTATAACGCGTATCATTGCCAAGGCCGAAGAAGTCGGCAGGGCAAACG
GCAACTGA

Upstream 100 bases:

>100_bases
GCCATGGACCTGCTGAAAGAGGGTGACGAGATACTGGAAACCGAATCGGCTCTGGATATTGAAGAATTAATCAGCAAATA
CGTGTTCGGAAAGGTGTAAC

Downstream 100 bases:

>100_bases
TACTGCGTCACCAGAAACGAGCAAAGAGGCATATATGAAAAGGGGAGTTTTTACCGGTCTTGCAGCAATAATGCTGCTTG
CCGCGGTCTGCACGGCACAG

Product: hypothetical protein

Products: NA

Alternate protein names: Luene Tolerance Protein; Luene Tolerance D; Luene Tolerance; Signal Peptide Protein; Luene Tolerance Ttg2 Superfamily; Periplasmic Efflux Protein; ABC Transporter; Luene-Tolerance ABC-Type Export Protein; Periplasmic Protein; Luene Tolerance-Like Protein

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MLAMRSVFTRSLLAFVFCTGLLCTAPQAQAADPGEEAREALRHNVDGIITLLSSAEFKDPQTRPQVRGEIEALIRQRFDY
EEFAMRTVGPRWRSFNDDQRHRFAEAFAALLRSSYMDQLESYNGEKVEYADERASSDGSRVEVQTFIVQPDKKIPVAYRM
LHKDRWVVYDVLVEGISLVKNYRTQFQELLRKESPDELITRIIAKAEEVGRANGN

Sequences:

>Translated_215_residues
MLAMRSVFTRSLLAFVFCTGLLCTAPQAQAADPGEEAREALRHNVDGIITLLSSAEFKDPQTRPQVRGEIEALIRQRFDY
EEFAMRTVGPRWRSFNDDQRHRFAEAFAALLRSSYMDQLESYNGEKVEYADERASSDGSRVEVQTFIVQPDKKIPVAYRM
LHKDRWVVYDVLVEGISLVKNYRTQFQELLRKESPDELITRIIAKAEEVGRANGN
>Mature_215_residues
MLAMRSVFTRSLLAFVFCTGLLCTAPQAQAADPGEEAREALRHNVDGIITLLSSAEFKDPQTRPQVRGEIEALIRQRFDY
EEFAMRTVGPRWRSFNDDQRHRFAEAFAALLRSSYMDQLESYNGEKVEYADERASSDGSRVEVQTFIVQPDKKIPVAYRM
LHKDRWVVYDVLVEGISLVKNYRTQFQELLRKESPDELITRIIAKAEEVGRANGN

Specific function: Unknown

COG id: COG2854

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, auxiliary component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24696; Mature: 24696

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAMRSVFTRSLLAFVFCTGLLCTAPQAQAADPGEEAREALRHNVDGIITLLSSAEFKDP
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCC
QTRPQVRGEIEALIRQRFDYEEFAMRTVGPRWRSFNDDQRHRFAEAFAALLRSSYMDQLE
CCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SYNGEKVEYADERASSDGSRVEVQTFIVQPDKKIPVAYRMLHKDRWVVYDVLVEGISLVK
HCCCCCCHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
NYRTQFQELLRKESPDELITRIIAKAEEVGRANGN
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLAMRSVFTRSLLAFVFCTGLLCTAPQAQAADPGEEAREALRHNVDGIITLLSSAEFKDP
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCC
QTRPQVRGEIEALIRQRFDYEEFAMRTVGPRWRSFNDDQRHRFAEAFAALLRSSYMDQLE
CCCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SYNGEKVEYADERASSDGSRVEVQTFIVQPDKKIPVAYRMLHKDRWVVYDVLVEGISLVK
HCCCCCCHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
NYRTQFQELLRKESPDELITRIIAKAEEVGRANGN
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA