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The map label for this gene is 78357004

Identifier: 78357004

GI number: 78357004

Start: 2009656

End: 2010297

Strand: Direct

Name: 78357004

Synonym: Dde_1961

Alternate gene names: NA

Gene position: 2009656-2010297 (Clockwise)

Preceding gene: 78357003

Following gene: 78357005

Centisome position: 53.87

GC content: 57.01

Gene sequence:

>642_bases
ATGAAAATAAGTCCTTCTCTGGTCTGTCCGCCCTTGTACACGCTATACAAGTTATGGTGTTCCACACTCCGGTATTCCGA
AACCGGCCGGGAAGCAGTGGACGCGCTGTGGAATCAGCGGACTCCCATGGTCTTTGCTCTGTGGCATGACGAGCTGTTTC
CGCTCATGCACATCAAACGCCAGCTGGACATTGTAACGGTTGTCAGCCAGAGCAGAGACGGCGAGTATCTGGCCGGAGTA
CTGCGCAGACTGGGGCTGCGCACCGCGCGGGGCTCAAGCTCGCGCGGAGGAGTTAAAGCTCTGCTTCAGGCATCACGCAT
GATGCGCAATGAAGGCATCTGCGGCTGTGTGACTGTAGACGGCCCGCGCGGACCACGCCATGTGGTGAAAGAAGGGGCGC
TGTTTCTTGCGGCCAGAACGCCCGCGCAGGTGGTTCCTGTGCGCATATTCATGCAACGGCGCAAGGTATTTGAAAAAGCG
TGGGACCAGTTTCAGCTGCCTGTACCGTTCAGCAGCGTCCATATTGTCTTTGGTGAGCCGTATGCACCGCAGGCAACGGC
TACAGACCAGAACATGCTGGCAAGTGCAGCGGCGCAACTGCAGACAAAACTCAACTCCCTGAAGAACCCGTACCATGTTT
GA

Upstream 100 bases:

>100_bases
CGTGCCCGCTGTACACACGTCTGTACAATATGCAGTTTCAGACAGAGCATACAACCGAAGACAACGGTTGTGCACTGCCG
CAGGCATAAAAAGGCGCAGT

Downstream 100 bases:

>100_bases
TTTCGCCTCAGAAAGTGCACTCTTTATCGGTAACAGAATAGGCTTTTCCACGGTTCGCAGATGCGGAAGGGGGCTTGGAA
CGCTGCTGTGGCACATTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MKISPSLVCPPLYTLYKLWCSTLRYSETGREAVDALWNQRTPMVFALWHDELFPLMHIKRQLDIVTVVSQSRDGEYLAGV
LRRLGLRTARGSSSRGGVKALLQASRMMRNEGICGCVTVDGPRGPRHVVKEGALFLAARTPAQVVPVRIFMQRRKVFEKA
WDQFQLPVPFSSVHIVFGEPYAPQATATDQNMLASAAAQLQTKLNSLKNPYHV

Sequences:

>Translated_213_residues
MKISPSLVCPPLYTLYKLWCSTLRYSETGREAVDALWNQRTPMVFALWHDELFPLMHIKRQLDIVTVVSQSRDGEYLAGV
LRRLGLRTARGSSSRGGVKALLQASRMMRNEGICGCVTVDGPRGPRHVVKEGALFLAARTPAQVVPVRIFMQRRKVFEKA
WDQFQLPVPFSSVHIVFGEPYAPQATATDQNMLASAAAQLQTKLNSLKNPYHV
>Mature_213_residues
MKISPSLVCPPLYTLYKLWCSTLRYSETGREAVDALWNQRTPMVFALWHDELFPLMHIKRQLDIVTVVSQSRDGEYLAGV
LRRLGLRTARGSSSRGGVKALLQASRMMRNEGICGCVTVDGPRGPRHVVKEGALFLAARTPAQVVPVRIFMQRRKVFEKA
WDQFQLPVPFSSVHIVFGEPYAPQATATDQNMLASAAAQLQTKLNSLKNPYHV

Specific function: Unknown

COG id: COG2121

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To H.pylori HP0270 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007172
- ProDom:   PD032436 [H]

Pfam domain/function: PF04028 DUF374 [H]

EC number: NA

Molecular weight: Translated: 23895; Mature: 23895

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISPSLVCPPLYTLYKLWCSTLRYSETGREAVDALWNQRTPMVFALWHDELFPLMHIKR
CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHH
QLDIVTVVSQSRDGEYLAGVLRRLGLRTARGSSSRGGVKALLQASRMMRNEGICGCVTVD
HHHHHEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEC
GPRGPRHVVKEGALFLAARTPAQVVPVRIFMQRRKVFEKAWDQFQLPVPFSSVHIVFGEP
CCCCHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEECCC
YAPQATATDQNMLASAAAQLQTKLNSLKNPYHV
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKISPSLVCPPLYTLYKLWCSTLRYSETGREAVDALWNQRTPMVFALWHDELFPLMHIKR
CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHH
QLDIVTVVSQSRDGEYLAGVLRRLGLRTARGSSSRGGVKALLQASRMMRNEGICGCVTVD
HHHHHEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEC
GPRGPRHVVKEGALFLAARTPAQVVPVRIFMQRRKVFEKAWDQFQLPVPFSSVHIVFGEP
CCCCHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEECCC
YAPQATATDQNMLASAAAQLQTKLNSLKNPYHV
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]