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The map label for this gene is ymbA [C]

Identifier: 78357025

GI number: 78357025

Start: 2026959

End: 2027546

Strand: Reverse

Name: ymbA [C]

Synonym: Dde_1982

Alternate gene names: 78357025

Gene position: 2027546-2026959 (Counterclockwise)

Preceding gene: 78357026

Following gene: 78357013

Centisome position: 54.35

GC content: 55.44

Gene sequence:

>588_bases
ATGAGTGTCTGTTCCGGAGTTTTGCGGGCTTTGTTATGTCTGCTGTTTGCTGCAGGTTTGCTGACAGGTTGTGCGGGAAA
AAGCGCCCCCACGAGATTTTATCTGCTTTCTGCTGATGACGTGCTGCCGGCCGCGGTGCCGCAGGAAGCCCGCGCAGTGC
TGTGGCTGGAAAAGGTCGAAATTCCGCCGTATTTGGATCGTCCGAATATCGTTGTACGCGGAGATGCAGGCCGGATCTAT
CTTGCAGAGTTTGATTACTGGGCTGAGCCGCTGCGTGATTCCATCTCGCGCATGTTGGCCAGAAAACTTGCCGGTGATAC
GAACCGTGCTGTTGTCACAGAAAGCTATGCGGCCGGTGAAGACCGGGTGAAGATTGTCATTTTGCGTTTGGATGCTTCGA
CAGACGGTGATGTGACAATGGAAGCCATGTGGCGGCTGGACAGCGGTGGTGCGGATACCGGGGAGTGGCACTACTTTGTG
AACAGGCTTTCTGCGCAACAGAATAATTACAGCGGATATGTGCAGGCTCACAGCCGCCTGCTGGCGTTGCTGGCAGAAGA
CATCGCGCGCAACGTGCCTGCCATCTGA

Upstream 100 bases:

>100_bases
ACAGGCGCAGCCCGTTCGTTGCGGGTGTGGGCTGATTATCTTGAGCGGCATCCGGAAGCCCTGATCCGGGGCAAAGGTGA
GTACAGGAGGTAGCATGCGT

Downstream 100 bases:

>100_bases
CTCTTTCGTTCTTTTGCCATGTGCATAAAAGCCCGCCGACACCACACCGGCGGGCTTTTATGTTCGGGGAATGGACAGCA
TGCGCAGTCAGCCATTGCTG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MSVCSGVLRALLCLLFAAGLLTGCAGKSAPTRFYLLSADDVLPAAVPQEARAVLWLEKVEIPPYLDRPNIVVRGDAGRIY
LAEFDYWAEPLRDSISRMLARKLAGDTNRAVVTESYAAGEDRVKIVILRLDASTDGDVTMEAMWRLDSGGADTGEWHYFV
NRLSAQQNNYSGYVQAHSRLLALLAEDIARNVPAI

Sequences:

>Translated_195_residues
MSVCSGVLRALLCLLFAAGLLTGCAGKSAPTRFYLLSADDVLPAAVPQEARAVLWLEKVEIPPYLDRPNIVVRGDAGRIY
LAEFDYWAEPLRDSISRMLARKLAGDTNRAVVTESYAAGEDRVKIVILRLDASTDGDVTMEAMWRLDSGGADTGEWHYFV
NRLSAQQNNYSGYVQAHSRLLALLAEDIARNVPAI
>Mature_194_residues
SVCSGVLRALLCLLFAAGLLTGCAGKSAPTRFYLLSADDVLPAAVPQEARAVLWLEKVEIPPYLDRPNIVVRGDAGRIYL
AEFDYWAEPLRDSISRMLARKLAGDTNRAVVTESYAAGEDRVKIVILRLDASTDGDVTMEAMWRLDSGGADTGEWHYFVN
RLSAQQNNYSGYVQAHSRLLALLAEDIARNVPAI

Specific function: Unknown

COG id: COG3009

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21388; Mature: 21256

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVCSGVLRALLCLLFAAGLLTGCAGKSAPTRFYLLSADDVLPAAVPQEARAVLWLEKVE
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHEEEHEEEC
IPPYLDRPNIVVRGDAGRIYLAEFDYWAEPLRDSISRMLARKLAGDTNRAVVTESYAAGE
CCCCCCCCCEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC
DRVKIVILRLDASTDGDVTMEAMWRLDSGGADTGEWHYFVNRLSAQQNNYSGYVQAHSRL
CCEEEEEEEECCCCCCCEEEEHEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
LALLAEDIARNVPAI
HHHHHHHHHHHCCCC
>Mature Secondary Structure 
SVCSGVLRALLCLLFAAGLLTGCAGKSAPTRFYLLSADDVLPAAVPQEARAVLWLEKVE
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHEEEHEEEC
IPPYLDRPNIVVRGDAGRIYLAEFDYWAEPLRDSISRMLARKLAGDTNRAVVTESYAAGE
CCCCCCCCCEEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC
DRVKIVILRLDASTDGDVTMEAMWRLDSGGADTGEWHYFVNRLSAQQNNYSGYVQAHSRL
CCEEEEEEEECCCCCCCEEEEHEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
LALLAEDIARNVPAI
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA