| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357223
Identifier: 78357223
GI number: 78357223
Start: 2220622
End: 2221500
Strand: Reverse
Name: 78357223
Synonym: Dde_2180
Alternate gene names: NA
Gene position: 2221500-2220622 (Counterclockwise)
Preceding gene: 78357224
Following gene: 78357222
Centisome position: 59.55
GC content: 61.66
Gene sequence:
>879_bases ATGATCTTGACATCTGTGCGCCGCGGTCTGGCTGTGTGCCTGTTTCTGTTGCTGGTGCCTCTGGCCGCCGGTGCTGCGGA AGAGGGCTTTGTCCAGCAGTTTGAACAGGGAACAGTAGACTGGTGTGATGGCGTTGTACGGGCTGAAGGGACGGCGATAG CTCCTGCTTCGGCTGTAAGTCTGCCCCGTGCGCGTGCGCTGGCCCTGCGGGCTGCAGTTACCGAAGCCAGAGGCCGCCTG CTGCACACTGTGCGTTCTGTGCAGGTTACCCCCGGAATCACCGCGGGAGATATGCTGGATGCCGGCGGGGCGCTGTCGGA GTTTGTGCGCGGGCAGGTGCAGAACTCACGGATAGACCGGCAGGATTTTCTGGCGGACGGCTCAGCGCGGGTTGTTGTCA GTATTGCTTTGCGTGATGGTTTGCTGGGGCAGTTCCTTGCTCCGGCACTGCCGTTCAAGGTTGCCGCTTCACCGGTATCC GGCCGCAGTGTTCCGGCGTCGGAGGTTGCTGAGCCGCAGATTTTGCAGGACGGGGAATTTTCCGGTGTGGTCATTGATGC CAGAGGAACGGGAGCGCTTCCTGCCCTGATGCCTGTTGTGGTTCTGTCCGGAGGAGAGACCGTGTACGGCGTGAGGCAGG CTGTGCGGCGTTATGCGCTTGAGCGCGGTCTGGCAGTGTATGTGACAGACGGGCAGGCCGCAGCAGTTGCCGCGGTGGCG GGTAGTGCACCTCTCACTCTCAGGGCGGCCGCAGTGCAGGAATCCGCTCCGTCTGTTATTGTGCTTGATGACCCAGAGGC ACAGCTGCTGTATTCTCCGGCAGCGGTGAAAAGTCTGGCAGCCTGCCGTGTGGTGGTGTTGCTTGATGCGGTTTTCTGA
Upstream 100 bases:
>100_bases AGCATGCGGCTTTTGTGGATATATGGATAGATCATCTGGATGAAGCCATGGAGCGGCTGCTCGGCAGCCGCGGCTGACGG GAAGGCGAGGGGAGGAATGC
Downstream 100 bases:
>100_bases TGCGCCGGATGCTCACGGTTATGTTTTCTTATCTTTTTTTCCTGTCCATATTTTTACGGCACGCTGCGGTCAGGGCGCTG TATCGTGCAGGAGTGCATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MILTSVRRGLAVCLFLLLVPLAAGAAEEGFVQQFEQGTVDWCDGVVRAEGTAIAPASAVSLPRARALALRAAVTEARGRL LHTVRSVQVTPGITAGDMLDAGGALSEFVRGQVQNSRIDRQDFLADGSARVVVSIALRDGLLGQFLAPALPFKVAASPVS GRSVPASEVAEPQILQDGEFSGVVIDARGTGALPALMPVVVLSGGETVYGVRQAVRRYALERGLAVYVTDGQAAAVAAVA GSAPLTLRAAAVQESAPSVIVLDDPEAQLLYSPAAVKSLAACRVVVLLDAVF
Sequences:
>Translated_292_residues MILTSVRRGLAVCLFLLLVPLAAGAAEEGFVQQFEQGTVDWCDGVVRAEGTAIAPASAVSLPRARALALRAAVTEARGRL LHTVRSVQVTPGITAGDMLDAGGALSEFVRGQVQNSRIDRQDFLADGSARVVVSIALRDGLLGQFLAPALPFKVAASPVS GRSVPASEVAEPQILQDGEFSGVVIDARGTGALPALMPVVVLSGGETVYGVRQAVRRYALERGLAVYVTDGQAAAVAAVA GSAPLTLRAAAVQESAPSVIVLDDPEAQLLYSPAAVKSLAACRVVVLLDAVF >Mature_292_residues MILTSVRRGLAVCLFLLLVPLAAGAAEEGFVQQFEQGTVDWCDGVVRAEGTAIAPASAVSLPRARALALRAAVTEARGRL LHTVRSVQVTPGITAGDMLDAGGALSEFVRGQVQNSRIDRQDFLADGSARVVVSIALRDGLLGQFLAPALPFKVAASPVS GRSVPASEVAEPQILQDGEFSGVVIDARGTGALPALMPVVVLSGGETVYGVRQAVRRYALERGLAVYVTDGQAAAVAAVA GSAPLTLRAAAVQESAPSVIVLDDPEAQLLYSPAAVKSLAACRVVVLLDAVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30061; Mature: 30061
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILTSVRRGLAVCLFLLLVPLAAGAAEEGFVQQFEQGTVDWCDGVVRAEGTAIAPASAVS CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCCCCCCCCCEECCHHHHC LPRARALALRAAVTEARGRLLHTVRSVQVTPGITAGDMLDAGGALSEFVRGQVQNSRIDR CCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHCCCHHHHHHHHHHHHCCCCCH QDFLADGSARVVVSIALRDGLLGQFLAPALPFKVAASPVSGRSVPASEVAEPQILQDGEF HHHHCCCCCEEEEEEEHHCCHHHHHHHCCCCHHEECCCCCCCCCCHHHCCCCCEECCCCC SGVVIDARGTGALPALMPVVVLSGGETVYGVRQAVRRYALERGLAVYVTDGQAAAVAAVA CEEEEECCCCCCHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHEEEC GSAPLTLRAAAVQESAPSVIVLDDPEAQLLYSPAAVKSLAACRVVVLLDAVF CCCCEEEEEHHHHCCCCCEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MILTSVRRGLAVCLFLLLVPLAAGAAEEGFVQQFEQGTVDWCDGVVRAEGTAIAPASAVS CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHCCCCCCCCCEECCHHHHC LPRARALALRAAVTEARGRLLHTVRSVQVTPGITAGDMLDAGGALSEFVRGQVQNSRIDR CCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHCCCHHHHHHHHHHHHCCCCCH QDFLADGSARVVVSIALRDGLLGQFLAPALPFKVAASPVSGRSVPASEVAEPQILQDGEF HHHHCCCCCEEEEEEEHHCCHHHHHHHCCCCHHEECCCCCCCCCCHHHCCCCCEECCCCC SGVVIDARGTGALPALMPVVVLSGGETVYGVRQAVRRYALERGLAVYVTDGQAAAVAAVA CEEEEECCCCCCHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHEEEC GSAPLTLRAAAVQESAPSVIVLDDPEAQLLYSPAAVKSLAACRVVVLLDAVF CCCCEEEEEHHHHCCCCCEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA