| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78357113
Identifier: 78357113
GI number: 78357113
Start: 2113405
End: 2114670
Strand: Reverse
Name: 78357113
Synonym: Dde_2070
Alternate gene names: NA
Gene position: 2114670-2113405 (Counterclockwise)
Preceding gene: 78357114
Following gene: 78357112
Centisome position: 56.69
GC content: 55.77
Gene sequence:
>1266_bases GTGATTCGCTTTGGGCGACTCTTTTTATTGCTCATGCTGCTTGCGGCCTTAACCGGTTGCAAACAGGATGCAAAGAATTA CTGGAAGGATACCCGTAAGCTGTACCGGACGTATGTAAATACACCCGCTGCGCTGGACACGGATCAGGAACTGGACGTCA TGCCTGTGGAATCCAAGATAGCCACGGTTTTCACGGCAATGGACGAGCAGCTGGAGCAGATGCGCCGTGTGCTGGAAAAT CAGGACACTTTTCCTTCTGACGAATGGGTTGCCGGTTTTCTGGAGCGTTTCCCGTGGGTGAGCGGCGTCGCCGTGGTTGA TGCTGACGGCAATGTGCTGTTGCGCCAGCCCGAGCTTGAGCTGAAGGCATACAATTATGCGCCGTTGCTTGAAAAAGATG AAAATGCCCCTGAACGCGCAATGCGGGGGTATGCCGAAGCCAATCCCGTCGGACCGGAGTTTTATCTGGCCAATCCTGTT TTTTCGGGGCGCGAGGTCAAAGGGTTGCTGGTGGCACACTTTGACATACGCAATCTGCTGGCGTACAGCCCGAGCCCCGG CGACATTGTTCTTGTTTCCCGTGACGCGGTGCTGTGGCCCGGTAAATATGTGTACGACCAGACGCCGCTTGCCGCTGTCG ACTGGTCGGCAGCGCTGAAAAGCGATGTGACGGGCGAAGCGGAAGACGAACGCGGACATTTTTTGTGGATAGCCCGCTAT CTGGGCGGAGTGCCTCTGGTGTATGCCGCTTCTGTTGATTCTTACCCGGAAGACCCCGCCGCCATGGCGGCGCTTGCCGC ATGGTTTGAAACTCGCGAAGCCTTGCGGAACGGGCCTGCGGCAGCACAGACCGAGGTTGATCCTTCTGCCATGGCTGCGC GCGCGCAGACTGTTGCTCCCGCTGCTGAAGACCTGCCGTCGGATGAACTGCCGTCAGGCAGTGTGATGCCGGGGCTGCAT GAAGAACCTGCTCCTGCACCTCCTACGACAGACTATGTTTACTCTGTGCAGATCGGAGCATTTATCAACGGGAACTATGC TGCCGAACGTGTGGCACTGCTTCGTGACGCCGGTTTTGATCCCTGTACGATGAAGCTGTACGATAAAAATGGTCAGCTCT GGAACATCGTGCAGATAGGGGATTACCGTGACTCCGCTGATGCATGGAACAGAGTGCGTGATTTTGTGAAAGCCGGAACC GGCTTTGATTACAATATAGAGATTCTTGATGCCGGTGTTGTCAGCCGACGCAAGCAATGTCCCTAA
Upstream 100 bases:
>100_bases CTGCTGACCATGCTGGAAACCCTTGCGGAACGCCTAGAGGCCCGCGCTGCCGGCTAAGTCAGGCACTTTCGTTTTTATCT ATTTATATCAGGAGAGTTAC
Downstream 100 bases:
>100_bases TACGGTGAACTGATAAGGAGACATAATGCGACAGGTTACCGTGACTGAACATCTGCTGCTGCACCAGACTAAATCGCCTG CTGCAACGGGGCAGTTTACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MIRFGRLFLLLMLLAALTGCKQDAKNYWKDTRKLYRTYVNTPAALDTDQELDVMPVESKIATVFTAMDEQLEQMRRVLEN QDTFPSDEWVAGFLERFPWVSGVAVVDADGNVLLRQPELELKAYNYAPLLEKDENAPERAMRGYAEANPVGPEFYLANPV FSGREVKGLLVAHFDIRNLLAYSPSPGDIVLVSRDAVLWPGKYVYDQTPLAAVDWSAALKSDVTGEAEDERGHFLWIARY LGGVPLVYAASVDSYPEDPAAMAALAAWFETREALRNGPAAAQTEVDPSAMAARAQTVAPAAEDLPSDELPSGSVMPGLH EEPAPAPPTTDYVYSVQIGAFINGNYAAERVALLRDAGFDPCTMKLYDKNGQLWNIVQIGDYRDSADAWNRVRDFVKAGT GFDYNIEILDAGVVSRRKQCP
Sequences:
>Translated_421_residues MIRFGRLFLLLMLLAALTGCKQDAKNYWKDTRKLYRTYVNTPAALDTDQELDVMPVESKIATVFTAMDEQLEQMRRVLEN QDTFPSDEWVAGFLERFPWVSGVAVVDADGNVLLRQPELELKAYNYAPLLEKDENAPERAMRGYAEANPVGPEFYLANPV FSGREVKGLLVAHFDIRNLLAYSPSPGDIVLVSRDAVLWPGKYVYDQTPLAAVDWSAALKSDVTGEAEDERGHFLWIARY LGGVPLVYAASVDSYPEDPAAMAALAAWFETREALRNGPAAAQTEVDPSAMAARAQTVAPAAEDLPSDELPSGSVMPGLH EEPAPAPPTTDYVYSVQIGAFINGNYAAERVALLRDAGFDPCTMKLYDKNGQLWNIVQIGDYRDSADAWNRVRDFVKAGT GFDYNIEILDAGVVSRRKQCP >Mature_421_residues MIRFGRLFLLLMLLAALTGCKQDAKNYWKDTRKLYRTYVNTPAALDTDQELDVMPVESKIATVFTAMDEQLEQMRRVLEN QDTFPSDEWVAGFLERFPWVSGVAVVDADGNVLLRQPELELKAYNYAPLLEKDENAPERAMRGYAEANPVGPEFYLANPV FSGREVKGLLVAHFDIRNLLAYSPSPGDIVLVSRDAVLWPGKYVYDQTPLAAVDWSAALKSDVTGEAEDERGHFLWIARY LGGVPLVYAASVDSYPEDPAAMAALAAWFETREALRNGPAAAQTEVDPSAMAARAQTVAPAAEDLPSDELPSGSVMPGLH EEPAPAPPTTDYVYSVQIGAFINGNYAAERVALLRDAGFDPCTMKLYDKNGQLWNIVQIGDYRDSADAWNRVRDFVKAGT GFDYNIEILDAGVVSRRKQCP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46559; Mature: 46559
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRFGRLFLLLMLLAALTGCKQDAKNYWKDTRKLYRTYVNTPAALDTDQELDVMPVESKI CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECHHHH ATVFTAMDEQLEQMRRVLENQDTFPSDEWVAGFLERFPWVSGVAVVDADGNVLLRQPELE HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCE LKAYNYAPLLEKDENAPERAMRGYAEANPVGPEFYLANPVFSGREVKGLLVAHFDIRNLL EEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECHHHHH AYSPSPGDIVLVSRDAVLWPGKYVYDQTPLAAVDWSAALKSDVTGEAEDERGHFLWIARY EECCCCCCEEEEECCCEECCCCEEECCCCCEEECHHHHHHCCCCCCCCCCCCCEEEEHHH LGGVPLVYAASVDSYPEDPAAMAALAAWFETREALRNGPAAAQTEVDPSAMAARAQTVAP HCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC AAEDLPSDELPSGSVMPGLHEEPAPAPPTTDYVYSVQIGAFINGNYAAERVALLRDAGFD CHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHCCCC PCTMKLYDKNGQLWNIVQIGDYRDSADAWNRVRDFVKAGTGFDYNIEILDAGVVSRRKQC CEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHCCC P C >Mature Secondary Structure MIRFGRLFLLLMLLAALTGCKQDAKNYWKDTRKLYRTYVNTPAALDTDQELDVMPVESKI CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECHHHH ATVFTAMDEQLEQMRRVLENQDTFPSDEWVAGFLERFPWVSGVAVVDADGNVLLRQPELE HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCE LKAYNYAPLLEKDENAPERAMRGYAEANPVGPEFYLANPVFSGREVKGLLVAHFDIRNLL EEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECHHHHH AYSPSPGDIVLVSRDAVLWPGKYVYDQTPLAAVDWSAALKSDVTGEAEDERGHFLWIARY EECCCCCCEEEEECCCEECCCCEEECCCCCEEECHHHHHHCCCCCCCCCCCCCEEEEHHH LGGVPLVYAASVDSYPEDPAAMAALAAWFETREALRNGPAAAQTEVDPSAMAARAQTVAP HCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC AAEDLPSDELPSGSVMPGLHEEPAPAPPTTDYVYSVQIGAFINGNYAAERVALLRDAGFD CHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHCCCC PCTMKLYDKNGQLWNIVQIGDYRDSADAWNRVRDFVKAGTGFDYNIEILDAGVVSRRKQC CEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHCCC P C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA